Paralactobacillus selangorensis (DSM 13344, ATCC BAA-66, CCUG 43347)

BacDive ID 6582

Type strain

Culture col. no. DSM 13344 ATCC BAA-66 CCUG 43347 CIP 106482 LMG 17710 2 more

NCBI tax ID(s) 81857

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- LMG <- G. Rusul <- J. Leisner JCM <-- CCUG 43347 <-- LMG 17710 <-- G. Rusul <-- J. J. Leisner 9-22. CIP <- 2000, LMG <- G. Rusul, DFS, Univ. Pertanian, Malaysia <- J. Leisner, DVM, Univ. Frederiksberg, Denmark

Links

Paralactobacillus selangorensis DSM 13344 is an anaerobe, Gram-positive, rod-shaped bacterium that was isolated from "chili bo".

Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 10757

LMG 17710,ATCC BAA-66,CIP 106482,NCIMB 13672,JCM 19618,DSM 13344,CCUG 43347

@ref 20215

Last LPSN update 2026-05-29 08:26:26

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Paralactobacillus

Species Paralactobacillus selangorensis

Full scientific name Paralactobacillus selangorensis Leisner et al. 2000

Synonyms (2)

Paralactobacillus selangorensis
Lactobacillus selangorensis

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
122552	positive	rod-shaped
125438	positive			92.798

Colony morphology

55805

Incubation period2-3 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5006	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
38630	MEDIUM 40- for Lactobacillus and Leuconostoc		Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)
122552	CIP Medium 40	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5006	positive	growth	30
38630	positive	growth	30
55805	positive	growth	30
67770	positive	growth	30
122552	positive	growth	15-37
122552	negative	growth	10
122552	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
55805	anaerobe
122552	facultative anaerobe
125439	obligate aerobe	93.218

Murein

@ref	Murein short key	Type
5006	A11.31	A4alpha L-Lys-D-Asp

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
122552	17632 ChEBI	nitrate	-	reduction
122552	17632 ChEBI	nitrate	+	respiration
122552	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122552	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
122552	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122552	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122552	catalase	-	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
122552	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
122552	ornithine decarboxylase	-	4.1.1.17
122552	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	ribulose monophosphate pathway	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	pentose phosphate pathway	100	11 of 11
66794	formaldehyde oxidation	100	3 of 3
66794	acetoin degradation	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	ceramide biosynthesis	100	1 of 1
66794	acetate fermentation	100	4 of 4
66794	palmitate biosynthesis	81.82	18 of 22
66794	peptidoglycan biosynthesis	80	12 of 15
66794	photosynthesis	78.57	11 of 14
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	glycolysis	76.47	13 of 17
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	phenylalanine metabolism	69.23	9 of 13
66794	octane oxidation	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	pyrimidine metabolism	64.44	29 of 45
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	ketogluconate metabolism	62.5	5 of 8
66794	purine metabolism	61.7	58 of 94
66794	vitamin B1 metabolism	61.54	8 of 13
66794	starch degradation	60	6 of 10
66794	glycogen metabolism	60	3 of 5
66794	methylglyoxal degradation	60	3 of 5
66794	flavin biosynthesis	60	9 of 15
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	non-pathway related	57.89	22 of 38
66794	propanol degradation	57.14	4 of 7
66794	oxidative phosphorylation	57.14	52 of 91
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	valine metabolism	55.56	5 of 9
66794	d-xylose degradation	54.55	6 of 11
66794	resorcinol degradation	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	CMP-KDO biosynthesis	50	2 of 4
66794	coenzyme A metabolism	50	2 of 4
66794	gluconeogenesis	50	4 of 8
66794	phenylmercury acetate degradation	50	1 of 2
66794	suberin monomers biosynthesis	50	1 of 2
66794	degradation of hexoses	50	9 of 18
66794	glycogen biosynthesis	50	2 of 4
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	sulfopterin metabolism	50	2 of 4
66794	butanoate fermentation	50	2 of 4
66794	d-mannose degradation	44.44	4 of 9
66794	glutathione metabolism	42.86	6 of 14
66794	tetrahydrofolate metabolism	42.86	6 of 14
66794	mevalonate metabolism	42.86	3 of 7
66794	glutamate and glutamine metabolism	42.86	12 of 28
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	arachidonate biosynthesis	40	2 of 5
66794	Entner Doudoroff pathway	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	lipid metabolism	38.71	12 of 31
66794	urea cycle	38.46	5 of 13
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
66794	dTDPLrhamnose biosynthesis	37.5	3 of 8
66794	degradation of sugar alcohols	37.5	6 of 16
66794	isoleucine metabolism	37.5	3 of 8
66794	proline metabolism	36.36	4 of 11
66794	metabolism of disaccharids	36.36	4 of 11
66794	isoprenoid biosynthesis	34.62	9 of 26
66794	alanine metabolism	34.48	10 of 29
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	lipid A biosynthesis	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	L-lactaldehyde degradation	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	chorismate metabolism	33.33	3 of 9
66794	sulfate reduction	30.77	4 of 13
66794	methionine metabolism	30.77	8 of 26
66794	threonine metabolism	30	3 of 10
66794	arginine metabolism	29.17	7 of 24
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	tyrosine metabolism	28.57	4 of 14
66794	cysteine metabolism	27.78	5 of 18
66794	ascorbate metabolism	27.27	6 of 22
66794	vitamin B6 metabolism	27.27	3 of 11
66794	tryptophan metabolism	26.32	10 of 38
66794	lysine metabolism	26.19	11 of 42
66794	phenol degradation	25	5 of 20
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	toluene degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	leucine metabolism	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	CO2 fixation in Crenarchaeota	22.22	2 of 9
66794	citric acid cycle	21.43	3 of 14
66794	histidine metabolism	20.69	6 of 29

