Name: Weissella thailandensis FS61-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6855

Type strain:

Species: Weissella thailandensis

Strain Designation: FS61-1

Culture col. no.: DSM 15832, HSCC 1412, JCM 10695, NRIC 0298, TISTR 1384, CCUG 46557, CIP 106751, KCTC 3751, PCU 210, NBRC 109621

Strain history: CIP <- 2000, S. Tanasupawat, Bangkok, Thailand: strain FS61-1

NCBI tax ID(s): 89061 (species)

SI-ID 14973

LMG 19821, JCM 10695, KCTC 3751, TISTR 1384, CIP 106751, CCUG 46557, DSM 15832, CECT 7052

Other strains from Weissella thailandensis

W. thailandensis FOL01, DSM 103409, JCM 30580, KCCM ...
W. thailandensis CCUG 50906

Section

Weissella thailandensis FS61-1 is a microaerophile, mesophilic, coccus-shaped bacterium that was isolated from fermented fish.

coccus-shaped
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Weissella*
	Species	**Weissella thailandensis**
	Full Scientific Name (LPSN)	Weissella thailandensis Tanasupawat et al. 2000

Synonym

Weissella jogaejeotgali

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive
[Ref.: #123495]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #123495]	Cell shape	oval-shaped
[Ref.: #67771]	Cell shape	coccus-shaped

[Ref.: #123495]	Motility	no
[Ref.: #67771]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %97.375

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6046]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #6046]

Culture medium growth

[Ref.: #6046]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6046]

Culture medium composition

expand / minimize

[Ref.: #38646]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #38646]

Culture medium growth

[Ref.: #38646]

Culture medium composition

expand / minimize

[Ref.: #123495]

Culture medium

CIP Medium 40

[Ref.: #123495]

Culture medium growth

[Ref.: #123495]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #6046]		growth	30 °C
[Ref.: #38646]		growth	30 °C
[Ref.: #57263]		growth	30-37 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #67771]		growth	30 °C
[Ref.: #123495]		growth	22-37 °C
[Ref.: #123495]	no	growth	10 °C
[Ref.: #123495]	no	growth	15 °C
[Ref.: #123495]	no	growth	45 °C

[Ref.: #6046]	Temperature range	mesophilic
[Ref.: #38646]	Temperature range	mesophilic
[Ref.: #57263]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic
[Ref.: #123495]	Temperature range	psychrophilic
[Ref.: #123495]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #6046]	Oxygen tolerance	microaerophile
[Ref.: #57263]	Oxygen tolerance	aerobe
[Ref.: #57263]	Oxygen tolerance	anaerobe
[Ref.: #67771]	Oxygen tolerance	microaerophile
[Ref.: #123495]	Oxygen tolerance	facultative anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #123495]		NaCl		growth	10	%

[Ref.: #6046]	Murein short key	A11.05
[Ref.: #6046]	Murein types	A3alpha L-Lys-L-Ala₂

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123495]	nitrate ChEBI	-	reduction
[Ref.: #123495]	nitrate ChEBI	+	respiration
[Ref.: #123495]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #123495]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #123495]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #123495]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123495]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #123495]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123495]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #123495]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #123495]	10703	not determinedn.d.	-	-	-	+/-	+/-	-	-	-	-	+/-	+/-	+/-	+/-	-	+/-	-	-	-	-	-	+/-	-	-	-	-	-	-	+/-	-	+/-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123495]	9778	-	-	+	+	-	-	-	-	-	-	+	+	+	+	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6046]	Sample type/isolated from	fermented fish
[Ref.: #6046]	Geographic location (country and/or sea, region)	Chiangmai
[Ref.: #6046]	Country	Thailand
[Ref.: #6046]	Country ISO 3 Code	THA
[Ref.: #6046]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Fermented fish

[Ref.: #67771]	Sample type/isolated from	From fermented fish
[Ref.: #67771]	Geographic location (country and/or sea, region)	Chiangmai
[Ref.: #67771]	Country	Thailand
[Ref.: #67771]	Country ISO 3 Code	THA
[Ref.: #67771]	Continent	Asia

