Name: Periweissella ghanensis 215
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6858

Type strain:

Species: Periweissella ghanensis

Strain Designation: 215

Culture col. no.: DSM 19935, LMG 24286

Strain history: <- L. De Vuyst <- N. Camu, Vrije Univ. Brussels, Belgium; 215

NCBI tax ID(s): 467997 (species)

SI-ID 311007

LMG 24286, DSM 19935

Section

Periweissella ghanensis 215 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from fermented cocoa beans.

Gram-positive
rod-shaped
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Periweissella*
	Species	**Periweissella ghanensis**
	Full Scientific Name (LPSN)	Periweissella ghanensis (De Bruyne et al. 2008) Bello et al. 2022

Synonym

Weissella ghanensis

Information on morphological and physiological properties Morphology

[Ref.: #32655]	Gram stain	positive

[Ref.: #32655]	Cell length	02-04 µm

[Ref.: #32655]	Cell width	1 µm

[Ref.: #32655]	Cell shape	rod-shaped

[Ref.: #32655]	Motility	no

[Ref.: #32655]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8395]

Culture medium

PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231)

[Ref.: #8395]

Culture medium growth

[Ref.: #8395]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8395]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8395]	growth	30 °C
[Ref.: #32655]	growth	15-37 °C
[Ref.: #32655]	optimum	15-37 °C

[Ref.: #8395]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #32655]			optimum	3.9
[Ref.: #32655]			growth	3.9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8395]	Oxygen tolerance	microaerophile
[Ref.: #32655]	Oxygen tolerance	facultative anaerobe

[Ref.: #32655]

Ability of spore formation

[Ref.: #32655]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32655]	cellobiose ChEBI	+	carbon source
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #32655]	fructose ChEBI	+	carbon source
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #32655]	glucose ChEBI	+	carbon source
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #32655]	maltose ChEBI	+	carbon source
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #32655]	mannose ChEBI	+	carbon source
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #32655]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #32655]	salicin ChEBI	+	carbon source
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #32655]	trehalose ChEBI	+	carbon source
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #8395]	14416	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	+/-	+/-	+	-	+	+	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8395]	Sample type/isolated from	fermented cocoa beans
[Ref.: #8395]	Geographic location (country and/or sea, region)	Ghana
[Ref.: #8395]	Country	Ghana
[Ref.: #8395]	Country ISO 3 Code	GHA
[Ref.: #8395]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	-
#Host Body-Site	#Plant	#Fruit (Seed)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM882997 (>99% sequence identity) for Weissella from Microbeatlas

Aquatic Samples	291
Soil Samples	139
Animal Samples	1457
Plant Samples	299
Total Samples	2186

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8395]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8395]	Weissella ghanensis partial 16S rRNA gene, type strain LMG 24286T	AM882997	1541	ENA	467997 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Periweissella ghanensis DSM 19935	GCA_023657365	contig	GenBank	467997 tax ID	*
[Ref.: #66792]	Periweissella ghanensis LMG 24286 substr. LMG 24286	GCA_918814755	contig	GenBank	467997 tax ID	*
[Ref.: #66792]	Weissella ghanensis strain LMG 24286	467997.5	wgs	PATRIC	467997 tax ID	*

[Ref.: #8395]

GC-content

40 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Weissella ghanensis strain LMG 24286 PATRIC: 467997.5
[Ref.: #69480]	gram-positive	yes	93.3	yes
[Ref.: #69480]	anaerobic	no	86.092	no
[Ref.: #69480]	halophile	yes	80.518	no
[Ref.: #69480]	spore-forming	no	90.254	no
[Ref.: #69480]	glucose-util	yes	88.108	yes
[Ref.: #69480]	aerobic	no	93.907	yes
[Ref.: #69480]	flagellated	no	92.782	yes
[Ref.: #69480]	thermophile	no	99.204	yes
[Ref.: #69480]	motile	no	80.816	yes
[Ref.: #69480]	glucose-ferment	yes	86.158	no

Availability in culture collections External links

[Ref.: #8395]

Culture collection no.

DSM 19935, LMG 24286

[Ref.: #76323]

SI-ID 311007

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Weissella cryptocerci sp. nov., isolated from gut of the insect Cryptocercus kyebangensis.	Heo J, Hamada M, Cho H, Weon HY, Kim JS, Hong SB, Kim SJ, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijsem.0.003564	2019	*
Phylogeny	Weissella beninensis sp. nov., a motile lactic acid bacterium from submerged cassava fermentations, and emended description of the genus Weissella.	Padonou SW, Schillinger U, Nielsen DS, Franz CMAP, Hansen M, Hounhouigan JD, Nago MC, Jakobsen M	Int J Syst Evol Microbiol	10.1099/ijs.0.014332-0	2009	*
Phylogeny	Weissella fabaria sp. nov., from a Ghanaian cocoa fermentation.	De Bruyne K, Camu N, De Vuyst L, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.019323-0	2009	*
Phylogeny	Weissella ghanensis sp. nov., isolated from a Ghanaian cocoa fermentation.	De Bruyne K, Camu N, Lefebvre K, De Vuyst L, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.65853-0	2008	*

References

#8395

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19935

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32655

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28866 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68371

Automatically annotated from API 50CH acid .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76323

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID311007.1 )

#28866

IJSEM 2721 2008 ( DOI 10.1099/ijs.0.65853-0 , PubMed 19060047 )

* These data were automatically processed and therefore are not curated

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Weissella ghanensis strain LMG 24286

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