Lacticaseibacillus paracasei subsp. paracasei RO94 is an anaerobe, Gram-positive, rod-shaped bacterium that was isolated from Milk products.
Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Lacticaseibacillus |
| Species Lacticaseibacillus paracasei subsp. paracasei |
| Full scientific name Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2263 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 34920 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 121547 | CIP Medium 40 | Medium recipe at CIP |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 2263 | A11.31 | A4alpha L-Lys-D-Asp |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 121547 | 17632 ChEBI | nitrate | - | reduction | |
| 121547 | 17632 ChEBI | nitrate | + | respiration | |
| 121547 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 121547 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 121547 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 121547 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 121547 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121547 | ornithine decarboxylase | - | 4.1.1.17 | |
| 121547 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | + | - | + | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | - | + | - | - | + | - | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | + | - | - | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | - | + | - | - | + | - | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | - | + | - | + | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | + | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | + | - | + | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | + | - | - | |
| 2263 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | + | - | + | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | |
| 121547 | not determinedn.d. | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | +/- | - | - | +/- | - | +/- | - | - | - | - | - | +/- | - | +/- | - | - | - | - | +/- | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Food production | #Dairy product | |
| #Host Body Product | #Fluids | #Milk |
Global distribution of 16S sequence LC096209 (>99% sequence identity) for Lactobacillaceae from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM82903v1 assembly for Lacticaseibacillus paracasei subsp. paracasei JCM 8130 | complete | 47714 | 96.66 | ||||
| 66792 | ASM798912v1 assembly for Lacticaseibacillus paracasei subsp. paracasei NBRC 15889 | contig | 47714 | 51.45 | ||||
| 67770 | ASM435465v1 assembly for Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 | scaffold | 47714 | 51.23 | ||||
| 67770 | ASM143638v1 assembly for Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130 | contig | 525337 | 44.3 | ||||
| 67770 | ASM15949v1 assembly for Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130 | scaffold | 525337 | 43.85 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus paracasei strain ATCC 25302 16S ribosomal RNA gene, partial sequence | HQ423165 | 1441 | 1597 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei strain CECT 4022 16S ribosomal RNA gene, partial sequence | AY196966 | 525 | 47714 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei genes for 16S rRNA, 16S-23S internal transcribed spacer, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:JCM 8130 | AB237506 | 572 | 47714 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei genes for 16S rRNA, 16S-23S internal transcribed spacer, 23S rRNA, partial sequence, strain:JCM 8130 | AB237507 | 364 | 47714 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei gene for 16S rRNA, partial sequence, strain: JCM 8130 | AB289225 | 670 | 47714 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei gene for 16S rRNA, partial sequence | D79212 | 1522 | 47714 | ||
| 20218 | Lactobacillus paracasei subsp. paracasei gene for 16S rRNA, partial sequence, strain: NBRC 15889 | AB626054 | 1495 | 47714 | ||
| 20218 | Lacticaseibacillus paracasei subsp. paracasei gene for 16S rRNA, partial sequence, strain: YIT 0209 (= NCDO 151) | AB008205 | 1561 | 1582 | ||
| 67770 | Lactobacillus paracasei subsp. paracasei gene for 16S ribosomal RNA, partial sequence, strain: JCM 8130 | LC096209 | 1511 | 47714 | ||
| 124043 | Lactobacillus paracasei strain NBRC 15889 16S ribosomal RNA gene, partial sequence. | MK852178 | 691 | 1597 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 46.5 | genome sequence analysis |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 94.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 83.90 | no |
