Name: Apilactobacillus kunkeei YH-15
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6572

Type strain:

Species: Apilactobacillus kunkeei

Strain Designation: YH-15

Culture col. no.: CCUG 53901, CIP 107675, DSM 12361, ATCC 700308, JCM 16173, LMG 18925

Strain history: CIP <- 2002, ATCC <- Huang et al. <- C.G. Edwards: strain YH-15

NCBI tax ID(s): 148814 (species)

SI-ID 12779

LMG 18925, ATCC 700308, DSM 12361, CCUG 53901, CIP 107675, JCM 16173

Special Collections

Section

Apilactobacillus kunkeei YH-15 is an aerobe, Gram-positive bacterium that was isolated from commercial grape wine undergoing a sluggish/stuck alcoholic fermentation.

Gram-positive
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Apilactobacillus*
	Species	**Apilactobacillus kunkeei**
	Full Scientific Name (LPSN)	Apilactobacillus kunkeei (Edwards et al. 1998) Zheng et al. 2020

Synonym

Lactobacillus kunkeei

Information on morphological and physiological properties Morphology

[Ref.: #120511]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %93.104

[Ref.: #120511]	Cell shape	rod-shaped

[Ref.: #120511]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4620]

Culture medium

PEDIOCOCCUS DAMNOSUS MEDIUM (DSMZ Medium 231)

[Ref.: #4620]

Culture medium growth

[Ref.: #4620]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4620]

Culture medium composition

expand / minimize

[Ref.: #40718]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #40718]

Culture medium growth

[Ref.: #40718]

Culture medium composition

expand / minimize

[Ref.: #120511]

Culture medium

CIP Medium 40

[Ref.: #120511]

Culture medium growth

[Ref.: #120511]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4620]		growth	30 °C
[Ref.: #40718]		growth	30 °C
[Ref.: #60069]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #120511]		growth	22-37 °C
[Ref.: #120511]	no	growth	10 °C
[Ref.: #120511]	no	growth	15 °C
[Ref.: #120511]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #60069]	Oxygen tolerance	aerobe
[Ref.: #120511]	Oxygen tolerance	obligate aerobe

[Ref.: #4620]	Murein short key	A11.31
[Ref.: #4620]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #120511]	nitrate ChEBI	-	reduction
[Ref.: #120511]	nitrate ChEBI	-	respiration
[Ref.: #120511]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120511]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #120511]		acetoin ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120511]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120511]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120511]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120511]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120511]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #4620]	14291	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #4620]	14290	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+/-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #120511]	11083	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120511]	10556	-	-	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	acetoin degradation	100	3 of 3
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	photosynthesis	71.43	10 of 14
[Ref.: #66794]	purine metabolism	70.21	66 of 94
[Ref.: #66794]	serine metabolism	66.67	6 of 9
[Ref.: #66794]	chorismate metabolism	66.67	6 of 9
[Ref.: #66794]	sphingosine metabolism	66.67	4 of 6
[Ref.: #66794]	valine metabolism	66.67	6 of 9
[Ref.: #66794]	NAD metabolism	66.67	12 of 18
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	pentose phosphate pathway	63.64	7 of 11
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	gluconeogenesis	62.5	5 of 8
[Ref.: #66794]	pyrimidine metabolism	62.22	28 of 45
[Ref.: #66794]	methionine metabolism	61.54	16 of 26
[Ref.: #66794]	leucine metabolism	61.54	8 of 13
[Ref.: #66794]	methylglyoxal degradation	60	3 of 5
[Ref.: #66794]	tetrahydrofolate metabolism	57.14	8 of 14
[Ref.: #66794]	degradation of sugar alcohols	56.25	9 of 16
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	proline metabolism	54.55	6 of 11
[Ref.: #66794]	glutamate and glutamine metabolism	53.57	15 of 28
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	sulfopterin metabolism	50	2 of 4
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	suberin monomers biosynthesis	50	1 of 2
[Ref.: #66794]	tryptophan metabolism	47.37	18 of 38
[Ref.: #66794]	non-pathway related	47.37	18 of 38
[Ref.: #66794]	oxidative phosphorylation	46.15	42 of 91
[Ref.: #66794]	arginine metabolism	45.83	11 of 24
[Ref.: #66794]	d-mannose degradation	44.44	4 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	44.44	4 of 9
[Ref.: #66794]	propanol degradation	42.86	3 of 7
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	ubiquinone biosynthesis	42.86	3 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	42.86	3 of 7
[Ref.: #66794]	lysine metabolism	40.48	17 of 42
[Ref.: #66794]	propionate fermentation	40	4 of 10
[Ref.: #66794]	Entner Doudoroff pathway	40	4 of 10
[Ref.: #66794]	glycogen metabolism	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	urea cycle	38.46	5 of 13
[Ref.: #66794]	isoleucine metabolism	37.5	3 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	alanine metabolism	34.48	10 of 29
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	L-lactaldehyde degradation	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	glycine metabolism	30	3 of 10
[Ref.: #66794]	citric acid cycle	28.57	4 of 14
[Ref.: #66794]	vitamin B6 metabolism	27.27	3 of 11
[Ref.: #66794]	isoprenoid biosynthesis	26.92	7 of 26
[Ref.: #66794]	flavin biosynthesis	26.67	4 of 15
[Ref.: #66794]	lipid metabolism	25.81	8 of 31
[Ref.: #66794]	degradation of pentoses	25	7 of 28
[Ref.: #66794]	glycogen biosynthesis	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	histidine metabolism	24.14	7 of 29
[Ref.: #66794]	sulfate reduction	23.08	3 of 13
[Ref.: #66794]	degradation of hexoses	22.22	4 of 18
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
[Ref.: #66794]	glutathione metabolism	21.43	3 of 14
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4620]	Sample type/isolated from	commercial grape wine undergoing a sluggish/stuck alcoholic fermentation
[Ref.: #4620]	Country	USA
[Ref.: #4620]	Country ISO 3 Code	USA
[Ref.: #4620]	Continent	North America

