Lactobacillus sakei subsp. sakei T.S. is a microaerophile, mesophilic, Gram-positive prokaryote that was isolated from "Moto" starter of sake.
Gram-positive rod-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Lactobacillus |
| Species Lactobacillus sakei subsp. sakei |
| Full scientific name Lactobacillus sakei subsp. sakei corrig. (Katagiri et al. 1934) Torriani et al. 1996 |
| Synonyms (2) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8430 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 41837 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 122357 | CIP Medium 40 | Medium recipe at CIP |
| 8430 | Compoundlactic acid racemase |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8430 | A11.31 | A4alpha L-Lys-D-Asp |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 122357 | 17632 ChEBI | nitrate | - | builds gas from | |
| 122357 | 17632 ChEBI | nitrate | - | reduction | |
| 122357 | 17632 ChEBI | nitrate | + | respiration | |
| 122357 | 16301 ChEBI | nitrite | - | builds gas from | |
| 122357 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 122357 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | + | - | - | + | - | + | + | + | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | |
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | + | - | - | + | - | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | |
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | +/- | - | - | + | - | + | + | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | |
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 8430 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | + | - | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | +/- | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Food production | #Fermented | |
| #Engineered | #Food production | #Beverage |
Global distribution of 16S sequence AM113784 (>99% sequence identity) for Latilactobacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM237035v1 assembly for Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 LT-13 | complete | 1423833 | 98.81 | ||||
| 67770 | ASM435447v1 assembly for Latilactobacillus sakei subsp. sakei ATCC 15521 | contig | 214326 | 73.33 | ||||
| 66792 | ASM2982353v1 assembly for Latilactobacillus sakei LMG 9468 | contig | 1599 | 71.65 | ||||
| 67770 | ASM143406v1 assembly for Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 | contig | 1423833 | 70.86 | ||||
| 66792 | ASM798916v1 assembly for Latilactobacillus sakei subsp. sakei NBRC 15893 | contig | 214326 | 68.86 | ||||
| 67770 | ASM61536v1 assembly for Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 | contig | 1423833 | 33.92 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus sakei ATCC 15521 16S ribosomal RNA gene, partial sequence | AF429523 | 512 | 1599 | ||
| 20218 | Lactobacillus sakei strain ATCC 15521 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF429610 | 548 | 1599 | ||
| 20218 | Lactobacillus sake 16S/23S ribosomal RNA small intergenic spacer region, complete sequence | U97131 | 226 | 1599 | ||
| 20218 | Lactobacillus sake 16S/23S ribosomal RNA large intergenic spacer region, tRNA-Ile and tRNA-Ala genes, complete sequence | U97137 | 436 | 1599 | ||
| 20218 | Lactobacillus sakei partial 16S rRNA gene, strain type strain:DSM 20017 | AM113784 | 1561 | 1599 | ||
| 20218 | Lactobacillus sakei subsp. sakei strain DSM 20017 16S small subunit ribosomal RNA gene, partial sequence | AY204893 | 1406 | 214326 | ||
| 20218 | Lactobacillus sake 16S ribosomal RNA | M58829 | 1523 | 1599 | ||
| 20218 | Lactobacillus sakei subsp. sakei gene for 16S rRNA, partial sequence, strain: JCM 1157 | AB289292 | 653 | 214326 | ||
