Name: Roseomonas ludipueritiae 170/96
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 68

Type strain:

Species: Roseomonas ludipueritiae

Strain Designation: 170/96

Culture col. no.: DSM 14915, CIP 107418, CCUG 55703

Strain history: CIP <- 2002, P. Kämpfer, Giessen Univ., Giessen, Germany: strain 170/96 <- 1998, M.A. Anderson

NCBI tax ID(s): 198093 (species)

SI-ID 113557

DSM 14915, CIP 107418, CCUG 55703

Other strains from Roseomonas ludipueritiae

R. ludipueritiae CCUG 58345

Section

Roseomonas ludipueritiae 170/96 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from wall of a childrens care center.

Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas ludipueritiae**
	Full Scientific Name (LPSN)	Roseomonas ludipueritiae (Kämpfer et al. 2003) Sánchez-Porro et al. 2009

	Synonym	Pseudoroseomonas ludipueritiae
	Synonym	Teichococcus ludipueritiae

Information on morphological and physiological properties Morphology

[Ref.: #120663]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.989

[Ref.: #120663]	Cell shape	oval-shaped

[Ref.: #120663]	Motility	no

[Ref.: #120663]	Hemolysis ability	1

[Ref.: #60700]	Incubation period	2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5459]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #5459]

Culture medium growth

[Ref.: #5459]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5459]

Culture medium composition

expand / minimize

[Ref.: #33790]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33790]

Culture medium growth

[Ref.: #33790]

Culture medium composition

expand / minimize

[Ref.: #120663]

Culture medium

CIP Medium 72

[Ref.: #120663]

Culture medium growth

[Ref.: #120663]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5459]		growth	28 °C
[Ref.: #33790]		growth	30 °C
[Ref.: #60700]		growth	30 °C
[Ref.: #120663]		growth	15-41 °C
[Ref.: #120663]	no	growth	10 °C
[Ref.: #120663]	no	growth	45 °C

[Ref.: #5459]	Temperature range	mesophilic
[Ref.: #33790]	Temperature range	mesophilic
[Ref.: #60700]	Temperature range	mesophilic
[Ref.: #120663]	Temperature range	psychrophilic
[Ref.: #120663]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #60700]	Oxygen tolerance	aerobe
[Ref.: #120663]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.99

	Salt	Tested relation		Salt conc.
[Ref.: #120663]	NaCl		growth	0	%
[Ref.: #120663]	NaCl	no	growth	2	%
[Ref.: #120663]	NaCl	no	growth	4	%
[Ref.: #120663]	NaCl	no	growth	6	%
[Ref.: #120663]	NaCl	no	growth	8	%
[Ref.: #120663]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #120663]	citrate ChEBI	-	carbon source
[Ref.: #120663]	esculin ChEBI	-	hydrolysis
[Ref.: #120663]	hippurate ChEBI	+	hydrolysis
[Ref.: #120663]	nitrate ChEBI	-	reduction
[Ref.: #120663]	nitrate ChEBI	-	respiration
[Ref.: #120663]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120663]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #120663]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #120663]		acetoin ChEBI	-
[Ref.: #120663]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #120663]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120663]	amylase	+
[Ref.: #120663]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #120663]	caseinase	-	3.4.21.50
[Ref.: #120663]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #120663]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120663]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120663]	gelatinase	-
[Ref.: #120663]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120663]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120663]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120663]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120663]	oxidase	+
[Ref.: #120663]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120663]	tryptophan deaminase	-
[Ref.: #120663]	tween esterase	+
[Ref.: #120663]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120663]	2200	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120663]	10334	-	+	+	+	-	+	-	-	-	-	-	+	-	-	+	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5459]	Sample type/isolated from	wall of a childrens care center
[Ref.: #5459]	Country	Finland
[Ref.: #5459]	Country ISO 3 Code	FIN
[Ref.: #5459]	Continent	Europe

[Ref.: #60700]	Sample type/isolated from	Wall of a children care center
[Ref.: #60700]	Sampling date	1998
[Ref.: #60700]	Country	Finland
[Ref.: #60700]	Country ISO 3 Code	FIN
[Ref.: #60700]	Continent	Europe

[Ref.: #120663]	Sample type/isolated from	Wall of a children care centre
[Ref.: #120663]	Country	Finland
[Ref.: #120663]	Country ISO 3 Code	FIN
[Ref.: #120663]	Continent	Europe
[Ref.: #120663]	Isolation date	1998
* marker position based on {}

