Companilactobacillus mindensis (DSM 14500, CCUG 48642, LMG 21932)

Name: Companilactobacillus mindensis (DSM 14500, CCUG 48642, LMG 21932)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6592

Type strain

Culture col. no. DSM 14500 CCUG 48642 LMG 21932 TMW 1.80 NBRC 107162 3 more

NCBI tax ID(s) 1423770 167481

Special Collections DSMZ CCUG JCM CIP

History <- M. Ehrmann; TMW 1.80 <- M. Müller LMG 21508 <-- M. A. Ehrmann TMW 1.80 <-- R. Müller. CIP <- 2003, R.F. Vogel, Technol. Munich Univ., Freising, Germany <- M.A. Ehrmann, Freising Weihenstephan, Germany: strain TMW 1.80

Links

Companilactobacillus mindensis DSM 14500 is an anaerobe, mesophilic, Gram-positive prokaryote that was isolated from sourdough.

Gram-positive rod-shaped anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 94683

NBRC-107162,LMG 21508,DSM 14500,LMG 21932,CCUG 48642,JCM 12532,CIP 107874

@ref 20215

Last LPSN update 2025-12-16 09:48:22

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Companilactobacillus

Species Companilactobacillus mindensis

Full scientific name Companilactobacillus mindensis (Ehrmann et al. 2003) Zheng et al. 2020

Synonyms (1)

Lactobacillus mindensis

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
120958	positive	rod-shaped
125438			93.5
125438	positive		92.657

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5377	PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231)	Medium recipe at MediaDive	Name: PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Yeast extract 5.0 g/l Na-acetate 5.0 g/l K2HPO4 2.0 g/l (NH4)3 citrate 2.0 g/l Tween 80 1.0 g/l Cysteine hydrochloride 0.5 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
40724	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
120958	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5377	positive	growth	30	mesophilic
40724	positive	growth	37	mesophilic
58268	positive	growth	30	mesophilic
67770	positive	growth	28	mesophilic
120958	positive	growth	15-37
120958	negative	growth	10
120958	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
58268	anaerobe
120958	facultative anaerobe
125439	obligate aerobe	99.2

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
120958	17632 ChEBI	nitrate	-	reduction
120958	16301 ChEBI	nitrite	-	reduction
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
120958	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120958	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120958	catalase	-	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
120958	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120958	ornithine decarboxylase	+	4.1.1.17
120958	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120958	-	-	+	+	-	+	+	+	-	-	+	+	+	+	-	-	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
120958	not determinedn.d.	-	-	-	+	+	+	-	-	-	+	+/-	+	+/-	-	-	-	-	+/-	-	-	-	+/-	-	-	-	-	+/-	+	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+/-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Fermented

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
5377	sourdough	Minden	Germany	DEU	Europe
58268	Industrial rye sourdough starter preparation (BRS)	Minden	Germany	DEU	Europe
67770	Commercial sourdough
120958	Sourdough		Germany	DEU	Europe	1995

Taxonmaps

69479

Global distribution of 16S sequence LC383831 (>99% sequence identity) for Companilactobacillus mindensis from Microbeatlas

Aquatic Samples	92
Soil Samples	1
Animal Samples	120
Plant Samples	16
Total Samples	229

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5377	1	Risk group (German classification) According to TRBA 466
120958	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143427v1 assembly for Companilactobacillus mindensis DSM 14500	scaffold	GCA_001434275	1423770.3	2660238628	1423770	52.24
67770	ASM799205v1 assembly for Companilactobacillus mindensis NBRC 107162	contig	GCA_007992055	167481.3	2936505850	167481	39.86

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lactobacillus mindensis partial 23S rRNA gene and 16S-23S IGS, strain DSM 14500	AJ616016	695	167481
20218	Lactobacillus mindensis strain DSM 14500 16S-23S ribosomal RNA large intergenic spacer, tRNA-Ile, and tRNA-Ala genes, complete sequence	AY839298	418	167481
20218	Lactobacillus mindensis strain DSM 14500 16S-23S ribosomal RNA small intergenic spacer, complete sequence	AY839299	196	167481
20218	Lactobacillus mindensis gene for 16S rRNA, partial sequence, strain: JCM 12532	AB289203	627	167481
20218	Lactobacillus sp. TMW 1.80 16S rRNA gene, strain TMW 1.80	AJ313530	1544	167481
67770	Lactobacillus mindensis JCM 12532 gene for 16S ribosomal RNA, partial sequence	LC383831	1506	167481
124043	Lactobacillus mindensis gene for 16S rRNA, partial sequence, strain: NBRC 107162.	AB626076	1492	167481

GC content

@ref	GC-content (mol%)	Method
67770	38.2	genome sequence analysis
67770	37.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Companilactobacillus mindensis DSM 14500
NCBI: GCA_001434275

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	72.60	no
125439	motility	BacteriaNetⓘ	no	55.50	no
125439	gram_stain	BacteriaNetⓘ	positive	79.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus mindensis DSM 14500
PATRIC: 1423770.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.66	no
125438	anaerobic	anaerobicⓘ	no	86.29	no
125438	spore-forming	spore-formingⓘ	no	88.20	no
125438	aerobic	aerobicⓘ	no	95.37	yes
125438	thermophilic	thermophileⓘ	no	96.97	yes
125438	flagellated	motile2+ⓘ	no	93.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family.	Lugli GA, Milani C, Turroni F, Duranti S, Mancabelli L, Mangifesta M, Ferrario C, Modesto M, Mattarelli P, Jiri K, van Sinderen D, Ventura M.	BMC Genomics	10.1186/s12864-017-3955-4	2017
Genetics	The production of esters by specific sourdough lactic acid bacteria species is limited by the precursor concentrations.	Pradal I, Weckx S, De Vuyst L.	Appl Environ Microbiol	10.1128/aem.02216-24	2025
	Relationship between dynamic changes of microorganisms in Qupi and the quality formation of Fengxiangxing Huairang Daqu.	Cao D, Lv J, Chu J, Xu S, Jin C, Zhang Y, Zhang Y, Zhang W, Kang J.	Front Microbiol	10.3389/fmicb.2024.1435765	2024
Phylogeny	Bifidobacterium jacchi sp. nov., isolated from the faeces of a baby common marmoset (Callithrix jacchus).	Modesto M, Watanabe K, Arita M, Satti M, Oki K, Sciavilla P, Patavino C, Camma C, Michelini S, Sgorbati B, Mattarelli P.	Int J Syst Evol Microbiol	10.1099/ijsem.0.003518	2019
Phylogeny	Anoxybacillus calidus sp. nov., a thermophilic bacterium isolated from soil near a thermal power plant.	Cihan AC, Cokmus C, Koc M, Ozcan B.	Int J Syst Evol Microbiol	10.1099/ijs.0.056549-0	2014
Phylogeny	Lactobacillus heilongjiangensis sp. nov., isolated from Chinese pickle.	Gu CT, Li CY, Yang LJ, Huo GC	Int J Syst Evol Microbiol	10.1099/ijs.0.053355-0	2013
Phylogeny	Molecular analysis of sourdough reveals Lactobacillus mindensis sp. nov.	Ehrmann MA, Muller MRA, Vogel RF	Int J Syst Evol Microbiol	10.1099/ijs.0.02202-0	2003

References

#5377	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14500
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40724	; Curators of the CIP;
#58268	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48642
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120958	Collection of Institut Pasteur ; Curators of the CIP; CIP 107874
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Companilactobacillus mindensis (DSM 14500, CCUG 48642, LMG 21932)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite tests

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001434275

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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