| 67770 | Lactobacillus sakei subsp. sakei gene for 16S ribosomal RNA, partial sequence, strain: JCM 1157 | LC064899 | 1521 | 214326 | ||
| 124043 | Lactobacillus sakei subsp. sakei gene for 16S rRNA, partial sequence, strain: NBRC 15893. | AB680993 | 1499 | 214326 | ||
| 124043 | Latilactobacillus sakei subsp. sakei ATCC 15521 gene for 16S ribosomal RNA, partial sequence. | LC765289 | 1477 | 214326 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 98.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 75.60 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 56.10 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 53.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.74 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 91.07 | yes |
| 125438 | aerobic | aerobicⓘ | no | 94.05 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 86.56 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.97 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.00 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| Distribution, inducibility, and characterisation of prophages in Latilactobacillus sakei. | Ambros CL, Ehrmann MA. | BMC Microbiol | 10.1186/s12866-022-02675-y | 2022 | |
| Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706. | Chung KS, Choi JW, Shin JS, Kim SY, Han HS, Kim SY, Lee KY, Kang JY, Cho CW, Hong HD, Rhee YK, Lee KT. | Foods | 10.3390/foods10123034 | 2021 | |
| High-Fat-Diet-Induced Oxidative Stress Linked to the Increased Colonization of Lactobacillus sakei in an Obese Population. | Lee JY, Bae E, Kim HY, Lee KM, Yoon SS, Lee DC. | Microbiol Spectr | 10.1128/spectrum.00074-21 | 2021 | |
| Effect of Fermentation Duration on the Quality Changes of Godulbaegi Kimchi. | Park JM, Zhang BZ, Kim JM. | Foods | 10.3390/foods11071020 | 2022 | |
| Rapid Acidification and Off-Flavor Reduction of Pea Protein by Fermentation with Lactic Acid Bacteria and Yeasts. | Zipori D, Hollmann J, Rigling M, Zhang Y, Weiss A, Schmidt H. | Foods | 10.3390/foods13040588 | 2024 | |
| In Vitro Anti-Candida albicans Mode of Action of Enterococcus mundtii and Enterococcus faecium. | Todorov SD, Weeks R, Popov I, Franco BDGM, Chikindas ML. | Microorganisms | 10.3390/microorganisms11030602 | 2023 | |
| Two genes encoding the beta-galactosidase of Lactobacillus sake. | Obst M, Meding ER, Vogel RF, Hammes WP. | Microbiology (Reading) | 10.1099/13500872-141-12-3059 | 1995 | |
| Single-crossover integration in the Lactobacillus sake chromosome and insertional inactivation of the ptsI and lacL genes. | Leloup L, Ehrlich SD, Zagorec M, Morel-Deville F. | Appl Environ Microbiol | 10.1128/aem.63.6.2117-2123.1997 | 1997 | |
| Radiation resistance of lactobacilli isolated from radurized meat relative to growth and environment. | Hastings JW, Holzapfel WH, Niemand JG. | Appl Environ Microbiol | 10.1128/aem.52.4.898-901.1986 | 1986 | |
| Influence of Heat Treatment and Lactic Acid Fermentation on the Physical and Chemical Properties of Pumpkin Juice. | Janiszewska-Turak E, Rybak K, Witrowa-Rajchert D, Pobiega K, Wierzbicka A, Ossowski S, Sekul J, Kufel A, Wisniewska A, Trych U, Szczepanska-Stolarczyk J, Krzykowski A, Gramza-Michalowska A. | Molecules | 10.3390/molecules29194519 | 2024 | |
| Synergistic Effect of Combination of Various Microbial Hurdles in the Biopreservation of Meat and Meat Products-Systematic Review. | Karbowiak M, Szymanski P, Zielinska D. | Foods | 10.3390/foods12071430 | 2023 | |
| Engineering circular bacteriocins: structural and functional effects of alpha-helix exchanges and disulfide introductions in circularin A. | Liu F, van Heel AJ, Kuipers OP. | Front Microbiol | 10.3389/fmicb.2024.1337647 | 2024 | |