Isolation sources categories

#Engineered

#Built environment

#House

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ488504 (>99% sequence identity) for Roseomonas ludipueritiae subclade from Microbeatlas

Aquatic Samples	97
Soil Samples	285
Animal Samples	321
Plant Samples	294
Total Samples	997

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5459]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120663]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5459]	Teichococcus ludipueritiae partial 16S rRNA gene	AJ488504	1486	ENA	198093 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoroseomonas ludipueritiae DSM 14915	GCA_014490445	scaffold	GenBank	198093 tax ID	*
[Ref.: #66792]	Roseomonas ludipueritiae strain DSM 14915	198093.3	wgs	PATRIC	198093 tax ID	*

[Ref.: #5459]

GC-content

65.8 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Roseomonas ludipueritiae DSM 14915 NCBI: GCA_014490445.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseomonas ludipueritiae DSM 14915 NCBI: GCA_014490445.1
[Ref.: #69480]	flagellated	no	87.462	no
[Ref.: #69480]	gram-positive	no	97.283	no
[Ref.: #69480]	anaerobic	no	97.676	no
[Ref.: #69480]	aerobic	yes	93.329	no
[Ref.: #69480]	halophile	no	93.5	no
[Ref.: #69480]	spore-forming	no	93.166	no
[Ref.: #69480]	thermophile	no	98.087	no
[Ref.: #69480]	glucose-util	yes	83.061	no
[Ref.: #69480]	motile	yes	76.915	no
[Ref.: #69480]	glucose-ferment	no	90.221	no

Availability in culture collections External links

[Ref.: #5459]

Culture collection no.

DSM 14915, CIP 107418, CCUG 55703

[Ref.: #69752]

SI-ID 113557

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of tick-borne Roseomonas haemaphysalidis sp. nov. and rodent-borne Roseomonas marmotae sp. nov.	Zhu W, Zhou J, Lu S, Yang J, Lai XH, Jin D, Pu J, Huang Y, Liu L, Li Z, Xu J	J Microbiol	10.1007/s12275-022-1428-1	2021	*
Phylogeny	Roseomonas wenyumeiae sp. nov., isolated from faeces of Tibetan antelopes (Pantholops hodgsonii) on the Qinghai-Tibet Plateau.	Tian Z, Lu S, Jin D, Yang J, Pu J, Lai XH, Wang XX, Wu XM, Li J, Wang S, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003479	2019	*
Phylogeny	Roseomonas hibiscisoli sp. nov., isolated from the rhizosphere of Mugunghwa (Hibiscus syriacus).	Yan ZF, Lin P, Li CT, Kook M, Wang QJ, Yi TH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002036	2017	*
Phylogeny	Roseomonas aerophila sp. nov., isolated from air.	Kim SJ, Weon HY, Ahn JH, Hong SB, Seok SJ, Whang KS, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.046482-0	2012	*
Phylogeny	Roseomonas aestuarii sp. nov., a bacteriochlorophyll-a containing alphaproteobacterium isolated from an estuarine habitat of India.	Venkata Ramana V, Sasikala Ch, Takaichi S, Ramana ChV	Syst Appl Microbiol	10.1016/j.syapm.2009.09.004	2009	*
Phylogeny	Transfer of Teichococcus ludipueritiae and Muricoccus roseus to the genus Roseomonas, as Roseomonas ludipueritiae comb. nov. and Roseomonas rosea comb. nov., respectively, and emended description of the genus Roseomonas.	Sanchez-Porro C, Gallego V, Busse HJ, Kampfer P, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.004820-0	2009	*
Phylogeny	Teichococcus ludipueritiae gen. nov. sp. nov., and Muricoccus roseus gen. nov. sp. nov. representing two new genera of the alpha-1 subclass of the Proteobacteria.	Kampfer P, Andersson MA, Jackel U, Salkinoja-Salonen M	Syst Appl Microbiol	10.1078/072320203322337272	2003	*

References

#5459

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14915

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#33790 ; Curators of the CIP;
#60700 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55703

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69752

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID113557.1 )

#120663 Collection of Institut Pasteur ; Curators of the CIP; CIP 107418
* These data were automatically processed and therefore are not curated

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Roseomonas ludipueritiae DSM 14915

Roseomonas ludipueritiae DSM 14915

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