Name: Leptospira noguchii CZ 214
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6800

Type strain:

Species: Leptospira noguchii

Strain Designation: CZ 214, LEP1178

Culture col. no.: DSM 21520, ATCC 43288, CRBIP 6.1178

Strain history: CIP <- 2002, D. Postic, Inst. Pasteur, Paris, France: strain CZ 214

NCBI tax ID(s): 28182 (species)

SI-ID 45125

ATCC 43288, CRBIP6.1178

Other strains from Leptospira noguchii

L. noguchii LEP1248, CRBIP6.1248, LSU 1945 (type strain)
L. noguchii LEP 1256, Toad 60, CRBIP6.1256 (type strain)
L. noguchii LEP 1257, 507, CRBIP6.1257 (type strain)
L. noguchii LEP1154, CRBIP6.1154, LSU 1945
L. noguchii LEP1221, CRBIP6.1221, LSU 2580
L. noguchii LEP1254, V42, CRBIP6.1254
L. noguchii LEP1259, M7, CRBIP6.1259
L. noguchii LEP1307, 1161 U, CRBIP6.1307
L. noguchii LEP1309, Fort Bragg, CRBIP6.1309
L. noguchii LEP1310, Peludo, CRBIP6.1310
L. noguchii LEP 1311, 507, CRBIP6.1311
L. noguchii LEP1313, CRBIP6.1313, LSU 1945
L. noguchii LEP1339, 24 K, CRBIP6.1339
L. noguchii LEP1345, 1011, CRBIP6.1345
L. noguchii LEP1350, 1161 U, CRBIP6.1350
L. noguchii LEP1360, 1348 U, CRBIP6.1360
L. noguchii LEP1407, Fort Bragg, CRBIP6.1407
L. noguchii LEP1430, CRBIP6.1430, LSU 1551
L. noguchii LEP 1433, Toad 67, CRBIP6.1433
L. noguchii LEP1437, 1996 K (LT940), CRBIP6.1437

Section

Leptospira noguchii CZ 214 is a mesophilic bacterium that was isolated from opossum kidney, Didelphis marsupialis.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Leptospirales*
	Family	*Leptospiraceae*
	Genus	*Leptospira*
	Species	**Leptospira noguchii**
	Full Scientific Name (LPSN)	Leptospira noguchii Yasuda et al. 1987

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15757]

Culture medium

LEPTOSPIRA-MEDIUM (DSMZ Medium 1113)

[Ref.: #15757]

Culture medium growth

[Ref.: #15757]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15757]

Culture medium composition

expand / minimize

[Ref.: #121326]

Culture medium

CIP Medium 189

[Ref.: #121326]

Culture medium growth

[Ref.: #121326]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #15757]			growth	30 °C
[Ref.: #121326]			growth	29 °C

[Ref.: #15757]	Temperature range	mesophilic
[Ref.: #121326]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #121326]	13907	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15757]	Sample type/isolated from	opossum kidney, Didelphis marsupialis
[Ref.: #15757]	Host species	Didelphis marsupialis
[Ref.: #15757]	Country	Panama
[Ref.: #15757]	Country ISO 3 Code	PAN
[Ref.: #15757]	Continent	Middle and South America

[Ref.: #121326]	Sample type/isolated from	Animal, Opossum
[Ref.: #121326]	Country	Panama
[Ref.: #121326]	Country ISO 3 Code	PAN
[Ref.: #121326]	Continent	North America
[Ref.: #121326]	Isolation date	1962
* marker position based on {}

Isolation sources categories

#Host	#Mammals	-
#Host Body-Site	#Urogenital tract	#Kidney

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY631886 (>99% sequence identity) for Leptospira from Microbeatlas

Aquatic Samples	210
Soil Samples	127
Animal Samples	210
Plant Samples	25
Total Samples	572

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15757]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121326]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15757]	Leptospira noguchii serovar Panama strain CZ 214 16S ribosomal RNA gene, partial sequence	AY631886	1431	ENA	293073 tax ID

[Ref.: #15757]

GC-content

36.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #15757]

Culture collection no.

DSM 21520, ATCC 43288, CRBIP 6.1178

[Ref.: #76268]

SI-ID 45125

References

#15757

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21520

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#68371

Automatically annotated from API 50CH acid .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76268

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45125.1 )

#121326 Collection of Institut Pasteur ; Curators of the CIP; CRBIP6.1178
* These data were automatically processed and therefore are not curated

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