Oenococcus oeni Baudry 1 | Type strain | DSM 20252, ATCC 23279, NCDO 1674, JCM 6125, BCRC 14062, CCUG 30067, CCUG 30199, CCUG 32250, CECT 217, CIP 106144, KCTC 3072, LMG 9851, NBRC 100497, NCIMB 11648, NRIC 1543, NRRL B-3472, VTT E-97832 | BacDiveID:6810

Strain identifier

BacDive ID: 6810

Type strain:

Species: Oenococcus oeni

Strain Designation: Baudry 1

Culture col. no.: DSM 20252, ATCC 23279, NCDO 1674, JCM 6125, BCRC 14062, CCUG 30067, CCUG 30199, CCUG 32250, CECT 217, CIP 106144, KCTC 3072, LMG 9851, NBRC 100497, NCIMB 11648, NRIC 1543, NRRL B-3472, VTT E-97832

Strain history: ATCC 23279 <-- NCDO 1674 <-- E. Peynaud (Baudry 1).

NCBI tax ID(s): 1122618 (strain), 1247 (species)

Other strains from Oenococcus oeni

O. oeni 1, 6, St. Caprais, DSM 20255, NCDO ...
O. oeni 45b, DSM 20257, NCDO 1696
O. oeni CIP 105837, NCIMB 701707, NCDO ...

Section

Oenococcus oeni Baudry 1 is a mesophilic bacterium that was isolated from wine.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Leuconostocaceae*
	Genus	*Oenococcus*
	Species	**Oenococcus oeni**
	Full Scientific Name (LPSN)	Oenococcus oeni (Garvie 1967) Dicks et al. 1995

	Synonym	Leuconostoc oeni
	Synonym	Leuconostoc oenos

Information on morphological and physiological properties Morphology

Multimedia content

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

LEUCONOSTOC OENOS MEDIUM (DSMZ Medium 59)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

MEDIUM 292 - for Oenococcus oeni

Culture medium growth

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8662]			growth	30 °C
[Ref.: #40293]			growth	22 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #8662]	Temperature range	mesophilic
[Ref.: #40293]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8662]	Murein short key	A11.18
[Ref.: #8662]	Murein types	A3alpha L-Lys-L-Ser-L-Ala

Observation

Assay of Tomato juice factor

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8662]	Sample type/isolated from	wine

[Ref.: #67770]	Sample type/isolated from	Wine
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Beverage
#Engineered	#Food production	#Fermented
#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Fruit (Seed)

What are isolation sources categories?

Global distribution of 16S sequence LC071842 (>99% sequence identity) for Oenococcus oeni subclade from Microbeatlas

Aquatic Samples	173
Soil Samples	380
Animal Samples	1270
Plant Samples	170
Total Samples	1993

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

Biosafety level

1

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Oenococcus oeni gene for 16S ribosomal RNA, partial sequence, strain: JCM 6125	LC071842	1506	ENA	1247 tax ID
[Ref.: #67770]	L.oenos 16S small subunit ribosomal RNA	M35820	1510	ENA	1247 tax ID
[Ref.: #20218]	Oenococcus oeni gene for 16S rRNA, strain:JCM 6125	AB022924	1471	ENA	1247 tax ID	*
[Ref.: #20218]	Oenococcus oeni gene for 16S rRNA, partial sequence, strain: JCM 6125	AB596939	1486	ENA	1247 tax ID	*
[Ref.: #20218]	Oenococcus oeni gene for 16S rRNA, partial sequence, strain: NBRC 100497	AB681195	1489	ENA	1247 tax ID	*
[Ref.: #20218]	Leuconostoc oenos gene for 16S ribosomal RNA, partial sequence	D31673	208	ENA	1247 tax ID	*
[Ref.: #20218]	O.oeni 16S ribosomal RNA	X95980	1335	ENA	1247 tax ID	*
[Ref.: #20218]	L.oenos DNA for 16S-23S intergenic spacer region	X90455	495	ENA	1247 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Oenococcus oeni DSM 20252 = AWRIB129 DSM 20252	GCA_000372485	contig	GenBank	1122618 tax ID	*
[Ref.: #66792]	Oenococcus oeni DSM 20252 = AWRIB129 DSM 20252	GCA_000309445	contig	GenBank	1122618 tax ID	*
[Ref.: #66792]	Oenococcus oeni DSM 20252 = AWRIB129	1122618.5	wgs	PATRIC	1122618 tax ID	*
[Ref.: #66792]	Oenococcus oeni DSM 20252 = AWRIB129	1122618.3	wgs	PATRIC	1122618 tax ID	*
[Ref.: #66792]	Oenococcus oeni DSM 20252	2515154139	draft	JGI IMG/M	1122618 tax ID	*

[Ref.: #8662]	GC-content	38.9 mol%
[Ref.: #67770]	GC-content	38.9 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	42 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

Culture collection no.

DSM 20252, ATCC 23279, NCDO 1674, JCM 6125, BCRC 14062, CCUG 30067, CCUG 30199, CCUG 32250, CECT 217, CIP 106144, KCTC 3072, LMG 9851, NBRC 100497, NCIMB 11648, NRIC 1543, NRRL B-3472, VTT E-97832

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Oenococcus oeni cells immobilized on delignified cellulosic material for malolactic fermentation of wine.	Agouridis N, Kopsahelis N, Plessas S, Koutinas AA, Kanellaki M	Bioresour Technol	10.1016/j.biortech.2008.04.026	2008	*
Metabolism	Studies on growth and metabolism of Oenococcus oeni on sugars and sugar mixtures.	Zhang DS, Lovitt RW	J Appl Microbiol	10.1111/j.1365-2672.2005.02628.x	2005	*
Metabolism	Performance assessment of malolactic fermenting bacteria Oenococcus oeni and Lactobacillus brevis in continuous culture.	Zhang D, Lovitt RW	Appl Microbiol Biotechnol	10.1007/s00253-005-0021-y	2005	*
Phylogeny	Proposal to reclassify Leuconostoc oenos as Oenococcus oeni [corrig.] gen. nov., comb. nov..	Dicks LM, Dellaglio F, Collins MD	Int J Syst Bacteriol	10.1099/00207713-45-2-395	1995	*

References

#8662

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20252

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40293 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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