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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #67770] |
Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence |
LC483558 |
1510 |
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240427 tax ID |
[Ref.: #20218] |
Lactobacillus paracollinoides gene for 16S-23S rRNA intergenic spacer, partial sequence, 300 bp fragment, strain: DSM 15502 |
AB117956 |
296 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus paracollinoides gene for 16S-23S rRNA intergenic spacer, partial sequence, 500 bp fragment, strain: DSM 15502 |
AB117958 |
519 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus paracollinoides partial 16S rRNA gene, type strain DSM 15502T |
AJ786665 |
1531 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus paracollinoides gene for 16S rRNA, partial sequence, strain: JCM 11969 |
AB289231 |
608 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 11969 |
AB370878 |
1489 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 11969 |
AB473623 |
1525 |
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240427 tax ID |
* |
[Ref.: #20218] |
Lactobacillus sp. AB No.74 16S rRNA gene |
E16651 |
1524 |
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1591 tax ID |
* |
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Availability in culture collections
External links
[Ref.: #5963] |
Culture collection no. |
DSM 15502, JCM 11969, BCRC 80778, CIP 108394, LMG 22473, VTT E-042481 |
[Ref.: #76070] |
SI-ID 130842
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Literature: |
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Topic |
Title |
Authors |
Journal |
DOI |
Year |
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Phylogeny |
Lactobacillus silagei sp. nov., isolated from orchardgrass silage. |
Tohno M, Kitahara M, Irisawa T, Masuda T, Uegaki R, Ohkuma M, Tajima K |
Int J Syst Evol Microbiol |
10.1099/ijs.0.053124-0 |
2013 |
* |
Phylogeny |
Taxonomic note "Lactobacillus pastorianus" (Van Laer, 1892) a former synonym for Lactobacillus paracollinoides. |
Ehrmann MA, Vogel RF |
Syst Appl Microbiol |
10.1016/j.syapm.2004.09.007 |
2005 |
* |
Phylogeny |
Lactobacillus paracollinoides sp. nov., isolated from brewery environments. |
Suzuki K, Funahashi W, Koyanagi M, Yamashita H |
Int J Syst Evol Microbiol |
10.1099/ijs.0.02722-0 |
2004 |
* |
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References
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#5963 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 15502
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#34957 |
; Curators of the CIP;
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#76070 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID130842.1 )
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#121550 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 108394
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- * These data were automatically processed and therefore are not curated
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