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| Bacteriocin production and inhibition of Listeria monocytogenes by Lactobacillus sakei subsp. sakei 2a in a potentially synbiotic cheese spread. | Martinez RC, Staliano CD, Vieira AD, Villarreal ML, Todorov SD, Saad SM, Franco BD. | Food Microbiol | 10.1016/j.fm.2014.12.010 | 2015 | |
| Bioluminescent monitoring of recombinant lactic acid bacteria and their products. | Choi IY, Oh J-H, Wang Z, van Pijkeren J-P. | mBio | 10.1128/mbio.01197-23 | 2023 | |
| Production of nisin by Lactococcus lactis in media with skimmed milk. | Penna TC, Jozala AF, De Lencastre Novaes LC, Pessoa A, Cholewa O. | Appl Biochem Biotechnol | 10.1385/abab:122:1-3:0619 | 2005 | |
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| Genomic identification of meat Lactobacilli as Lactobacillus sake. | Champomier MC, Montel MC, Grimont F, Grimont PA. | Ann Inst Pasteur Microbiol | 10.1016/0769-2609(87)90153-0 | 1987 | |
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| Interactions of nisin and pediocin PA-1 with closely related lactic acid bacteria that manifest over 100-fold differences in bacteriocin sensitivity. | Bennik MH, Verheul A, Abee T, Naaktgeboren-Stoffels G, Gorris LG, Smid EJ. | Appl Environ Microbiol | 10.1128/aem.63.9.3628-3636.1997 | 1997 | |
| Novel surface display system for proteins on non-genetically modified gram-positive bacteria. | Bosma T, Kanninga R, Neef J, Audouy SA, van Roosmalen ML, Steen A, Buist G, Kok J, Kuipers OP, Robillard G, Leenhouts K. | Appl Environ Microbiol | 10.1128/aem.72.1.880-889.2006 | 2006 | |
| Frequency of bacteriocin resistance development and associated fitness costs in Listeria monocytogenes. | Gravesen A, Jydegaard Axelsen AM, Mendes da Silva J, Hansen TB, Knochel S. | Appl Environ Microbiol | 10.1128/aem.68.2.756-764.2002 | 2002 | |
| Antioxidant Activity and Other Characteristics of Lactic Acid Bacteria Isolated from Korean Traditional Sweet Potato Stalk Kimchi. | Park JM, Moon JW, Zhang BZ, An BK. | Foods | 10.3390/foods13203261 | 2024 | |
| Mechanisms underlying enhanced IgA production in Peyer's patch cells by membrane vesicles derived from Lactobacillus sakei. | Miyoshi Y, Saika A, Nagatake T, Matsunaga A, Kunisawa J, Katakura Y, Yamasaki-Yashiki S. | Biosci Biotechnol Biochem | 10.1093/bbb/zbab065 | 2021 | |
| Utilization of Probiotic-Derived Extracellular Vesicles as Postbiotics and Their Role in Mental Health Therapeutics. | Baek J, Lee S, Lee J, Park J, Choi E, Kang SS. | Food Sci Anim Resour | 10.5851/kosfa.2024.e92 | 2024 | |
| High productivity of immunostimulatory membrane vesicles of Limosilactobacillus antri using glycine. | Yamasaki-Yashiki S, Sakamoto Y, Nishimura K, Saika A, Ito T, Kunisawa J, Katakura Y. | Biosci Microbiota Food Health | 10.12938/bmfh.2023-029 | 2024 | |
| A critical evaluation of methodological and mechanistic insights on probiotic-derived extracellular vesicles. | Ronacher C, Gonzalez CF, Lorca GL. | Front Nutr | 10.3389/fnut.2025.1632232 | 2025 | |
| Novel Horizons in Postbiotics: Lactobacillaceae Extracellular Vesicles and Their Applications in Health and Disease. | Gonzalez-Lozano E, Garcia-Garcia J, Galvez J, Hidalgo-Garcia L, Rodriguez-Nogales A, Rodriguez-Cabezas ME, Sanchez M. | Nutrients | 10.3390/nu14245296 | 2022 | |
| RNA-Based Anti-Inflammatory Effects of Membrane Vesicles Derived from Lactiplantibacillus plantarum. | Yamasaki-Yashiki S, Kawashima F, Saika A, Hosomi R, Kunisawa J, Katakura Y. | Foods | 10.3390/foods13060967 | 2024 | |
| Characteristics of alanine racemase in Lactobacillus sakeiZH-2 strain. | Kanauchi M, Matsumoto N. | Food Sci Nutr | 10.1002/fsn3.3452 | 2023 | |