| 125439 | motility | BacteriaNetⓘ | no | 58.10 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 85.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.81 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 90.01 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 81.13 | no |
| 125438 | aerobic | aerobicⓘ | no | 93.79 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 95.00 | no |
| 125438 | flagellated | motile2+ⓘ | no | 92.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Biotechnology | Manipulating the growth environment through co-culture to enhance stress tolerance and viability of probiotic strains in the gastrointestinal tract. | Oana K, Shimizu K, Takada T, Makino H, Yamazaki M, Katto M, Ando M, Kurakawa T, Oishi K. | Appl Environ Microbiol | 10.1128/aem.01502-23 | 2023 | |
| Viability-PCR for the selective detection of Lactobacillus acidophilus and Bifidobacterium bifidum in live bacteria-containing products. | Catone S, Iannantuono S, Genovese D, Von Hunolstein C, Franciosa G. | Front Microbiol | 10.3389/fmicb.2024.1400529 | 2024 | ||
| Detection of Listeria monocytogenes in foods with a textile organic electrochemical transistor biosensor. | Vizzini P, Beltrame E, Coppede N, Vurro F, Andreatta F, Torelli E, Manzano M. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12543-y | 2023 | ||
| Molecular patterns from a human gut-derived Lactobacillus strain suppress pathogenic infiltration of leukocytes into the central nervous system. | Sanchez JMS, Doty DJ, DePaula-Silva AB, Brown DG, Bell R, Klag KA, Truong A, Libbey JE, Round JL, Fujinami RS. | J Neuroinflammation | 10.1186/s12974-020-01959-2 | 2020 | ||
| Cas9-independent tracrRNA cytotoxicity in Lacticaseibacillus paracasei. | Arifah AQ, Vento JM, Kurrer I, Achmedov T, Beisel CL. | Microlife | 10.1093/femsml/uqaf013 | 2025 | ||
| Enhanced preservation of viability and species stratification in Lacticaseibacillus group using levan-fortified skim milk as a cryoprotectant during freeze-drying. | Yavuz M, Erginer M, Kasavi C, Toksoy Oner E. | Food Sci Biotechnol | 10.1007/s10068-024-01802-x | 2025 | ||
| Indigenous Lactic Acid Bacteria Isolated from Raw Graviera Cheese and Evaluation of Their Most Important Technological Properties. | Psomas E, Sakaridis I, Boukouvala E, Karatzia MA, Ekateriniadou LV, Samouris G. | Foods | 10.3390/foods12020370 | 2023 | ||
| Lipid discovery enabled by sequence statistics and machine learning. | Christensen PM, Martin J, Uppuluri A, Joyce LR, Wei Y, Guan Z, Morcos F, Palmer KL. | Elife | 10.7554/elife.94929 | 2024 | ||
| Clinical Potential of Novel Microbial Therapeutic LP51 Based on Xerosis-Microbiome Index. | Kim S, Rahim MA, Tajdozian H, Barman I, Park HA, Yoon Y, Jo S, Lee S, Shuvo MSH, Bae SH, Lee H, Ju S, Park CE, Kim HK, Han JH, Kim JW, Yoon SG, Kim JH, Choi YG, Lee S, Seo H, Song HY. | Cells | 10.3390/cells13232029 | 2024 | ||
| Biotechnology | Nanobiotechnology Unveils the Power of Probiotics: A Comprehensive Review on the Synergistic Role of Probiotics and Advanced Nanotechnology in Enhancing Geriatric Health. | Kadam O, Dalai S, Chauhan B, Guru RR, Mitra S, Raytekar N, Kumar R. | Cureus | 10.7759/cureus.80478 | 2025 | |
| Metabolism | In Vitro Framework to Assess the Anti-Helicobacter pylori Potential of Lactic Acid Bacteria Secretions as Alternatives to Antibiotics. | Whiteside SA, Mohiuddin MM, Shlimon S, Chahal J, MacPherson CW, Jass J, Tompkins TA, Creuzenet C. | Int J Mol Sci | 10.3390/ijms22115650 | 2021 | |
| Linking human milk oligosaccharide metabolism and early life gut microbiota: bifidobacteria and beyond. | Lordan C, Roche AK, Delsing D, Nauta A, Groeneveld A, MacSharry J, Cotter PD, van Sinderen D. | Microbiol Mol Biol Rev | 10.1128/mmbr.00094-23 | 2024 | ||
| Lactobacillus paracasei-derived extracellular vesicles attenuate the intestinal inflammatory response by augmenting the endoplasmic reticulum stress pathway. | Choi JH, Moon CM, Shin TS, Kim EK, McDowell A, Jo MK, Joo YH, Kim SE, Jung HK, Shim KN, Jung SA, Kim YK. | Exp Mol Med | 10.1038/s12276-019-0359-3 | 2020 | ||
| Metabolism | An Acid Up-Regulated Surface Protein of Lactobacillus paracasei Strain GCRL 46 is Phylogenetically Related to the Secreted Glucan- (GpbB) and Immunoglobulin-Binding (SibA) Protein of Pathogenic Streptococci. | Pepper SJ, Britz ML. | Int J Mol Sci | 10.3390/ijms20071610 | 2019 | |
| Occurrence and genetic diversity of prophage sequences identified in the genomes of L. casei group bacteria. | Jarocki P, Komon-Janczara E, Mlodzinska A, Sadurski J, Kolodzinska K, Laczmanski L, Panek J, Frac M. | Sci Rep | 10.1038/s41598-023-35823-z | 2023 | ||
