Paucilactobacillus vaccinostercus X-94 is an anaerobe, mesophilic prokaryote that was isolated from cow dung.
anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Paucilactobacillus |
| Species Paucilactobacillus vaccinostercus |
| Full scientific name Paucilactobacillus vaccinostercus (Kozaki and Okada 1983) Zheng et al. 2020 |
| Synonyms (2) |
| BacDive ID | Other strains from Paucilactobacillus vaccinostercus (1) | Type strain |
|---|---|---|
| 6599 | P. vaccinostercus MC11, DSM 15802, CCUG 45405, CIP 107501, ... |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8980 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 40458 | MEDIUM 51 - for Lactobacillus vaccinostercus | Distilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g);Xylose (10.000 g) | |||
| 123771 | CIP Medium 41 | Medium recipe at CIP |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8980 | A31 | A1gamma m-Dpm-direct |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | pentose phosphate pathway | 100 | 11 of 11 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | ribulose monophosphate pathway | 100 | 2 of 2 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | teichoic acid biosynthesis | 100 | 1 of 1 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | glutamate and glutamine metabolism | 82.14 | 23 of 28 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | pyrimidine metabolism | 80 | 36 of 45 | ||
| 66794 | cellulose degradation | 80 | 4 of 5 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | purine metabolism | 76.6 | 72 of 94 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | serine metabolism | 66.67 | 6 of 9 | ||
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | ||
| 66794 | NAD metabolism | 66.67 | 12 of 18 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | glycolysis | 64.71 | 11 of 17 | ||
| 66794 | citric acid cycle | 64.29 | 9 of 14 | ||
| 66794 | photosynthesis | 64.29 | 9 of 14 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | starch degradation | 60 | 6 of 10 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | tetrahydrofolate metabolism | 57.14 | 8 of 14 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | degradation of sugar acids | 56 | 14 of 25 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | non-pathway related | 55.26 | 21 of 38 | ||
| 66794 | alanine metabolism | 55.17 | 16 of 29 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | leucine metabolism | 53.85 | 7 of 13 | ||
| 66794 | urea cycle | 53.85 | 7 of 13 | ||
| 66794 | oxidative phosphorylation | 51.65 | 47 of 91 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | degradation of pentoses | 50 | 14 of 28 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | histidine metabolism | 48.28 | 14 of 29 | ||
| 66794 | lysine metabolism | 47.62 | 20 of 42 | ||
| 66794 | flavin biosynthesis | 46.67 | 7 of 15 | ||
| 66794 | arginine metabolism | 45.83 | 11 of 24 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | tryptophan metabolism | 44.74 | 17 of 38 | ||
| 66794 | d-mannose degradation | 44.44 | 4 of 9 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | lipid metabolism | 41.94 | 13 of 31 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | gallate degradation | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | O-antigen biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | ascorbate metabolism | 31.82 | 7 of 22 | ||
| 66794 | phenol degradation | 30 | 6 of 20 | ||
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | ||
| 66794 | tyrosine metabolism | 28.57 | 4 of 14 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | isoprenoid biosynthesis | 26.92 | 7 of 26 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | sulfate reduction | 23.08 | 3 of 13 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) | |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
Global distribution of 16S sequence AM113786 (>99% sequence identity) for Paucilactobacillus vaccinostercus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM143629v1 assembly for Paucilactobacillus vaccinostercus DSM 20634 | scaffold | 1423813 | 62.55 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus vaccinostercus gene for 16S rRNA, partial sequence, strain: NRIC 1075 (= ATCC 33310, = JCM 1716) | AB362703 | 1479 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus partial 16S rRNA gene, strain DSM 20634 | AJ417735 | 508 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus partial 16S rRNA gene, strain type strain:DSM 20634 | AM113786 | 1553 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus gene for 16S rRNA, partial sequence, strain: JCM 1716 | AB289310 | 639 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus partial 16S rRNA gene, strain LMG 9215T | AJ621556 | 1529 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus strain LMG 9215 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence | EU161603 | 796 | 176291 | ||
