Legionella pneumophila subsp. pneumophila 77-091436 is a microaerophile bacterium of the family Legionellaceae.
microaerophile genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Legionellales |
| Family Legionellaceae |
| Genus Legionella |
| Species Legionella pneumophila subsp. pneumophila |
| Full scientific name Legionella pneumophila subsp. pneumophila (Brenner et al. 1979) Brenner et al. 1989 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17941 | BCYE-AGAR (DSMZ Medium 585) | Medium recipe at MediaDive | Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 17941 | positive | growth | 37 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 45813_H02 assembly for Legionella pneumophila NCTC11404 | complete | 446 | 99.2 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 94.01 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.77 | no |
| 125439 | motility | BacteriaNetⓘ | no | 59.95 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.42 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 97.48 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.03 | yes |
| 125438 | aerobic | aerobicⓘ | no | 76.52 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 91.96 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.97 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 61.06 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Legionella confirmation using real-time PCR and SYTO9 is an alternative to current methodology. | Giglio S, Monis PT, Saint CP. | Appl Environ Microbiol | 10.1128/aem.71.12.8944-8948.2005 | 2005 | |
| Demonstration of preferential binding of SYBR Green I to specific DNA fragments in real-time multiplex PCR. | Giglio S, Monis PT, Saint CP. | Nucleic Acids Res | 10.1093/nar/gng135 | 2003 | ||
| Multiplication of different Legionella species in Mono Mac 6 cells and in Acanthamoeba castellanii. | Neumeister B, Schoniger S, Faigle M, Eichner M, Dietz K. | Appl Environ Microbiol | 10.1128/aem.63.4.1219-1224.1997 | 1997 | ||
| Metabolism | Targeting species-specific low-affinity 16S rRNA binding sites by using peptide nucleic acids for detection of Legionellae in biofilms. | Wilks SA, Keevil CW. | Appl Environ Microbiol | 10.1128/aem.02918-05 | 2006 | |
| Phylogeny | Comparative evaluation of three different genotyping methods for investigation of nosocomial outbreaks of Legionnaires' disease in hospitals. | Jonas D, Meyer HG, Matthes P, Hartung D, Jahn B, Daschner FD, Jansen B. | J Clin Microbiol | 10.1128/jcm.38.6.2284-2291.2000 | 2000 | |
| Molecular characterization of a virulence-associated epitope on the lipopolysaccharide of Legionella pneumophila serogroup 1. | Helbig JH, Luck PC, Knirel YA, Witzleb W, Zahringer U. | Epidemiol Infect | 10.1017/s0950268800058131 | 1995 | ||
| Genetic characterization of Legionella pneumophila serogroup 1 associated with respiratory disease in Australia. | Lanser J, Adams M, Doyle R, Hewitt P, Sangster N. | Appl Environ Microbiol | 10.1128/aem.58.2.706-708.1992 | 1992 | ||
| Phylogeny | Development of a standardized subgrouping scheme for Legionella pneumophila serogroup 1 using monoclonal antibodies. | Joly JR, McKinney RM, Tobin JO, Bibb WF, Watkins ID, Ramsay D. | J Clin Microbiol | 10.1128/jcm.23.4.768-771.1986 | 1986 | |
| Monoclonal antibodies to Legionella Mip proteins recognize genus- and species-specific epitopes. | Helbig JH, Ludwig B, Luck PC, Groh A, Witzleb W, Hacker J. | Clin Diagn Lab Immunol | 10.1128/cdli.2.2.160-165.1995 | 1995 | ||
| Phylogeny | Identification and DNA fingerprinting of Legionella strains by randomly amplified polymorphic DNA analysis. | Bansal NS, McDonell F. | J Clin Microbiol | 10.1128/jcm.35.9.2310-2314.1997 | 1997 | |
| Detection of flagella in 278 Legionella strains by latex reagent sensitized with antiflagellum immunoglobulins. | Bornstein N, Marmet D, Dumaine MH, Surgot M, Fleurette J. | J Clin Microbiol | 10.1128/jcm.29.5.953-956.1991 | 1991 | ||
| Phylogeny | Sequence-based classification scheme for the genus Legionella targeting the mip gene. | Ratcliff RM, Lanser JA, Manning PA, Heuzenroeder MW. | J Clin Microbiol | 10.1128/jcm.36.6.1560-1567.1998 | 1998 | |
| Phylogeny | Typing of Legionella pneumophila strains by polymerase chain reaction-mediated DNA fingerprinting. | van Belkum A, Struelens M, Quint W. | J Clin Microbiol | 10.1128/jcm.31.8.2198-2200.1993 | 1993 | |
| Intergenic 16S rRNA gene (rDNA)-23S rDNA sequence length polymorphisms in members of the family Legionellaceae. | Hookey JV, Birtles RJ, Saunders NA. | J Clin Microbiol | 10.1128/jcm.33.9.2377-2381.1995 | 1995 | ||
| Phase-variable expression of lipopolysaccharide contributes to the virulence of legionella pneumophila. | Luneberg E, Zahringer U, Knirel YA, Steinmann D, Hartmann M, Steinmetz I, Rohde M, Kohl J, Frosch M. | J Exp Med | 10.1084/jem.188.1.49 | 1998 | ||
| Genus-specific epitope on the 60-kilodalton Legionella heat shock protein recognized by a monoclonal antibody. | Steinmetz I, Rheinheimer C, Hubner I, Bitter-Suermann D. | J Clin Microbiol | 10.1128/jcm.29.2.346-354.1991 | 1991 | ||
| Phylogeny | Usefulness of fatty acid composition for differentiation of Legionella species. | Diogo A, Verissimo A, Nobre MF, da Costa MS. | J Clin Microbiol | 10.1128/jcm.37.7.2248-2254.1999 | 1999 | |
| Phylogeny | DNA fingerprinting of medically important microorganisms by use of PCR. | van Belkum A. | Clin Microbiol Rev | 10.1128/cmr.7.2.174 | 1994 |
| #17941 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25214 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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