[Ref.: #8870] |
Sample type/isolated from |
decaying plant material |
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[Ref.: #46270] |
Sample type/isolated from |
Decaying vegetation |
[Ref.: #46270] |
Country |
USA |
[Ref.: #46270] |
Country ISO 3 Code |
USA |
[Ref.: #46270] |
Continent |
North America |
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[Ref.: #67770] |
Sample type/isolated from |
Decaying vegetation in the United States |
* marker position based on {}
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Isolation sources categories |
#Host |
#Plants |
#Decomposing plant |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #8870] |
Listeria welshimeri partial 16S rRNA gene, type strain CECT 919T |
AJ515519 |
1002 |
|
1643 tax ID |
[Ref.: #20218] |
Listeria welshimeri strain ATCC 35897 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
DQ065846 |
2433 |
|
1643 tax ID |
* |
[Ref.: #20218] |
Listeria welshimeri 16S and 23S ribosomal RNA genes, partial sequence, Ile-tRNA and Ala-tRNA genes, complete sequence |
U57917 |
588 |
|
1643 tax ID |
* |
[Ref.: #20218] |
Listeria welshimeri 16S ribosomal RNA gene, partial sequence, 16S/23S ribosomal RNA intergenic spacer region, complete sequence and 23S ribosomal RNA gene, partial sequence |
U78982 |
334 |
|
1643 tax ID |
* |
[Ref.: #20218] |
L.welshimeri DNA for 16S ribosomal RNA |
X98532 |
1417 |
|
1643 tax ID |
* |
[Ref.: #20218] |
L.welshimeri gene for 16S ribosomal RNA |
X56149 |
1491 |
|
1643 tax ID |
* |
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Genome sequence information: |
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|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Listeria welshimeri serovar 6b str. SLCC5334 complete genome |
AM263198 |
|
|
386043 tax ID |
[Ref.: #66792] |
Listeria welshimeri NCTC11857
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GCA_900187315 |
complete |
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1643 tax ID |
* |
[Ref.: #66792] |
Listeria welshimeri strain NCTC11857 |
1643.7 |
complete |
|
1643 tax ID |
* |
[Ref.: #66792] |
Listeria welshimeri NCTC 11857 |
2773857882 |
complete |
|
1643 tax ID |
* |
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Availability in culture collections
External links
[Ref.: #8870] |
Culture collection no. |
DSM 20650, ATCC 35897, CIP 8149, SLCC 5334, CCUG 15529, CIP 81.49, NCTC 11857, CECT 919, CCM 3971, JCM 32816, BCRC 14851, LMG 11389, NCAIM B.01872 |
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Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Pathogenicity |
Rugulactone and its analogues exert antibacterial effects through multiple mechanisms including inhibition of thiamine biosynthesis. |
Nodwell MB, Menz H, Kirsch SF, Sieber SA |
Chembiochem |
10.1002/cbic.201200265 |
2012 |
* |
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References
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#8870 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20650
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#33529 |
; Curators of the CIP;
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#46270 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 15529
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68371 |
Automatically annotated from API 50CH acid .
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#68376 |
Automatically annotated from API LIST .
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#68379 |
Automatically annotated from API Coryne .
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#68381 |
Automatically annotated from API rID32STR .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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- * These data were automatically processed and therefore are not curated
Change proposal
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