| 20218 | Lactobacillus vaccinostercus gene for 16S rRNA, partial sequence, strain:NRIC 1075 | AB212087 | 1563 | 176291 | ||
| 67770 | Lactobacillus vaccinostercus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1716 | LC071823 | 1504 | 176291 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 51.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 51.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 73.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 95.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 94.30 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 64.72 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 82.11 | no |
| 125438 | aerobic | aerobicⓘ | no | 92.88 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 90.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Valorization of Xylose-Rich Medium from Cynara cardunculus Stalks for Lactic Acid Production via Microbial Fermentation. | Russo G, Gelosia M, Fabbrizi G, Angrisano M, Policastro G, Cavalaglio G. | Polymers (Basel) | 10.3390/polym16243577 | 2024 | ||
| Application of Theiler's murine encephalomyelitis virus in treatment of multiple sclerosis. | Li L, Zhou R, Sun L. | Front Microbiol | 10.3389/fmicb.2024.1415365 | 2024 | ||
| Bifidobacterium infantis and Bifidobacterium breve Improve Symptomatology and Neuronal Damage in Neurodegenerative Disease: A Systematic Review. | Reiriz M, Beltran-Velasco AI, Echeverry-Alzate V, Martinez-Miguel E, Gomez-Senent S, Uceda S, Clemente-Suarez VJ. | Nutrients | 10.3390/nu17030391 | 2025 | ||
| Factors Associated With Short-Term Eradication of Rectal Colonization by KPC-2 Producing Klebsiella pneumoniae in an Outbreak Setting. | Pellice M, Rodriguez-Nunez O, Rico V, Aguero D, Morata L, Cardozo C, Puerta-Alcalde P, Garcia-Vidal C, Rubio E, Fernandez-Pittol MJ, Vergara A, Pitart C, Marco F, Santana G, Rodriguez-Serna L, Vilella A, Lopez E, Soriano A, Martinez JA, Del Rio A. | Front Microbiol | 10.3389/fmicb.2021.630826 | 2021 | ||
| Potential Role of Probiotics for Inflammaging: A Narrative Review. | Jukic Peladic N, Dell'Aquila G, Carrieri B, Maggio M, Cherubini A, Orlandoni P. | Nutrients | 10.3390/nu13092919 | 2021 | ||
| Probiotics Differently Affect Gut-Associated Lymphoid Tissue Indolamine-2,3-Dioxygenase mRNA and Cerebrospinal Fluid Neopterin Levels in Antiretroviral-Treated HIV-1 Infected Patients: A Pilot Study. | Scagnolari C, Corano Scheri G, Selvaggi C, Schietroma I, Najafi Fard S, Mastrangelo A, Giustini N, Serafino S, Pinacchio C, Pavone P, Fanello G, Ceccarelli G, Vullo V, d'Ettorre G. | Int J Mol Sci | 10.3390/ijms17101639 | 2016 | ||
| High potency multistrain probiotic improves liver histology in non-alcoholic fatty liver disease (NAFLD): a randomised, double-blind, proof of concept study. | Duseja A, Acharya SK, Mehta M, Chhabra S, Shalimar, Rana S, Das A, Dattagupta S, Dhiman RK, Chawla YK. | BMJ Open Gastroenterol | 10.1136/bmjgast-2019-000315 | 2019 | ||
| Pathogenicity | A pilot study on the effects of probiotic supplementation on neuropsychological performance and microRNA-29a-c levels in antiretroviral-treated HIV-1-infected patients. | Ceccarelli G, Fratino M, Selvaggi C, Giustini N, Serafino S, Schietroma I, Corano Scheri G, Pavone P, Passavanti G, Alunni Fegatelli D, Mezzaroma I, Antonelli G, Vullo V, Scagnolari C, d'Ettorre G. | Brain Behav | 10.1002/brb3.756 | 2017 | |
| Impact of High-Dose Multi-Strain Probiotic Supplementation on Neurocognitive Performance and Central Nervous System Immune Activation of HIV-1 Infected Individuals. | Ceccarelli G, Brenchley JM, Cavallari EN, Scheri GC, Fratino M, Pinacchio C, Schietroma I, Fard SN, Scagnolari C, Mezzaroma I, Vullo V, d'Ettorre G. | Nutrients | 10.3390/nu9111269 | 2017 | ||
| Effect of probiotic treatment on the clinical course, intestinal microbiome, and toxigenic Clostridium perfringens in dogs with acute hemorrhagic diarrhea. | Ziese AL, Suchodolski JS, Hartmann K, Busch K, Anderson A, Sarwar F, Sindern N, Unterer S. | PLoS One | 10.1371/journal.pone.0204691 | 2018 | ||
| Effects of probiotics (Vivomixx®) in obese pregnant women and their newborn: study protocol for a randomized controlled trial. | Halkjaer SI, Nilas L, Carlsen EM, Cortes D, Halldorsson TI, Olsen SF, Pedersen AE, Krogfelt KA, Petersen AM. | Trials | 10.1186/s13063-016-1617-5 | 2016 | ||
