Oenococcus oeni Baudry 1 | Type strain | DSM 20252, ATCC 23279, NCDO 1674

Strain identifier

BacDive ID: 6810

Type strain:

Species: Oenococcus oeni

Strain Designation: Baudry 1

Culture col. no.: DSM 20252, ATCC 23279, NCDO 1674

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #8662]	Domain	Bacteria
[Ref.: #8662]	Phylum	Firmicutes
[Ref.: #8662]	Class	Bacilli
[Ref.: #8662]	Order	Lactobacillales
[Ref.: #8662]	Family	Leuconostocaceae
[Ref.: #8662]	Genus	Oenococcus
[Ref.: #8662]	Species	Oenococcus oeni
[Ref.: #8662]	Full Scientific Name	Oenococcus oeni (Garvie 1967) Dicks et al. 1995
[Ref.: #8662]	Strain Designation	Baudry 1
[Ref.: #8662]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Bacilli		Int. J. Syst. Evol. Microbiol. 60:469
[Ref.: #20215]	Family	Leuconostocaceae		Int. J. Syst. Evol. Microbiol. 60:470
[Ref.: #20215]	Genus	Oenococcus	gen. nov. (VP)	Int. J. Syst. Bacteriol. 45:395*
[Ref.: #20215]	Species	Oenococcus oeni	comb. nov. (VP)	Int. J. Syst. Bacteriol. 45:395*
[Ref.: #20215]	Full Scientific Name	Oenococcus oeni (Garvie 1967) Dicks et al. 1995

[Ref.: #20215]	Synonym	Leuconostoc oenos
[Ref.: #20215]	Synonym	Leuconostoc oeni

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #8662]	Murein short key	A11.18
[Ref.: #8662]	Murein types	A3alpha L-Lys-L-Ser-L-Ala

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #8662]

Culture medium

LEUCONOSTOC OENOS MEDIUM (DSMZ Medium 59), 30°C

[Ref.: #8662]

Culture medium growth

[Ref.: #8662]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40293]

Culture medium

MEDIUM 292 - for Oenococcus oeni

[Ref.: #40293]

Culture medium growth

[Ref.: #40293]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8662]			growth	30 ̊C
[Ref.: #40293]			growth	22 ̊C

[Ref.: #8662]	Temperature range	mesophilic
[Ref.: #40293]	Temperature range	psychrophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #8662]

Sample type/isolated from

wine

Isolation sources categories

#Engineered

#Food production

#Fermented beverage

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #8662]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #8662]

