Weissella thailandensis (DSM 15832, HSCC 1412, JCM 10695)

Name: Weissella thailandensis (DSM 15832, HSCC 1412, JCM 10695)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6855

Type strain

Strain Designation FS61-1

Culture col. no. DSM 15832 HSCC 1412 JCM 10695 NRIC 0298 TISTR 1384 6 more

NCBI tax ID(s) 89061

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- JCM <- S. Tanasupawat; FS61-1 JCM <-- S. Tanasupawat FS61-1. KCTC <- JCM <- S Tanasupawat, FS61-1 CIP <- 2000, S. Tanasupawat, Bangkok, Thailand: strain FS61-1

Links

Weissella thailandensis FS61-1 is a microaerophile, coccus-shaped bacterium that was isolated from fermented fish.

coccus-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14973

LMG 19821,JCM 10695,KCTC 3751,TISTR 1384,NBRC-109621,CIP 106751,CCUG 46557,DSM 15832,CECT 7052

@ref 20215

Last LPSN update 2026-05-29 08:26:30

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Weissella

Species Weissella thailandensis

Full scientific name Weissella thailandensis Tanasupawat et al. 2000

Synonyms (1)

Weissella jogaejeotgali

BacDive ID	Other strains from **Weissella thailandensis** (2)	Type strain
132289	W. thailandensis FOL01, DSM 103409, JCM 30580, KCCM 43128, ...
153767	W. thailandensis CCUG 50906

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
67771		coccus-shaped
67771	positive
123495	positive	oval-shaped
125438			92
125438	positive		95.667

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6046	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
38646	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
123495	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6046	positive	growth	30
38646	positive	growth	30
57263	positive	growth	30-37
67770	positive	growth	30
67771	positive	growth	30
123495	positive	growth	22-37
123495	negative	growth	10
123495	negative	growth	15
123495	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
6046	microaerophile
57263	aerobe
57263	anaerobe
67771	microaerophile
123495	facultative anaerobe
125439	facultative anaerobe	95.799

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123495	NaCl	positive	growth	10 %

Murein

@ref	Murein short key	Type
6046	A11.05	A3alpha L-Lys-L-Ala₂

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
123495	17632 ChEBI	nitrate	-	reduction
123495	17632 ChEBI	nitrate	+	respiration
123495	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123495	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
123495	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123495	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123495	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
123495	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123495	ornithine decarboxylase	-	4.1.1.17
123495	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123495	-	-	+	+	-	-	-	-	-	-	+	+	+	+	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123495	not determinedn.d.	-	-	-	+/-	+/-	-	-	-	-	+/-	+/-	+/-	+/-	-	+/-	-	-	-	-	-	+/-	-	-	-	-	-	-	+/-	-	+/-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Seafood
#Host	#Fishes	-
#Engineered	#Food production	#Fermented

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
6046	fermented fish	Chiangmai	Thailand	THA	Asia
67770	Fermented fish
67771	From fermented fish	Chiangmai	Thailand	THA	Asia
123495	Fermented fish		Thailand	THA	Asia	1996

Taxonmaps

69479

Global distribution of 16S sequence LC097077 (>99% sequence identity) for Weissella from Microbeatlas

Aquatic Samples	1125
Soil Samples	1853
Animal Samples	11172
Plant Samples	765
Total Samples	14915

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6046	1	Risk group (German classification) According to TRBA 466
123495	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67771	ASM1239638v1 assembly for Weissella thailandensis CCUG 46557	contig	GCA_012396385	89061.6		89061	71.2
67771	ASM540546v1 assembly for Weissella thailandensis JCM 10695	scaffold	GCA_005405465	89061.4	8110908146	89061	69.29
67770	ASM799257v1 assembly for Weissella thailandensis NBRC 109621	contig	GCA_007992575	89061.5		89061	66.2
67771	ASM336325v1 assembly for Weissella thailandensis KCTC 3751	contig	GCA_003363255	89061.3	2849979616	89061	64.75

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
6046	Weissella thailandensis gene for 16S rRNA, partial sequence, strain:FS61-1T	AB023838	1417	89061
67771	Weissella thailandensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 10695	LC097077	1511	89061
124043	Weissella thailandensis strain PCU 210 16S ribosomal RNA gene, partial sequence.	MT760016	785	89061
124043	Weissella thailandensis strain PCU 210 16S ribosomal RNA gene, partial sequence.	MT758136	785	89061

GC content

@ref	GC-content (mol%)	Method
6046	38
67770	41.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1239638v1 assembly for Weissella thailandensis CCUG 46557
BV-BRC: 89061.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	95.80	no
125439	gram_stain	BacteriaNetⓘ	positive	82.76	no
125439	motility	BacteriaNetⓘ	no	82.05	no
125439	spore_formation	BacteriaNetⓘ	no	88.25	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Weissella thailandensis strain CCUG 46557
PATRIC: 89061.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	95.67	yes
125438	anaerobic	anaerobicⓘ	no	85.63	no
125438	aerobic	aerobicⓘ	no	93.35	no
125438	spore-forming	spore-formingⓘ	no	88.24	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	92.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Genome-based reclassification of Weissella jogaejeotgali as a later heterotypic synonym of Weissella thailandensis.	Kwak MJ, Choi SB, Kim BY, Chun J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003315	2019
Genetics	Comparative genomic analysis of the genus Weissella and taxonomic study of Weissella fangxianensis sp. nov., isolated from Chinese rice wine starter.	Xiang F, Dong Y, Cai W, Zhao H, Liu H, Shan C, Guo Z.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005870	2023
Phylogeny	Weissella jogaejeotgali sp. nov., isolated from jogae jeotgal, a traditional Korean fermented seafood.	Lee SH, Ku HJ, Ahn MJ, Hong JS, Lee SH, Shin H, Lee KC, Lee JS, Ryu S, Jeon CO, Lee JH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000631	2015
Phylogeny	Lactobacillus acidipiscis sp. nov. and Weissella thailandensis sp. nov., isolated from fermented fish in Thailand.	Tanasupawat S, Shida O, Okada S, Komagata K	Int J Syst Evol Microbiol	10.1099/00207713-50-4-1479	2000

References

#6046	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15832
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38646	; Curators of the CIP;
#57263	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 46557
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123495	Collection of Institut Pasteur ; Curators of the CIP; CIP 106751
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Weissella thailandensis (DSM 15832, HSCC 1412, JCM 10695)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Murein

Metabolite utilization

Antibiotic resistance

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_012396385

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media