Companilactobacillus versmoldensis (CCUG 54626, DSM 14857, ATCC BAA-478)

Name: Companilactobacillus versmoldensis (CCUG 54626, DSM 14857, ATCC BAA-478)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6593

Type strain

Strain Designation KU-3, BAFF Lb1201, KU-3T

Culture col. no. CCUG 54626 DSM 14857 ATCC BAA-478 NCCB 100034 KU-3 8 more

NCBI tax ID(s) 194326

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- L. Kröckel <- A. Bantleon, KU-3 JCM <-- DSM 14857 <-- L. Kröckel <-- A. Bantleon KU-3. CIP <- 2003, L. Kröckel, BAFF, Kulmbach, Germany: strain KU-3T

Links

Companilactobacillus versmoldensis KU-3 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from poultry salami.

Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 100716

ATCC BAA-478,DSM 14857,NCCB 100034,KCTC 3814,LMG 21929,CECT 5773,CCUG 54626,CIP 107931,JCM 16174,NBRC 106069

@ref 20215

Last LPSN update 2026-05-29 08:26:26

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Companilactobacillus

Species Companilactobacillus versmoldensis

Full scientific name Companilactobacillus versmoldensis (Kröckel et al. 2003) Zheng et al. 2020

Synonyms (1)

Lactobacillus versmoldensis

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123825	positive	rod-shaped
125438			92.5
125438	positive		93.599

Colony morphology

60268

Incubation period2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5581	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
38240	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
123825	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5581	positive	growth	30
38240	positive	growth	30
60268	positive	growth	30
67770	positive	growth	30
123825	positive	growth	15-37
123825	negative	growth	10
123825	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
60268	aerobe
125439	obligate aerobe	98.287

Spore formation

@ref	Spore formation	Confidence
125439		98.211

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
123825	17632 ChEBI	nitrate	+	reduction
123825	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
123825	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123825	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123825	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
123825	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123825	ornithine decarboxylase	-	4.1.1.17
123825	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123825	-	-	+	+	-	+	+	-	-	-	+	+	+	+	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
5581	-	-	-	-	-	+	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
123825	not determinedn.d.	-	-	-	-	+	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Meat
#Host	#Birds	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5581	poultry salami		Germany	DEU	Europe
60268	Poultry salami		Germany	DEU	Europe
67770	Raw fermented sausage	Versmold	Germany	DEU	Europe
123825	Poultry, raw fermented sausage	Versmold	Germany	DEU	Europe	1999

Taxonmaps

69479

Global distribution of 16S sequence LC519854 (>99% sequence identity) for Companilactobacillus from Microbeatlas

Aquatic Samples	29
Soil Samples	9
Animal Samples	260
Plant Samples	10
Total Samples	308

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5581	1	Risk group (German classification) According to TRBA 466
123825	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143429v1 assembly for Companilactobacillus versmoldensis DSM 14857 = KCTC 3814	contig	GCA_001434295	1423815.3	2700989145	1423815	66.34
67770	ASM26045v1 assembly for Companilactobacillus versmoldensis DSM 14857 = KCTC 3814	contig	GCA_000260455	1046598.4	2513237303	1423815	56.95

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lactobacillus versmoldensis partial 16S rRNA gene,type strain KU-3T	AJ496791	1610	194326
20218	Lactobacillus versmoldensis 16S ribosomal RNA gene, partial sequence	AF502292	562	194326
67770	Lactobacillus versmoldensis JCM 16174 gene for 16S rRNA, partial sequence	LC519854	1513	194326
124043	Lactobacillus versmoldensis gene for 16S rRNA, partial sequence, strain: NBRC 106069.	AB626056	1499	194326

GC content

@ref	GC-content (mol%)	Method
67770	38.3	genome sequence analysis
67770	40.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM143429v1 assembly for Companilactobacillus versmoldensis DSM 14857 = KCTC 3814
BV-BRC: 1423815.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.29	no
125439	gram_stain	BacteriaNetⓘ	positive	63.44	no
125439	motility	BacteriaNetⓘ	no	84.18	no
125439	spore_formation	BacteriaNetⓘ	no	98.21	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus versmoldensis DSM 14857 = KCTC 3814
PATRIC: 1423815.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.60	no
125438	anaerobic	anaerobicⓘ	no	85.80	no
125438	spore-forming	spore-formingⓘ	no	79.73	no
125438	aerobic	aerobicⓘ	no	70.22	yes
125438	thermophilic	thermophileⓘ	no	95.96	yes
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequence of Lactobacillus versmoldensis KCTC 3814.	Kim DS, Choi SH, Kim DW, Kim RN, Nam SH, Kang A, Kim A, Park HS	J Bacteriol	10.1128/JB.05708-11	2011
Phylogeny	Polyphasic characterization of two novel Lactobacillus spp. isolated from blown salami packages: Description of Lactobacillus halodurans sp. nov. and Lactobacillus salsicarnum sp. nov.	Schuster JA, Klingl A, Vogel RF, Ehrmann MA	Syst Appl Microbiol	10.1016/j.syapm.2019.126023	2019
Phylogeny	Lactobacillus insicii sp. nov., isolated from fermented raw meat.	Ehrmann MA, Krockel L, Lick S, Radmann P, Bantleon A, Vogel RF	Int J Syst Evol Microbiol	10.1099/ijsem.0.000705	2015
Phylogeny	Lactobacillus furfuricola sp. nov., isolated from Nukadoko, rice bran paste for Japanese pickles.	Irisawa T, Tanaka N, Kitahara M, Sakamoto M, Ohkuma M, Okada S	Int J Syst Evol Microbiol	10.1099/ijs.0.063933-0	2014
Phylogeny	Lactobacillus ginsenosidimutans sp. nov., isolated from kimchi with the ability to transform ginsenosides.	Jung HM, Liu QM, Kim JK, Lee ST, Kim SC, Im WT	Antonie Van Leeuwenhoek	10.1007/s10482-012-9868-y	2012
Phylogeny	Lactobacillus nodensis sp. nov., isolated from rice bran.	Kashiwagi T, Suzuki T, Kamakura T	Int J Syst Evol Microbiol	10.1099/ijs.0.65772-0	2009
Phylogeny	Lactobacillus versmoldensis sp. nov., isolated from raw fermented sausage.	Krockel L, Schillinger U, Franz CMAP, Bantleon A, Ludwig W	Int J Syst Evol Microbiol	10.1099/ijs.0.02387-0	2003

References

#5581	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14857
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38240	; Curators of the CIP;
#60268	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54626
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123825	Collection of Institut Pasteur ; Curators of the CIP; CIP 107931
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Companilactobacillus versmoldensis (CCUG 54626, DSM 14857, ATCC BAA-478)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001434295

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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