GC-content

38.9 mol%

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Oenococcus oeni mleR, mleA, mleP genes for malolactic regulator, malolactic enzyme, malate permease, complete cds, strain: ATCC 23279	AB235205	4218	1247	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Oenococcus oeni malolactic enzyme (mle) gene, partial cds	AF098780	537	1247	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Oenococcus oeni arginine deiminase (arcA), catabolic ornithine transcarbamylase (arcB), and carbamate kinase (arcC) genes, complete cds	AF124851	5624	1247	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Oenococcus oeni arginine/ornithine antiporter ArcD1 (arcD1) and arginine/ornithine antiporter ArcD2 (arcD2) genes, complete cds	AF541253	3724	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Oenococcus oeni partial recN gene for DNA repair and genetic recombination protein, type strain CECT 217T	AM698012	1205	1247	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Oenococcus oeni strain DSM 20252 RpoB gene, partial cds	AF515656	324	1247	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_0.1_C, whole genome shotgun sequence	AQVA01000001	357128	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_1.2_C, whole genome shotgun sequence	AQVA01000002	184420	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_2.3_C, whole genome shotgun sequence	AQVA01000003	154335	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_3.4_C, whole genome shotgun sequence	AQVA01000004	138267	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_4.5_C, whole genome shotgun sequence	AQVA01000005	137536	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_5.6_C, whole genome shotgun sequence	AQVA01000006	109312	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_6.7_C, whole genome shotgun sequence	AQVA01000007	97086	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_7.8_C, whole genome shotgun sequence	AQVA01000008	91646	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_8.9_C, whole genome shotgun sequence	AQVA01000009	79790	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_9.10_C, whole genome shotgun sequence	AQVA01000010	75147	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_10.11_C, whole genome shotgun sequence	AQVA01000011	73795	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_11.12_C, whole genome shotgun sequence	AQVA01000012	60136	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_12.13_C, whole genome shotgun sequence	AQVA01000013	43547	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_13.14_C, whole genome shotgun sequence	AQVA01000014	26057	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_14.15_C, whole genome shotgun sequence	AQVA01000015	19681	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_15.16_C, whole genome shotgun sequence	AQVA01000016	16670	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_16.17_C, whole genome shotgun sequence	AQVA01000017	16360	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_17.18_C, whole genome shotgun sequence	AQVA01000018	13484	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_18.19_C, whole genome shotgun sequence	AQVA01000019	10642	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_19.20_C, whole genome shotgun sequence	AQVA01000020	8264	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_20.21_C, whole genome shotgun sequence	AQVA01000021	6129	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_21.22_C, whole genome shotgun sequence	AQVA01000022	3636	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_22.23_C, whole genome shotgun sequence	AQVA01000023	3413	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_23.24_C, whole genome shotgun sequence	AQVA01000024	2628	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_24.25_C, whole genome shotgun sequence	AQVA01000025	2320	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_25.26_C, whole genome shotgun sequence	AQVA01000026	2161	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_26.27_C, whole genome shotgun sequence	AQVA01000027	2026	1122618	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Oenococcus oeni DSM 20252 = AWRIB129 strain DSM 20252 A3G9DRAFT_scaffold_27.28_C, whole genome shotgun sequence	AQVA01000028	1965	1122618	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Oenococcus oeni culture-collection DSM:20252 malolactic enzyme gene, complete cds	GQ911572	1626	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Oenococcus oeni adh3 gene for group III alcohol dehydrogenase, strain DSM 20252	HE974350	1173	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	TPA: Oenococcus oeni DSM 20252 = AWRIB129 transfer-messenger mRNA Oenoc_oeni_PSU1, single chain mature transcript	HG788997	350	1122618	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	TPA: Oenococcus oeni DSM 20252 = AWRIB129 transfer-messenger mRNA Oenoc_oeni_PSU1, single chain mature transcript	HG788998	350	1122618	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Oenococcus oeni gene for 16S rRNA, strain:JCM 6125	AB022924	1471	1247	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Oenococcus oeni gene for 16S rRNA, partial sequence, strain: JCM 6125	AB596939	1486	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Oenococcus oeni partial pheS gene for phenylalanyl-tRNA synthetase alpha chain, type strain LMG 9851T	FM202093	401	1247	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Oenococcus oeni gene for 16S rRNA, partial sequence, strain: NBRC 100497	AB681195	1489	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Oenococcus oeni partial recA gene for recombinase A, strain NCDO 1674T	AJ621689	600	1247	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Leuconostoc oenos gene for 16S ribosomal RNA, partial sequence	D31673	208	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	O.oeni 16S ribosomal RNA	X95980	1335	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	O.oeni rpoC gene	X96384	3012	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	L.oenos randomly amplified polymorphic DNA fragment OPA11-640A	X99955	642	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	L.oenos randomly amplified polymorphic DNA fragment OPA20-560	X99956	577	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	L.oenos randomly amplified polymorphic DNA fragment OPA16-700	X99958	708	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	L.oenos randomly amplified polymorphic DNA fragment OPA9-500	X99959	524	1247	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	L.oenos DNA for 16S-23S intergenic spacer region	X90455	495	1247	*
[Ref.: #8662]	INSDC (WGS)		AQVA00000000

Availability in culture collectionsStrain availability

[Ref.: #8662]

Culture collection no.

DSM 20252, ATCC 23279, NCDO 1674

[Ref.: #8662]

Strain history

<- NCDO <- E. Peynaud, Baudry 1

[Ref.: #20218]

Associated Passport(s) in StrainInfo

14741, 14736, 123450

References

#8662

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20252

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40293 ; Curators of the CIP;
* These References are textmined

Search for species Oenococcus oeni in external resources:
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