| Extracellular Vesicles of Probiotics: Shedding Light on the Biological Activity and Future Applications. | Krzyzek P, Marinacci B, Vitale I, Grande R. | Pharmaceutics | 10.3390/pharmaceutics15020522 | 2023 | |
| Classification of Latilactobacillus sakei subspecies based on MALDI-TOF MS protein profiles using machine learning models. | Kim E, Yang S-M, Lee S-Y, Jung D-H, Kim H-Y. | Microbiol Spectr | 10.1128/spectrum.03668-23 | 2024 | |
| Investigation of Bacteriocin Production Ability of Pediococcus acidilactici JM01 and Probiotic Properties Isolated From Tarak, a Conventional Korean Fermented Milk. | Ahn H, Lee HJ. | Food Sci Nutr | 10.1002/fsn3.71003 | 2025 | |
| Diversity of a Lactic Acid Bacterial Community during Fermentation of Gajami-Sikhae, a Traditional Korean Fermented Fish, as Determined by Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. | Kim E, Won JE, Yang SM, Kim HJ, Kim HY. | Foods | 10.3390/foods11070909 | 2022 | |
| Comparison of Real-Time PCR and Droplet Digital PCR for the Quantitative Detection of Lactiplantibacillus plantarum subsp. plantarum | Choi CH, Kim E, Yang SM, Kim DS, Suh SM, Lee GY, Kim HY. | Foods | 10.3390/foods11091331 | 2022 | |
| Differentiation of Lacticaseibacillus zeae Using Pan-Genome Analysis and Real-Time PCR Method Targeting a Unique Gene. | Kim E, Yang SM, Kim HY. | Foods | 10.3390/foods10092112 | 2021 | |
| GABA-Producing Lactococcus lactis Strains Isolated from Camel's Milk as Starters for the Production of GABA-Enriched Cheese. | Redruello B, Saidi Y, Sampedro L, Ladero V, Del Rio B, Alvarez MA. | Foods | 10.3390/foods10030633 | 2021 | |
| Structural and functional analysis of the gene cluster encoding the enzymes of the arginine deiminase pathway of Lactobacillus sake. | Zuniga M, Champomier-Verges M, Zagorec M, Perez-Martinez G. | J Bacteriol | 10.1128/jb.180.16.4154-4159.1998 | 1998 | |
| Phylogenomic analysis in Latilactobacillus sakei by using polymorphisms detected by next-generation sequencing. | Nishiyama C, Sekiguchi S, Sugihara Y, Nishikawa M, Makita N, Segawa T, Terasaki M, Takagi H, Koyanagi T. | Biosci Microbiota Food Health | 10.12938/bmfh.2022-017 | 2023 | |
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| Hydrolysis of pork muscle sarcoplasmic proteins by lactobacillus curvatus and lactobacillus sake. | Fadda S, Sanz Y, Vignolo G, Aristoy M, Oliver G, Toldra F. | Appl Environ Microbiol | 10.1128/aem.65.2.578-584.1999 | 1999 | |
| An exported inducer peptide regulates bacteriocin production in Enterococcus faecium CTC492. | Nilsen T, Nes IF, Holo H. | J Bacteriol | 10.1128/jb.180.7.1848-1854.1998 | 1998 | |
| Identification and characterization of bacteriocin biosynthetic gene clusters found in multiple bacteriocins producing Lactiplantibacillus plantarum PUK6. | Kawahara A, Zendo T, Matsusaki H | J Biosci Bioeng | 10.1016/j.jbiosc.2022.01.008 | 2022 | |
| Lactobacillus curvatus subsp. curvatus subsp. nov. and Lactobacillus curvatus subsp. melibiosus subsp. nov. and Lactobacillus sake subsp. sake subsp. nov. and Lactobacillus sake subsp. carnosus subsp. nov., new subspecies of Lactobacillus curvatus Abo-Elnaga and Kandler 1965 and Lactobacillus sake Katagiri, Kitahara, and Fukami 1934 (Klein et al. 1996, emended descriptions), respectively. | Torriani S, Van Reenen GA, Klein G, Reuter G, Dellaglio F, Dicks LM. | Int J Syst Bacteriol | 10.1099/00207713-46-4-1158 | 1996 |
| #8430 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41837 | ; Curators of the CIP; |
| #50121 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30501 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122357 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103139 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data