Legionella parisiensis PF-209C-C2 is a microaerophile, Gram-negative, motile bacterium that was isolated from water in cooling tower.
Gram-negative motile rod-shaped microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Legionellales |
| Family Legionellaceae |
| Genus Legionella |
| Species Legionella parisiensis |
| Full scientific name Legionella parisiensis Brenner et al. 1985 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7974 | BCYE-AGAR (DSMZ Medium 585) | Medium recipe at MediaDive | Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base | ||
| 34425 | MEDIUM 23 - for Afipia and Legionella | Distilled water make up to (1000.000 ml);Legionella agar (37.000 g);Legionella - enrichment mixture (10.000 ml) | |||
| 121598 | CIP Medium 23 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 98.763 |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 7974 | catalase | + | 1.11.1.6 | |
| 121598 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 7974 | cytochrome-c oxidase | + | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121598 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | + | from API zym |
Global distribution of 16S sequence Z49731 (>99% sequence identity) for Legionella parisiensis from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | 51485_C01 assembly for Legionella parisiensis NCTC11983 | contig | 45071 | 78.85 | ||||
| 124043 | ASM146794v1 assembly for Legionella parisiensis PF-209-C-C2 | scaffold | 45071 | 71.32 | ||||
| 66792 | Leg_parisiensis_PF-209C-C2.v1 assembly for Legionella parisiensis PF-209C-C2 | scaffold | 45071 | 71.03 | ||||
| 67770 | ASM173614v1 assembly for Legionella parisiensis DSM 19216 | contig | 45071 | 31.82 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Legionella parisiensis strain MDC1587 16S ribosomal RNA gene, partial sequence | JF720396 | 524 | 45071 | ||
| 20218 | L.parisiensis gene for ribosomal RNA, small subunit | Z49731 | 1405 | 45071 | ||
| 7974 | Legionella parisiensis 16S ribosomal RNA gene, complete sequence | U59697 | 1347 | 45071 | ||
| 67770 | Legionella parisiensis JCM 7561 gene for 16S ribosomal RNA, partial sequence | LC504039 | 1466 | 45071 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 42 | thermal denaturation, midpoint method (Tm) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.32 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 96.69 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 44.50 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.76 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.99 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.09 | no |
| 125438 | aerobic | aerobicⓘ | no | 75.80 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 88.76 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.27 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 64.22 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Enzymology | Electronic selection of viable Legionella cells by a video-based, quantifiable dielectrophoresis approach. | Altmann M, Henriksson A, Neubauer P, Birkholz M. | Biomed Microdevices | 10.1007/s10544-025-00762-1 | 2025 | |
| Validation of a Loop-Mediated Isothermal Amplification-Based Kit for the Detection of Legionella pneumophila in Environmental Samples According to ISO/TS 12869:2012. | Caruso G, Coniglio MA, Lagana P, Fasciana T, Arcoleo G, Arrigo I, Di Carlo P, Palermo M, Giammanco A. | Microorganisms | 10.3390/microorganisms12050961 | 2024 | ||
| Phylogeny | Legionella confirmation using real-time PCR and SYTO9 is an alternative to current methodology. | Giglio S, Monis PT, Saint CP. | Appl Environ Microbiol | 10.1128/aem.71.12.8944-8948.2005 | 2005 | |
| Enzymology | The first clinical isolate of Legionella parisiensis, from a liver transplant patient with pneumonia. | Lo Presti F, Riffard S, Vandenesch F, Reyrolle M, Ronco E, Ichai P, Etienne J. | J Clin Microbiol | 10.1128/jcm.35.7.1706-1709.1997 | 1997 | |
| Biotechnology | Detection of Salmonella spp. in oysters by PCR. | Bej AK, Mahbubani MH, Boyce MJ, Atlas RM. | Appl Environ Microbiol | 10.1128/aem.60.1.368-373.1994 | 1994 | |
| Enzymology | Rapid method for enumeration of viable Legionella pneumophila and other Legionella spp. in water. | Delgado-Viscogliosi P, Simonart T, Parent V, Marchand G, Dobbelaere M, Pierlot E, Pierzo V, Menard-Szczebara F, Gaudard-Ferveur E, Delabre K, Delattre JM. | Appl Environ Microbiol | 10.1128/aem.71.7.4086-4096.2005 | 2005 | |
| Metabolism | Legionella shows a diverse secondary metabolism dependent on a broad spectrum Sfp-type phosphopantetheinyl transferase. | Tobias NJ, Ahrendt T, Schell U, Miltenberger M, Hilbi H, Bode HB | PeerJ | 10.7717/peerj.2720 | 2016 | |
| Phylogeny | Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov. | Cristino S, Pascale MR, Marino F, Derelitto C, Salaris S, Orsini M, Squarzoni S, Grottola A, Girolamini L. | Pathogens | 10.3390/pathogens13030250 | 2024 |
| #7974 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19216 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34425 | ; Curators of the CIP; |
| #49706 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29670 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121598 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103847 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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