Weissella viridescens S38A is a facultative anaerobe, Gram-positive, rod-shaped bacterium that was isolated from cured meat products.
Gram-positive rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Weissella |
| Species Weissella viridescens |
| Full scientific name Weissella viridescens (Niven and Evans 1957) Collins et al. 1994 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8796 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 41868 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 123861 | CIP Medium 40 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 91.187 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8796 | A11.13 | A3alpha L-Lys-L-Ala-L-Ser |
| 67770 | ObservationAssay of Thiamine |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 123861 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 123861 | 17632 ChEBI | nitrate | - | reduction | |
| 123861 | 17632 ChEBI | nitrate | + | respiration | |
| 123861 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 123861 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Metabolite | Production | |
|---|---|---|---|
| 123861 | polysaccharides |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 123861 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 123861 | caseinase | - | 3.4.21.50 | |
| 123861 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 123861 | gelatinase | - | ||
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 123861 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 123861 | ornithine decarboxylase | - | 4.1.1.17 | |
| 123861 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | teichoic acid biosynthesis | 100 | 1 of 1 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | peptidoglycan biosynthesis | 93.33 | 14 of 15 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | ||
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | photosynthesis | 71.43 | 10 of 14 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | purine metabolism | 64.89 | 61 of 94 | ||
| 66794 | glycolysis | 64.71 | 11 of 17 | ||
| 66794 | pyrimidine metabolism | 64.44 | 29 of 45 | ||
| 66794 | pentose phosphate pathway | 63.64 | 7 of 11 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | NAD metabolism | 61.11 | 11 of 18 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | threonine metabolism | 60 | 6 of 10 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | valine metabolism | 55.56 | 5 of 9 | ||
| 66794 | non-pathway related | 55.26 | 21 of 38 | ||
| 66794 | lipid metabolism | 51.61 | 16 of 31 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | gluconeogenesis | 50 | 4 of 8 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | isoleucine metabolism | 50 | 4 of 8 | ||
| 66794 | tetrahydrofolate metabolism | 50 | 7 of 14 | ||
| 66794 | degradation of sugar alcohols | 50 | 8 of 16 | ||
| 66794 | flavin biosynthesis | 46.67 | 7 of 15 | ||
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | ||
| 66794 | vitamin B1 metabolism | 46.15 | 6 of 13 | ||
| 66794 | oxidative phosphorylation | 46.15 | 42 of 91 | ||
| 66794 | serine metabolism | 44.44 | 4 of 9 | ||
| 66794 | d-mannose degradation | 44.44 | 4 of 9 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | glutathione metabolism | 42.86 | 6 of 14 | ||
| 66794 | ubiquinone biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | methionine metabolism | 42.31 | 11 of 26 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of pentoses | 39.29 | 11 of 28 | ||
| 66794 | glutamate and glutamine metabolism | 35.71 | 10 of 28 | ||
| 66794 | arginine metabolism | 33.33 | 8 of 24 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 33.33 | 4 of 12 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | L-lactaldehyde degradation | 33.33 | 1 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | alanine metabolism | 31.03 | 9 of 29 | ||
| 66794 | lysine metabolism | 30.95 | 13 of 42 | ||
| 66794 | urea cycle | 30.77 | 4 of 13 | ||
| 66794 | sulfate reduction | 30.77 | 4 of 13 | ||
| 66794 | Entner Doudoroff pathway | 30 | 3 of 10 | ||
| 66794 | starch degradation | 30 | 3 of 10 | ||
| 66794 | propionate fermentation | 30 | 3 of 10 | ||
| 66794 | tryptophan metabolism | 28.95 | 11 of 38 | ||
| 66794 | citric acid cycle | 28.57 | 4 of 14 | ||
| 66794 | cysteine metabolism | 27.78 | 5 of 18 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | proline metabolism | 27.27 | 3 of 11 | ||
| 66794 | metabolism of disaccharids | 27.27 | 3 of 11 | ||
