Lacticaseibacillus nasuensis (DSM 26653, CGMCC 1.10801, JCM 17158)

Name: Lacticaseibacillus nasuensis (DSM 26653, CGMCC 1.10801, JCM 17158)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6703

Type strain

Strain Designation SU 18

Culture col. no. DSM 26653 CGMCC 1.10801 JCM 17158 SU 18 LMG 29535 1 more

NCBI tax ID(s) 1291734 944671

Special Collections DSMZ JCM KCTC Literature strains

History <- JCM; JCM 17158 Y. Cai SU18.

Links

Lacticaseibacillus nasuensis SU 18 is a microaerophile, Gram-positive, rod-shaped bacterium that was isolated from sudan grass Sorghum sudanense silage.

Gram-positive rod-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 379070

LMG 29535,DSM 26653,JCM 17158,CGMCC 1.10801

@ref 20215

Last LPSN update 2026-02-09 11:19:17

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lacticaseibacillus

Species Lacticaseibacillus nasuensis

Full scientific name Lacticaseibacillus nasuensis (Cai et al. 2012) Zheng et al. 2020

Synonyms (1)

Lactobacillus nasuensis

BacDive ID	Other strains from **Lacticaseibacillus nasuensis** (1)	Type strain
161953	L. nasuensis JCM 17159

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30252	positive	8.7-9 µm	2.9-3 µm	rod-shaped
125438					90
125438	positive				92.864

Pigmentation

30252

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18266	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18266	positive	growth	30
30252	positive	growth	40
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
30252	positive	growth	04-08	acidophile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
18266	microaerophile
30252	facultative anaerobe
125439	obligate anaerobe	93.4

Spore formation

@ref	Spore formation	Confidence
30252
125439		98.4

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30252	NaCl	positive	growth	3 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30252	16808 ChEBI	2-dehydro-D-gluconate	+	carbon source
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
30252	22599 ChEBI	arabinose	+	carbon source
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
30252	17306 ChEBI	maltose	+	carbon source
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
30252	33942 ChEBI	ribose	+	carbon source
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
30252	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30252	alpha-galactosidase	+	3.2.1.22

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	formaldehyde oxidation	100	3 of 3
66794	ribulose monophosphate pathway	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	teichoic acid biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	palmitate biosynthesis	90.91	20 of 22
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	starch degradation	80	8 of 10
66794	glycogen metabolism	80	4 of 5
66794	purine metabolism	77.66	73 of 94
66794	glycogen biosynthesis	75	3 of 4
66794	pyrimidine metabolism	73.33	33 of 45
66794	pentose phosphate pathway	72.73	8 of 11
66794	propanol degradation	71.43	5 of 7
66794	serine metabolism	66.67	6 of 9
66794	valine metabolism	66.67	6 of 9
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	glutathione metabolism	64.29	9 of 14
66794	photosynthesis	64.29	9 of 14
66794	d-xylose degradation	63.64	7 of 11
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	gluconeogenesis	62.5	5 of 8
66794	phenylalanine metabolism	61.54	8 of 13
66794	vitamin B1 metabolism	61.54	8 of 13
66794	Entner Doudoroff pathway	60	6 of 10
66794	glycolysis	58.82	10 of 17
66794	oxidative phosphorylation	58.24	53 of 91
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	degradation of pentoses	57.14	16 of 28
66794	d-mannose degradation	55.56	5 of 9
66794	flavin biosynthesis	53.33	8 of 15
66794	cysteine metabolism	50	9 of 18
66794	ethanol fermentation	50	1 of 2
66794	NAD metabolism	50	9 of 18
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	suberin monomers biosynthesis	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	sulfopterin metabolism	50	2 of 4
66794	ketogluconate metabolism	50	4 of 8
66794	adipate degradation	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	non-pathway related	47.37	18 of 38
66794	methionine metabolism	46.15	12 of 26
66794	proline metabolism	45.45	5 of 11
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	glutamate and glutamine metabolism	42.86	12 of 28
66794	mevalonate metabolism	42.86	3 of 7
66794	isoprenoid biosynthesis	42.31	11 of 26
66794	glycine metabolism	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	degradation of hexoses	38.89	7 of 18
66794	alanine metabolism	37.93	11 of 29
66794	histidine metabolism	37.93	11 of 29
66794	isoleucine metabolism	37.5	3 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
66794	tryptophan metabolism	36.84	14 of 38
66794	tetrahydrofolate metabolism	35.71	5 of 14
66794	lysine metabolism	35.71	15 of 42
66794	cyanate degradation	33.33	1 of 3
66794	chorismate metabolism	33.33	3 of 9
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	L-lactaldehyde degradation	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	coenzyme M biosynthesis	30	3 of 10
66794	myo-inositol biosynthesis	30	3 of 10
66794	threonine metabolism	30	3 of 10
66794	lipid metabolism	29.03	9 of 31
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	citric acid cycle	28.57	4 of 14
66794	degradation of sugar acids	28	7 of 25
66794	metabolism of disaccharids	27.27	3 of 11
66794	vitamin B6 metabolism	27.27	3 of 11
66794	degradation of sugar alcohols	25	4 of 16
66794	lactate fermentation	25	1 of 4
66794	degradation of aromatic, nitrogen containing compounds	25	3 of 12
66794	carnitine metabolism	25	2 of 8
66794	cyclohexanol degradation	25	1 of 4
66794	CMP-KDO biosynthesis	25	1 of 4
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	leucine metabolism	23.08	3 of 13
66794	urea cycle	23.08	3 of 13
66794	sulfate reduction	23.08	3 of 13
66794	ascorbate metabolism	22.73	5 of 22
66794	nitrate assimilation	22.22	2 of 9
66794	CO2 fixation in Crenarchaeota	22.22	2 of 9
66794	lipid A biosynthesis	22.22	2 of 9
66794	tyrosine metabolism	21.43	3 of 14
66794	arginine metabolism	20.83	5 of 24

