Latilactobacillus sakei subsp. carnosus (DSM 15831, CCUG 31331, CIP 105422)

Name: Latilactobacillus sakei subsp. carnosus (DSM 15831, CCUG 31331, CIP 105422)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6602

Type strain

Strain Designation R 14b/a

Culture col. no. DSM 15831 CCUG 31331 CIP 105422 JCM 11031 KCTC 3802 6 more

NCBI tax ID(s) 525363 214325

Special Collections DSMZ CCUG JCM KCTC CIP

History <- JCM <- G. Klein <- G. Reuter CIP 105422 <-- CCUG 31331 <-- G. Klein and G. Reuter. <- CCUG <- G Klein and G Reuter CIP <- 1998, CCUG <- G. Klein and G. Reuter, Berlin, Germany

Links

Latilactobacillus sakei subsp. carnosus R 14b/a is a microaerophile, Gram-positive bacterium that was isolated from fermented meat produkt.

Gram-positive microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 9261

LMG 17302,CCUG 31331,CIP 105422,JCM 11031,KCTC 3802,DSM 15831,CECT 5766,KCTC 5053,BCRC 17500,CCRC 17500

@ref 20215

Last LPSN update 2026-02-09 11:19:16

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Latilactobacillus

Species Latilactobacillus sakei subsp. carnosus

Full scientific name Latilactobacillus sakei subsp. carnosus (Torriani et al. 1996) Zheng et al. 2020

Synonyms (3)

Lactobacillus curvatus subsp. melibiosus
Lactobacillus sakei subsp. carnosus
Lactobacillus sake subsp. carnosus

BacDive ID	Other strains from **Latilactobacillus sakei subsp. carnosus** (1)	Type strain
6603	L. sakei subsp. carnosus R60, CIP 109872, DSM 15740, CCUG 41580

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
67771	positive
122356	positive	rod-shaped
125438	positive		91.153

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6043	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
40506	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
122356	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6043	positive	growth	37
40506	positive	growth	37
50526	positive	growth	37
67770	positive	growth	37
67771	positive	growth	37
122356	positive	growth	10-41
122356	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
6043	microaerophile
50526	anaerobe
50526	microaerophile
67771	facultative anaerobe
122356	facultative anaerobe
125439	microaerophile	98.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
122356	17632 ChEBI	nitrate	-	reduction
122356	17632 ChEBI	nitrate	+	respiration
122356	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
122356	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122356	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122356	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
122356	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
122356	ornithine decarboxylase	-	4.1.1.17
122356	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122356	-	+	-	-	-	+	+	-	-	-	+	+	+	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
6043	-	-	-	-	+	+	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	+	-	-	+	-	+	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-
122356	not determinedn.d.	-	-	-	+	+	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	+/-	-	-	+	-	+	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Meat

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6043	fermented meat produkt	Berlin	Germany	DEU	Europe
50526	Raw sausage
67770	Fermented meat product
67771	From fermented meat product(raw sausage)	Berlin	Germany	DEU	Europe
122356	Raw sausage		Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence LC145559 (>99% sequence identity) for Latilactobacillus from Microbeatlas

Aquatic Samples	2674
Soil Samples	1455
Animal Samples	21518
Plant Samples	1049
Total Samples	26696

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6043	1	Risk group (German classification) According to TRBA 466
122356	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM799231v1 assembly for Latilactobacillus sakei subsp. carnosus NBRC 107868	contig	GCA_007992315	214325.5	214325	66.79
67770	ASM143571v1 assembly for Latilactobacillus sakei subsp. carnosus DSM 15831	scaffold	GCA_001435715	525363.3	525363	65.55
124043	ASM4267926v1 assembly for Latilactobacillus sakei subsp. carnosus CCUG 31331	contig	GCA_042679265		214325	55.49

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lactobacillus sakei subsp. carnosus strain CCUG 31331 16S small subunit ribosomal RNA gene, partial sequence	AY204892	1414	214325
20218	Lactobacillus sakei subsp. carnosus gene for 16S rRNA, partial sequence, strain: JCM 11031	AB289288	658	214325
67770	Lactobacillus sakei subsp. carnosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 11031	LC145559	1513	214325

GC content

@ref	GC-content (mol%)	Method
6043	42-44
67770	42	high performance liquid chromatography (HPLC)
67770	41	genome sequence analysis
67771	42.0	high performance liquid chromatography (HPLC)
67771	41.0	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Latilactobacillus sakei subsp. carnosus DSM 15831
NCBI: GCA_001435715

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	65.70	no
125439	motility	BacteriaNetⓘ	no	55.40	no
125439	gram_stain	BacteriaNetⓘ	positive	70.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	98.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus sakei subsp. carnosus DSM 15831
PATRIC: 525363.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.15	no
125438	anaerobic	anaerobicⓘ	no	88.69	no
125438	spore-forming	spore-formingⓘ	no	84.78	no
125438	aerobic	aerobicⓘ	no	94.02	yes
125438	thermophilic	thermophileⓘ	no	93.97	yes
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706.	Chung KS, Choi JW, Shin JS, Kim SY, Han HS, Kim SY, Lee KY, Kang JY, Cho CW, Hong HD, Rhee YK, Lee KT.	Foods	10.3390/foods10123034	2021
	Exploring ultrasound-induced metabolic attenuation in Lacticaseibacillus casei ATCC 393-A combined approach using traditional methods and flow cytometry.	Giordano I, Salman M, Arioli S, Mora D, Mauriello G.	Front Microbiol	10.3389/fmicb.2025.1589054	2025
Genetics	Integrated phenotypic-genotypic approach to understand the influence of ultrasound on metabolic response of Lactobacillus sakei.	Ojha KS, Burgess CM, Duffy G, Kerry JP, Tiwari BK.	PLoS One	10.1371/journal.pone.0191053	2018
	Legumes and Legume-Based Beverages Fermented with Lactic Acid Bacteria as a Potential Carrier of Probiotics and Prebiotics.	Cichonska P, Ziarno M.	Microorganisms	10.3390/microorganisms10010091	2021
	Phylogenomic analysis in Latilactobacillus sakei by using polymorphisms detected by next-generation sequencing.	Nishiyama C, Sekiguchi S, Sugihara Y, Nishikawa M, Makita N, Segawa T, Terasaki M, Takagi H, Koyanagi T.	Biosci Microbiota Food Health	10.12938/bmfh.2022-017	2023
Phylogeny	Classification of Latilactobacillus sakei subspecies based on MALDI-TOF MS protein profiles using machine learning models.	Kim E, Yang S-M, Lee S-Y, Jung D-H, Kim H-Y.	Microbiol Spectr	10.1128/spectrum.03668-23	2024
	Fermented Kamut Sprout Extract Decreases Cell Cytotoxicity and Increases the Anti-Oxidant and Anti-Inflammation Effect.	Ki H, Baek JS, Hawkes HK, Kim YS, Hwang KY.	Foods	10.3390/foods12112107	2023

References

#6043	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15831
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40506	; Curators of the CIP;
#50526	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 31331
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122356	Collection of Institut Pasteur ; Curators of the CIP; CIP 105422
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Latilactobacillus sakei subsp. carnosus (DSM 15831, CCUG 31331, CIP 105422)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_007992315

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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