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122552	-	-	-	-	-	+	+	+	-	-	+	+	-	-	-	+	+	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
122552	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	+/-	+/-	+/-	+/-	-	-	-	+/-	-	-	-	-	-	-	+/-	-	-	+/-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Food

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5006	"chili bo"		Malaysia	MYS	Asia
55805	Chili bo		Malaysia	MYS	Asia
67770	Chili bo, a Malaysian food ingredient	Pataling Jaya, Selangor DE	Malaysia	MYS	Asia
122552	Chili bo		Malaysia	MYS	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC589221 (>99% sequence identity) for Lactobacillus selangorensis subclade from Microbeatlas

Aquatic Samples	166
Soil Samples	252
Animal Samples	2101
Plant Samples	94
Total Samples	2613

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5006	1	Risk group (German classification) According to TRBA 466
122552	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM143720v1 assembly for Lactobacillus selangorensis DSM 13344	contig	GCA_001437205	81857.4	2663763515	81857	72.44
67770	ASM143680v1 assembly for Lactobacillus selangorensis ATCC BAA-66	scaffold	GCA_001436805		2671180369	81857	44.31

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5006	Paralactobacillus selangorensis strain LMG 17710 16S ribosomal RNA (rrs) gene, partial sequence	AF049745	1495		81857
67770	Lactobacillus selangorensis JCM 19618 gene for 16S rRNA, partial sequence	LC589221	1494		81857

GC content

@ref	GC-content (mol%)	Method
5006	46	high performance liquid chromatography (HPLC)
67770	46.1	high performance liquid chromatography (HPLC)
67770	46	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM143720v1 assembly for Lactobacillus selangorensis DSM 13344
NCBI: GCA_001437205

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.22	no
125439	gram_stain	BacteriaNetⓘ	variable	60.67	no
125439	motility	BacteriaNetⓘ	yes	51.74	no
125439	spore_formation	BacteriaNetⓘ	yes	49.99	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus selangorensis strain DSM 13344
PATRIC: 81857.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.80	no
125438	anaerobic	anaerobicⓘ	no	81.93	no
125438	aerobic	aerobicⓘ	no	94.48	yes
125438	spore-forming	spore-formingⓘ	no	86.07	no
125438	thermophilic	thermophileⓘ	no	95.00	no
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Lactobacillus sakei: A Starter for Sausage Fermentation, a Protective Culture for Meat Products.	Zagorec M, Champomier-Verges MC.	Microorganisms	10.3390/microorganisms5030056	2017
Phylogeny	Reclassification of Paralactobacillus selangorensis Leisner et al. 2000 as Lactobacillus selangorensis comb. nov.	Haakensen M, Pittet V, Ziola B	Int J Syst Evol Microbiol	10.1099/ijs.0.027755-0	2011
Phylogeny	Lactobacillus shenzhenensis sp. nov., isolated from a fermented dairy beverage.	Zou Y, Liu F, Fang C, Wan D, Yang R, Su Q, Yang R, Zhao J	Int J Syst Evol Microbiol	10.1099/ijs.0.041111-0	2012
Phylogeny	Description of Paralactobacillus selangorensis gen. nov., sp. nov., a new lactic acid bacterium isolated from chili bo, a Malaysian food ingredient.	Leisner JJ, Vancanneyt M, Goris J, Christensen H, Rusul G	Int J Syst Evol Microbiol	10.1099/00207713-50-1-19	2000

References

#5006	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13344
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38630	; Curators of the CIP;
#55805	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 43347
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122552	Collection of Institut Pasteur ; Curators of the CIP; CIP 106482
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Paralactobacillus selangorensis (DSM 13344, ATCC BAA-66, CCUG 43347)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Murein

Metabolite utilization

Antibiotic resistance

Metabolite tests

Enzymes

Pathway annotation

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001437205

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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