| 66794 | vitamin B6 metabolism | 27.27 | 3 of 11 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | glycogen biosynthesis | 25 | 1 of 4 | ||
| 66794 | dTDPLrhamnose biosynthesis | 25 | 2 of 8 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | phenylpropanoid biosynthesis | 23.08 | 3 of 13 | ||
| 66794 | leucine metabolism | 23.08 | 3 of 13 | ||
| 66794 | ascorbate metabolism | 22.73 | 5 of 22 | ||
| 66794 | molybdenum cofactor biosynthesis | 22.22 | 2 of 9 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | arachidonic acid metabolism | 22.22 | 4 of 18 | ||
| 66794 | tyrosine metabolism | 21.43 | 3 of 14 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8796 | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8796 | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Global distribution of 16S sequence LC065037 (>99% sequence identity) for Weissella from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM143735v1 assembly for Weissella viridescens DSM 20410 | scaffold | 1629 | 71.11 | ||||
| 67770 | Wvi assembly for Weissella viridescens NCDO 1655 | scaffold | 1629 | 27.41 | ||||
| 67770 | 54984_H01 assembly for Weissella viridescens NCTC13645 | contig | 1629 | 6.01 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus plantarum ATCC 12706 16S ribosomal RNA gene, partial sequence | AF429488 | 507 | 1590 | ||
| 20218 | Lactobacillus plantarum strain ATCC 12706 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF429575 | 517 | 1590 | ||
| 20218 | Lactobacillus viridescens gene for 16S ribosomal RNA, partial sequence | D31699 | 229 | 1629 | ||
| 20218 | Lactobacillus viridescens 16S ribosomal RNA | X52568 | 1515 | 1629 | ||
| 20218 | Weissella viridescens DNA for 16S ribosomal RNA, strain NRIC 1536 | AB023236 | 1479 | 1629 | ||
| 67770 | Weissella viridescens gene for 16S ribosomal RNA, partial sequence, strain: JCM 1174 | LC065037 | 1479 | 1629 | ||
| 67770 | L.viridescens 16S small subunit ribosomal RNA | M23040 | 1582 | 1629 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 96.93 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 54.09 | no |
| 125439 | motility | BacteriaNetⓘ | no | 69.99 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 70.91 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 96.31 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 85.84 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 91.19 | no |
| 125438 | aerobic | aerobicⓘ | no | 93.89 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 96.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 92.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Bis-Thiourea Quaternary Ammonium Salts as Potential Agents against Bacterial Strains from Food and Environmental Matrices. | Bonomo MG, Giura T, Salzano G, Longo P, Mariconda A, Catalano A, Iacopetta D, Ceramella J, Sinicropi MS, Saturnino C. | Antibiotics (Basel) | 10.3390/antibiotics10121466 | 2021 | ||
| Proteolytic Lactococcus lactis and Lipolytic Enterococcus durans of Dairy Origin as Meat Functional Starter Cultures. | Mrkonjic Fuka M, Kos I, Maksimovic AZ, Bacic M, Tanuwidjaja I. | Food Technol Biotechnol | 10.17113/ftb.59.01.21.6872 | 2021 | ||
| The survival rate and efficiency of non-encapsulated and encapsulated native starter cultures to improve the quality of artisanal game meat sausages. | Mrkonjic Fuka M, Zgomba Maksimovic A, Hulak N, Kos I, Marusic Radovcic N, Juric S, Tanuwidjaja I, Karolyi D, Vincekovic M. | J Food Sci Technol | 10.1007/s13197-020-04587-z | 2021 | ||
| Genetics | Probiotic Potential and Safety Assessment of Type Strains of Weissella and Periweissella Species. | Fanelli F, Montemurro M, Verni M, Garbetta A, Bavaro AR, Chieffi D, Cho GS, Franz CMAP, Rizzello CG, Fusco V. | Microbiol Spectr | 10.1128/spectrum.03047-22 | 2023 | |
| Aerococci and carnobacteria cause discoloration in cooked cured bologna | Peirson MD, Guan TY, Holley RA. | Food Microbiol | 10.1016/s0740-0020(02)00126-0 | 2003 | ||
| Enzymology | Structure-based site-directed mutagenesis of the UDP-MurNAc-pentapeptide-binding cavity of the FemX alanyl transferase from Weissella viridescens. | Maillard AP, Biarrotte-Sorin S, Villet R, Mesnage S, Bouhss A, Sougakoff W, Mayer C, Arthur M. | J Bacteriol | 10.1128/jb.187.11.3833-3838.2005 | 2005 | |
| The genus Weissella: taxonomy, ecology and biotechnological potential. | Fusco V, Quero GM, Cho GS, Kabisch J, Meske D, Neve H, Bockelmann W, Franz CM. | Front Microbiol | 10.3389/fmicb.2015.00155 | 2015 | ||
