Methanobacterium palustre (DSM 3108, NBRC 105230, F)

Name: Methanobacterium palustre (DSM 3108, NBRC 105230, F)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6935

Type strain

Strain Designation F

Culture col. no. DSM 3108 NBRC 105230 F

NCBI tax ID(s) 2171

Special Collections DSMZ

History DSMZ <- H.-P. Zabel, Univ. Regensburg, Germany; F <- G. Zellner and J. Winter;

Links

Methanobacterium palustre F is an anaerobe archaeon that was isolated from peat bog.

anaerobe 16S sequence Archaea

Name and taxonomic classification

SI-ID 47699

NBRC 105230,DSM 3108,ATCC BAA-1077

@ref 20215

Last LPSN update 2026-05-29 08:26:31

Domain Archaea

Phylum Methanobacteriota

Class Methanobacteria

Order Methanobacteriales

Family Methanobacteriaceae

Genus Methanobacterium

Species Methanobacterium palustre

Full scientific name Methanobacterium palustre Zellner et al. 1990

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1305	METHANOBACTERIUM MEDIUM (DSMZ Medium 119)		Medium recipe at MediaDive	Name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119) Composition: NaHCO3 3.98804 g/l Na-formate 1.99402 g/l Na-acetate 0.997009 g/l Na2S x 9 H2O 0.498504 g/l L-Cysteine HCl x H2O 0.498504 g/l KH2PO4 0.498504 g/l NH4Cl 0.398804 g/l NaCl 0.398804 g/l MgSO4 x 7 H2O 0.398804 g/l Yeast extract 0.199402 g/l CaCl2 x 2 H2O 0.0498504 g/l HCl 0.00249252 g/l FeSO4 x 7 H2O 0.00199402 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Isobutyric acid DL-2-Methylbutyric acid Valeric acid Isovaleric acid H2SO4 Sludge Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
1305	positive	growth	37

Physiology and metabolism

Oxygen tolerance

1305

Oxygen toleranceanaerobe

Compound production

1305

Compoundsecondary alcohol dehydrogenase

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Wetland (Swamp)
#Condition	#Acidic	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
1305	peat bog	Kelheim	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1305	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Methanobacterium palustre 16S small subunit ribosomal RNA gene, partial sequence	AF095263	1433		2171
1305	Methanobacterium palustre 16S ribosomal RNA gene, partial sequence	AF093061	1414		2171

GC content

1305

GC-content (mol%)34.0

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Development of a simultaneous bioreactor system for characterization of gas production kinetics of methanogenic archaea at high pressure.	Pappenreiter PA, Zwirtmayr S, Mauerhofer LM, Rittmann SKR, Paulik C.	Eng Life Sci	10.1002/elsc.201900035	2019
Metabolism	Microbial community analysis of a methane-producing biocathode in a bioelectrochemical system.	Van Eerten-Jansen MC, Veldhoen AB, Plugge CM, Stams AJ, Buisman CJ, Ter Heijne A.	Archaea	10.1155/2013/481784	2013
	Characterization of a Methanogenic Community within an Algal Fed Anaerobic Digester.	Ellis JT, Tramp C, Sims RC, Miller CD.	ISRN Microbiol	10.5402/2012/753892	2012

References

#1305	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3108
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Methanobacterium palustre (DSM 3108, NBRC 105230, F)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Compound production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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