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
18266	-	-	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
18266	-	-	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
18266	sudan grass Sorghum sudanense (piper) silage	Sorghum sudanense	Nasushiobara, Tochigi; National Institute of Livestock and Grassland Science	Japan	JPN	Asia
67770	Sudan grass [Sorghum sudanense (Piper) Stapf.] silage	Sorghum sudanense	Nasushiobara, Tochigi	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC519984 (>99% sequence identity) for Lacticaseibacillus nasuensis subclade from Microbeatlas

Aquatic Samples	104
Soil Samples	83
Animal Samples	2958
Plant Samples	83
Total Samples	3228

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18266	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143470v1 assembly for Lacticaseibacillus nasuensis JCM 17158	scaffold	GCA_001434705	1291734.4	2663763169	1291734	67.95
67770	ASM131125v1 assembly for Lacticaseibacillus nasuensis JCM 17158	contig	GCA_001311255	1291734.3	2728369677	1291734	6.11

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18266	Lactobacillus nasuensis gene for, partial sequence, strain: SU 18	AB608051	1488		1291734
67770	Lactobacillus nasuensis JCM 17158 gene for 16S rRNA, partial sequence	LC519984	1507		944671

GC content

@ref	GC-content (mol%)	Method
18266	59.2
30252	58.5
67770	57	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Lacticaseibacillus nasuensis JCM 17158
NCBI: GCA_001434705

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	93.40	no
125439	gram_stain	BacteriaNetⓘ	positive	71.60	no
125439	motility	BacteriaNetⓘ	no	66.50	no
125439	spore_formation	BacteriaNetⓘ	no	98.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus nasuensis JCM 17158
PATRIC: 1291734.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.86	yes
125438	anaerobic	anaerobicⓘ	no	85.11	yes
125438	spore-forming	spore-formingⓘ	no	83.72	yes
125438	aerobic	aerobicⓘ	no	93.19	yes
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	90.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus nasuensis sp. nov., a lactic acid bacterium isolated from silage, and emended description of the genus Lactobacillus.	Cai Y, Pang H, Kitahara M, Ohkuma M	Int J Syst Evol Microbiol	10.1099/ijs.0.031781-0	2011

References

#18266	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26653
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26594	IJSEM 1140 2012 ( DOI 10.1099/ijs.0.031781-0 , PubMed 21724957 )
#30252	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26594
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lacticaseibacillus nasuensis (DSM 26653, CGMCC 1.10801, JCM 17158)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

Pathway annotation

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001434705

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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