Name: Methanobacterium formicicum MS1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6927

Type strain:

Species: Methanobacterium formicicum

Strain Designation: MS1

Culture col. no.: DSM 3636

Strain history: <- G.D. Vogels, MS1

NCBI tax ID(s): 2162 (species)

SI-ID 47735

DSM 3636

Special Collections

DSMZ

Other strains from Methanobacterium formicicum

Section

When using BacDive for research please cite our paper

Methanobacterium formicicum MS1 is an anaerobe, mesophilic archaeon that was isolated from from ciliate Metopus striatus.

anaerobe
mesophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Archaea*
	Phylum	*Methanobacteriota*
	Class	*Methanobacteria*
	Order	*Methanobacteriales*
	Family	*Methanobacteriaceae*
	Genus	*Methanobacterium*
	Species	**Methanobacterium formicicum**
	Full Scientific Name (LPSN)	Methanobacterium formicicum Schnellen 1947 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1426]

Culture medium

MODIFIED METHANOBACTERIUM MEDIUM (DSMZ Medium 1523)

[Ref.: #1426]

Culture medium growth

[Ref.: #1426]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1426]

Culture medium composition

expand / minimize

[Ref.: #1426]

Culture medium

METHANOBACTERIUM MEDIUM (DSMZ Medium 119)

[Ref.: #1426]

Culture medium growth

[Ref.: #1426]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1426]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1426]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1426]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1426]	Sample type/isolated from	from ciliate Metopus striatus
[Ref.: #1426]	Host species	Metopus striatus
[Ref.: #1426]	Country	Netherlands
[Ref.: #1426]	Country ISO 3 Code	NLD
[Ref.: #1426]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Protozoa

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1426]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	M.formicicum (DSM 3636) DNA for 16S ribosomal RNA (partial)	Z29436	965	GenBank ENA	2162 tax ID	*

[Ref.: #1426]

GC-content

38.0 mol%

Availability in culture collections External links

[Ref.: #1426]

Culture collection no.

DSM 3636

[Ref.: #76391]

SI-ID 47735

References

#1426

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3636

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#76391

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47735.1 )

* These data were automatically processed and therefore are not curated

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