[Ref.: #60069]	Sample type/isolated from	Partially fermented grape juice
[Ref.: #60069]	Geographic location (country and/or sea, region)	California
[Ref.: #60069]	Country	USA
[Ref.: #60069]	Country ISO 3 Code	USA
[Ref.: #60069]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Commercial Cabernet Sauvignon wine

[Ref.: #120511]	Sample type/isolated from	Partially fermented grape juice
[Ref.: #120511]	Geographic location (country and/or sea, region)	California
[Ref.: #120511]	Country	United States of America
[Ref.: #120511]	Country ISO 3 Code	USA
[Ref.: #120511]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Fermented
#Host Body-Site	#Plant	#Fruit (Seed)
#Engineered	#Food production	#Beverage

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Y11374 (>99% sequence identity) for Apilactobacillus kunkeei from Microbeatlas

Aquatic Samples	245
Soil Samples	270
Animal Samples	6066
Plant Samples	201
Total Samples	6782

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4620]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120511]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4620]	Lactobacillus kunkeei rRNA gene	Y11374	1517	GenBank ENA	1423768 tax ID
[Ref.: #67770]	Lactobacillus kunkeei JCM 16173 gene for 16S rRNA, partial sequence	LC519853	1513	GenBank ENA	148814 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Apilactobacillus kunkeei DSM 12361 = ATCC 700308	GCA_001433825	scaffold	GenBank ENA	1423768 tax ID
[Ref.: #67770]	Apilactobacillus kunkeei DSM 12361 = ATCC 700308 YH-15	GCA_001281265	contig	GenBank ENA	1423768 tax ID
[Ref.: #66792]	Lactobacillus kunkeei DSM 12361 = ATCC 700308	1423768.4	wgs	PATRIC	1423768 tax ID	*
[Ref.: #66792]	Lactobacillus kunkeei DSM 12361 = ATCC 700308	1423768.3	wgs	PATRIC	1423768 tax ID	*
[Ref.: #66792]	Apilactobacillus kunkeei YH-15	2513237005	draft	JGI IMG/M	1423768 tax ID	*
[Ref.: #66792]	Apilactobacillus kunkeei DSM 12361	2660237901	draft	JGI IMG/M	1423768 tax ID	*

[Ref.: #67770]

GC-content

36.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus kunkeei DSM 12361 = ATCC 700308 PATRIC: 1423768.4
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	93.104	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	82.654	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	87.902	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	81.169	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.417	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	91.5	no

Availability in culture collections External links

[Ref.: #4620]

Culture collection no.

CCUG 53901, CIP 107675, DSM 12361, ATCC 700308, JCM 16173, LMG 18925

[Ref.: #76046]

SI-ID 12779

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Biochemical characterization of a GH70 protein from Lactobacillus kunkeei DSM 12361 with two catalytic domains involving branching sucrase activity.	Meng X, Gangoiti J, Wang X, Grijpstra P, van Leeuwen SS, Pijning T, Dijkhuizen L	Appl Microbiol Biotechnol	10.1007/s00253-018-9236-6	2018	*
Phylogeny	Lactobacillus kosoi sp. nov., a fructophilic species isolated from koso, a Japanese sugar-vegetable fermented beverage.	Chiou TY, Suda W, Oshima K, Hattori M, Matsuzaki C, Yamamoto K, Takahashi T	Antonie Van Leeuwenhoek	10.1007/s10482-018-1019-7	2018	*
Phylogeny	Lactobacillus kunkeei sp. nov.: a spoilage organism associated with grape juice fermentations.	Edwards CG, Haag KM, Collins MD, Hutson RA, Huang YC	J Appl Microbiol	10.1046/j.1365-2672.1998.00399.x	1998	*
Biotechnology	Characterization of the (Engineered) Branching Sucrase GtfZ-CD2 from Apilactobacillus kunkeei for Efficient Glucosylation of Benzenediol Compounds.	Meng X, Li X, Pijning T, Wang X, van Leeuwen SS, Dijkhuizen L, Chen G, Liu W	Appl Environ Microbiol	10.1128/aem.01031-22	2022	*
	Antagonistic Activity of Potentially Probiotic Lactic Acid Bacteria against Honeybee (Apis mellifera L.) Pathogens.	Leska A, Nowak A, Szulc J, Motyl I, Czarnecka-Chrebelska KH	Pathogens	10.3390/pathogens11111367	2022	*

References

#4620

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12361

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#40718 ; Curators of the CIP;
#60069 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53901

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76046

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12779.1 )

#120511 Collection of Institut Pasteur ; Curators of the CIP; CIP 107675
* These data were automatically processed and therefore are not curated

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Lactobacillus kunkeei DSM 12361 = ATCC 700308

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