| Metabolism | Host-probiotic interaction: new insight into the role of the endocannabinoid system by in vivo and ex vivo approaches. | Gioacchini G, Rossi G, Carnevali O. | Sci Rep | 10.1038/s41598-017-01322-1 | 2017 | |
| Pathogenicity | Manipulation of Gut Microbiota Influences Immune Responses, Axon Preservation, and Motor Disability in a Model of Progressive Multiple Sclerosis. | Mestre L, Carrillo-Salinas FJ, Mecha M, Feliu A, Espejo C, Alvarez-Cermeno JC, Villar LM, Guaza C. | Front Immunol | 10.3389/fimmu.2019.01374 | 2019 | |
| Randomized, controlled trial evaluating the effect of multi-strain probiotic on the mucosal microbiota in canine idiopathic inflammatory bowel disease. | White R, Atherly T, Guard B, Rossi G, Wang C, Mosher C, Webb C, Hill S, Ackermann M, Sciabarra P, Allenspach K, Suchodolski J, Jergens AE. | Gut Microbes | 10.1080/19490976.2017.1334754 | 2017 | ||
| Gut microbiota and old age: Modulating factors and interventions for healthy longevity. | Coman V, Vodnar DC. | Exp Gerontol | 10.1016/j.exger.2020.111095 | 2020 | ||
| Adding rumen microorganisms to improve fermentation quality, enzymatic efficiency, and microbial communities of hybrid Pennisetum silage. | Zhou Y, Feng Q, Li Y, Qi Y, Yang F, Zhou J. | Bioresour Technol | 10.1016/j.biortech.2024.131272 | 2024 | ||
| Optimization of a cultivation procedure to selectively isolate lactic acid bacteria from insects. | Gallus MK, Vogel RF, Ehrmann MA. | J Appl Microbiol | 10.1111/jam.15427 | 2022 | ||
| Analysis of lactic acid bacteria species in Miang, a post-fermented tea in Thailand, and their potential use as probiotics. | Horie M, Ruengsomwong S, Ohmiya Y. | Front Microbiol | 10.3389/fmicb.2024.1450158 | 2024 | ||
| Inoculation of Lactobacillus parafarraginis enhances silage quality, microbial community structure, and metabolic profiles in hybrid Pennisetum. | Liu Y, Ling W, Li Y, Zhou Y, Li J, Chen S, Zhou J, Yang F. | BMC Plant Biol | 10.1186/s12870-025-06340-0 | 2025 | ||
| Microbial ecology of selected traditional Ethiopian fermented products. | Sanz-Lopez C, Amato M, Torrent D, Borrego M, Anza M, Bibiso M, Grijalva-Vallejos N, Vilanova C, Porcar M, Pascual J. | Front Microbiol | 10.3389/fmicb.2025.1570914 | 2025 | ||
| The Potential of Co-Fermentation of Whole-Plant Cassava with Piper sarmentosum: A Comprehensive Study of Fermentation Quality, Antioxidant Activity, Bacterial Community Structure, and Microbial Ecological Networks in Novel Foods. | Li M, Lv R, Ou W, Chen S, Zhou H, Hou G, Zi X. | Foods | 10.3390/foods13132126 | 2024 | ||
| Relationship between dynamic changes of microorganisms in Qupi and the quality formation of Fengxiangxing Huairang Daqu. | Cao D, Lv J, Chu J, Xu S, Jin C, Zhang Y, Zhang Y, Zhang W, Kang J. | Front Microbiol | 10.3389/fmicb.2024.1435765 | 2024 | ||
| Genetics | A Combined Metagenomics and Metatranscriptomics Approach to Unravel Costa Rican Cocoa Box Fermentation Processes Reveals Yet Unreported Microbial Species and Functionalities. | Verce M, Schoonejans J, Hernandez Aguirre C, Molina-Bravo R, De Vuyst L, Weckx S. | Front Microbiol | 10.3389/fmicb.2021.641185 | 2021 | |
| Phylogenomic and comparative genomic analyses of Leuconostocaceae species: identification of molecular signatures specific for the genera Leuconostoc, Fructobacillus and Oenococcus and proposal for a novel genus Periweissella gen. nov. | Bello S, Rudra B, Gupta RS. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005284 | 2022 | ||
| Yeast strains do have an impact on the production of cured cocoa beans, as assessed with Costa Rican Trinitario cocoa fermentation processes and chocolates thereof. | Van de Voorde D, Diaz-Munoz C, Hernandez CE, Weckx S, De Vuyst L. | Front Microbiol | 10.3389/fmicb.2023.1232323 | 2023 | ||
| Phylogeny | Lactobacillus wasatchensis sp. nov., a non-starter lactic acid bacteria isolated from aged Cheddar cheese. | Oberg CJ, Oberg TS, Culumber MD, Ortakci F, Broadbent JR, McMahon DJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000689 | 2015 | |
| Phylogeny | Lactobacillus hokkaidonensis sp. nov., isolated from subarctic timothy grass (Phleum pratense L.) silage. | Tohno M, Kitahara M, Uegaki R, Irisawa T, Ohkuma M, Tajima K | Int J Syst Evol Microbiol | 10.1099/ijs.0.047027-0 | 2012 |
| #8980 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20634 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40458 | ; Curators of the CIP; |
| #50244 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30723 |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123771 | Collection of Institut Pasteur ; Curators of the CIP; CIP 102807 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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