[Ref.: #123495]	Sample type/isolated from	Fermented fish
[Ref.: #123495]	Country	Thailand
[Ref.: #123495]	Country ISO 3 Code	THA
[Ref.: #123495]	Continent	Asia
[Ref.: #123495]	Isolation date	1996
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Seafood
#Host	#Fishes	-
#Engineered	#Food production	#Fermented

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC097077 (>99% sequence identity) for Weissella from Microbeatlas

Aquatic Samples	1125
Soil Samples	1853
Animal Samples	11172
Plant Samples	765
Total Samples	14915

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6046]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123495]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67771]	Weissella thailandensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 10695	LC097077	1511	ENA	89061 tax ID
[Ref.: #6046]	Weissella thailandensis gene for 16S rRNA, partial sequence, strain:FS61-1T	AB023838	1417	ENA	89061 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67771]	Weissella thailandensis CCUG 46557	GCA_012396385	contig	GenBank	89061 tax ID
[Ref.: #67771]	Weissella thailandensis KCTC 3751	GCA_003363255	contig	GenBank	89061 tax ID
[Ref.: #67770]	Weissella thailandensis NBRC 109621	GCA_007992575	contig	GenBank	89061 tax ID
[Ref.: #67771]	Weissella thailandensis JCM 10695	GCA_005405465	scaffold	GenBank	89061 tax ID
[Ref.: #66792]	Weissella thailandensis strain KCTC 3751	89061.3	wgs	PATRIC	89061 tax ID	*
[Ref.: #66792]	Weissella thailandensis strain NBRC 109621	89061.5	wgs	PATRIC	89061 tax ID	*

[Ref.: #6046]	GC-content	38 mol%
[Ref.: #67770]	GC-content	41.2 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Weissella thailandensis JCM 10695 NCBI: GCA_005405465.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Weissella thailandensis strain CCUG 46557 PATRIC: 89061.6
[Ref.: #69480]	motile	no	96.226	yes
[Ref.: #69480]	flagellated	no	98.845	yes
[Ref.: #69480]	gram-positive	yes	97.427	no
[Ref.: #69480]	anaerobic	no	94.305	no
[Ref.: #69480]	halophile	yes	97.876	no
[Ref.: #69480]	spore-forming	no	97.26	no
[Ref.: #69480]	thermophile	no	99.752	no
[Ref.: #69480]	glucose-util	yes	89.022	no
[Ref.: #69480]	aerobic	no	94.344	no
[Ref.: #69480]	glucose-ferment	yes	91.768	no

Availability in culture collections External links

[Ref.: #6046]

Culture collection no.

DSM 15832, HSCC 1412, JCM 10695, NRIC 0298, TISTR 1384, CCUG 46557, CIP 106751, KCTC 3751, PCU 210, NBRC 109621

[Ref.: #76320]

SI-ID 14973

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Genome-based reclassification of Weissella jogaejeotgali as a later heterotypic synonym of Weissella thailandensis.	Kwak MJ, Choi SB, Kim BY, Chun J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003315	2019	*
Phylogeny	Weissella jogaejeotgali sp. nov., isolated from jogae jeotgal, a traditional Korean fermented seafood.	Lee SH, Ku HJ, Ahn MJ, Hong JS, Lee SH, Shin H, Lee KC, Lee JS, Ryu S, Jeon CO, Lee JH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000631	2015	*
Phylogeny	Lactobacillus acidipiscis sp. nov. and Weissella thailandensis sp. nov., isolated from fermented fish in Thailand.	Tanasupawat S, Shida O, Okada S, Komagata K	Int J Syst Evol Microbiol	10.1099/00207713-50-4-1479	2000	*

References

#6046

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15832

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#38646 ; Curators of the CIP;
#57263 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 46557

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#76320

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID14973.1 )

#123495 Collection of Institut Pasteur ; Curators of the CIP; CIP 106751
* These data were automatically processed and therefore are not curated

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Search for species Weissella thailandensis in external resources:
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Weissella thailandensis JCM 10695

Weissella thailandensis strain CCUG 46557

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