| Metabolism | Idiosyncratic features in tRNAs participating in bacterial cell wall synthesis. | Villet R, Fonvielle M, Busca P, Chemama M, Maillard AP, Hugonnet JE, Dubost L, Marie A, Josseaume N, Mesnage S, Mayer C, Valery JM, Etheve-Quelquejeu M, Arthur M. | Nucleic Acids Res | 10.1093/nar/gkm778 | 2007 | |
| Metabolism | Identification of the UDP-MurNAc-pentapeptide:L-alanine ligase for synthesis of branched peptidoglycan precursors in Enterococcus faecalis. | Bouhss A, Josseaume N, Allanic D, Crouvoisier M, Gutmann L, Mainardi JL, Mengin-Lecreulx D, van Heijenoort J, Arthur M. | J Bacteriol | 10.1128/jb.183.17.5122-5127.2001 | 2001 | |
| Metabolism | A putative amino acid transporter determines sensitivity to the two-peptide bacteriocin plantaricin JK. | Oppegard C, Kjos M, Veening JW, Nissen-Meyer J, Kristensen T. | Microbiologyopen | 10.1002/mbo3.363 | 2016 | |
| Nucleotide sequence of 16S ribosomal RNA from Lactobacillus viridescens and Lactobacillus confusus. | Martinez-Murcia AJ, Collins MD. | Nucleic Acids Res | 10.1093/nar/18.11.3402 | 1990 | ||
| Phylogeny | Some slime-forming heterofermentative species of the genus Lactobacillus. | Sharpe ME, Garvie EI, Tilbury RH. | Appl Microbiol | 10.1128/am.23.2.389-397.1972 | 1972 | |
| Metabolism | Isolation of lactic acid bacteria capable of reducing environmental alkyl and fatty acid hydroperoxides, and the effect of their oral administration on oxidative-stressed nematodes and rats. | Watanabe A, Yamaguchi T, Murota K, Ishii N, Terao J, Okada S, Tanaka N, Kimata S, Abe A, Suzuki T, Uchino M, Niimura Y. | PLoS One | 10.1371/journal.pone.0215113 | 2020 | |
| Pathogenicity | Biological activities and structural properties of the atypical bacteriocins mesenterocin 52b and leucocin b-ta33a. | Corbier C, Krier F, Mulliert G, Vitoux B, Revol-Junelles AM. | Appl Environ Microbiol | 10.1128/aem.67.4.1418-1422.2001 | 2001 | |
| Antimicrobial Effect of Simira ecuadorensis Extracts and Their Impact on Improving Shelf Life in Chicken and Fish Products. | Reyes JF, Diez AM, Melero B, Rovira J, Jaime I. | Foods | 10.3390/foods11152352 | 2022 | ||
| Metabolism | Biochemical and genetic characterization of mundticin KS, an antilisterial peptide produced by Enterococcus mundtii NFRI 7393. | Kawamoto S, Shima J, Sato R, Eguchi T, Ohmomo S, Shibato J, Horikoshi N, Takeshita K, Sameshima T. | Appl Environ Microbiol | 10.1128/aem.68.8.3830-3840.2002 | 2002 | |
| Genetics | Whole-genome sequencing of mutants with increased resistance against the two-peptide bacteriocin plantaricin JK reveals a putative receptor and potential docking site. | Ekblad B, Nissen-Meyer J, Kristensen T | PLoS One | 10.1371/journal.pone.0185279 | 2017 | |
| Metabolism | Production of Antilisterial Bacteriocins from Lactic Acid Bacteria in Dairy-Based Media: A Comparative Study. | Unlu G, Nielsen B, Ionita C | Probiotics Antimicrob Proteins | 10.1007/s12602-015-9200-z | 2015 | |
| Biotechnology | A novel real-time PCR assay for the specific identification and quantification of Weissella viridescens in blood sausages. | Gomez-Rojo EM, Romero-Santacreu L, Jaime I, Rovira J | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2015.08.002 | 2015 | |
| Pathogenicity | Thermal resistances and lactate and diacetate sensitivities of bacteria causing bologna discolouration. | Peirson MD, Guan TY, Holley RA | Int J Food Microbiol | 10.1016/s0168-1605(02)00548-2 | 2003 | |
| Metabolism | Nucleotide sequence of Lactobacillus viridescens 5S RNA. | Alexander LJ, Stewart TS | Nucleic Acids Res | 10.1093/nar/8.5.979 | 1980 | |
| Phylogeny | Weissella uvarum sp. nov., isolated from wine grapes. | Nisiotou A, Dourou D, Filippousi ME, Banilas G, Tassou C | Int J Syst Evol Microbiol | 10.1099/ijs.0.066209-0 | 2014 | |
| Phylogeny | Weissella ceti sp. nov., isolated from beaked whales (Mesoplodon bidens). | Vela AI, Fernandez A, Bernaldo de Quiros Y, Herraez P, Dominguez L, Fernandez-Garayzabal JF | Int J Syst Evol Microbiol | 10.1099/ijs.0.028522-0 | 2011 |
| #8796 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20410 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41868 | ; Curators of the CIP; |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123861 | Collection of Institut Pasteur ; Curators of the CIP; CIP 102810 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive6849.20260601.11
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BacDive in 2025: the core database for prokaryotic strain data