| Genetics | Genome sequence of Lacticaseibacillus paracasei ORD 0998 (CECT 30660), a probiotic bacterium for women's health. | Rodenes-Gavidia A, Illescas V, Martinez-Blanch J, Chenoll E, Moreno-Munoz JA, Jimenez Lopez J, Lamelas A. | Microbiol Resour Announc | 10.1128/mra.00849-24 | 2025 | |
| Genetics | Genome sequence and evaluation of safety and probiotic potential of Lacticaseibacillus paracasei LC86 and Lacticaseibacillus casei LC89. | Chen T, Zhao Y, Fan Y, Dong Y, Gai Z. | Front Microbiol | 10.3389/fmicb.2024.1501502 | 2024 | |
| Comprehensive Safety Assessment of Lacticaseibacillus paracasei subsp. paracasei NTU 101 Through Integrated Genotypic and Phenotypic Analysis. | Chen CT, Chao WY, Lin CH, Shih TW, Pan TM. | Curr Issues Mol Biol | 10.3390/cimb46110734 | 2024 | ||
| Genetics | Lacticaseibacillus paracasei: Occurrence in the Human Gut Microbiota and K-Mer-Based Assessment of Intraspecies Diversity. | Frolova M, Yudin S, Makarov V, Glazunova O, Alikina O, Markelova N, Kolzhetsov N, Dzhelyadin T, Shcherbakova V, Trubitsyn V, Panyukov V, Zaitsev A, Kiselev S, Shavkunov K, Ozoline O. | Life (Basel) | 10.3390/life11111246 | 2021 | |
| Potential Probiotic Properties of Exopolysaccharide-Producing Lacticaseibacillus paracasei EPS DA-BACS and Prebiotic Activity of Its Exopolysaccharide. | Lee MG, Joeng H, Shin J, Kim S, Lee C, Song Y, Lee BH, Park HG, Lee TH, Jiang HH, Han YS, Lee BG, Lee HJ, Park MJ, Jun YJ, Park YS. | Microorganisms | 10.3390/microorganisms10122431 | 2022 | ||
| Probiotic Properties of Lactic Acid Bacteria Newly Isolated from Algerian Raw Cow's Milk. | Kouadri Boudjelthia N, Belabbas M, Bekenniche N, Monnoye M, Gerard P, Riazi A. | Microorganisms | 10.3390/microorganisms11082091 | 2023 | ||
| Uptake of Levilactobacillus brevis JCM 1059 by THP-1 Cells via Interaction between SlpB and CAP-1 Promotes Cytokine Production. | Yin T, Zhang X, Iwatani S, Miyanaga K, Yamamoto N. | Microorganisms | 10.3390/microorganisms11020247 | 2023 | ||
| Lacticaseibacillus spp.; Probiotic candidates from Palmyra palm sugar possesses antimicrobial and anti-biofilm activities against methicillin-resistant Staphylococcus aureus. | Mitsuwan W, Sornsenee P, Romyasamit C. | Vet World | 10.14202/vetworld.2022.299-308 | 2022 | ||
| Molecular strategies for the utilisation of human milk oligosaccharides by infant gut-associated bacteria. | Kiely LJ, Busca K, Lane JA, van Sinderen D, Hickey RM. | FEMS Microbiol Rev | 10.1093/femsre/fuad056 | 2023 | ||
| Proteome | Valorization of leftover green tea residues through conversion to bioactive peptides using probiotics-aided anaerobic digestion. | Lee JY, Hong H, Lee JE, Hong YJ, Hwang HW, Jin HS, Shim H, Hong YD, Park WS, Chung JO, Lee DW. | Microb Biotechnol | 10.1111/1751-7915.14155 | 2023 | |
| Metabolism | In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases. | Surachat K, Sangket U, Deachamag P, Chotigeat W. | PLoS One | 10.1371/journal.pone.0183548 | 2017 | |
| Genetics | Genome Sequencing of five Lacticaseibacillus Strains and Analysis of Type I and II Toxin-Antitoxin System Distribution. | Levante A, Lazzi C, Vatsellas G, Chatzopoulos D, Dionellis VS, Makrythanasis P, Neviani E, Folli C. | Microorganisms | 10.3390/microorganisms9030648 | 2021 | |
| Metabolism | Evaluation of the Cholesterol-Lowering Mechanism of Enterococcus faecium Strain 132 and Lactobacillus paracasei Strain 201 in Hypercholesterolemia Rats. | Yang L, Xie X, Li Y, Wu L, Fan C, Liang T, Xi Y, Yang S, Li H, Zhang J, Ding Y, Xue L, Chen M, Wang J, Wu Q. | Nutrients | 10.3390/nu13061982 | 2021 | |
| Genetics | Complete Genome Sequencing and Comparative Genomics of Three Potential Probiotic Strains, Lacticaseibacillus casei FBL6, Lacticaseibacillus chiayiensis FBL7, and Lacticaseibacillus zeae FBL8. | Kim E, Yang SM, Kim D, Kim HY. | Front Microbiol | 10.3389/fmicb.2021.794315 | 2021 | |
| Genetics | Visualization of consensus genome structure without using a reference genome. | Tada I, Tanizawa Y, Arita M. | BMC Genomics | 10.1186/s12864-017-3499-7 | 2017 | |
| Genetics | Comparative genomics and functional analysis of a highly adhesive dairy Lactobacillus paracasei subsp. paracasei IBB3423 strain. | Koryszewska-Baginska A, Gawor J, Nowak A, Grynberg M, Aleksandrzak-Piekarczyk T. | Appl Microbiol Biotechnol | 10.1007/s00253-019-10010-1 | 2019 | |
| alpha-Lipoic acid increases phagocytosis of some lactic acid bacteria via modulation of CD36 expression. | Nomura N, Miyadai N, Kawase I. | Biosci Microbiota Food Health | 10.12938/bmfh.2024-019 | 2025 | ||
| Exploring Calcium Alginate-Based Gels for Encapsulation of Lacticaseibacillus paracasei to Enhance Stability in Functional Breadmaking. | Zadeike D, Gaizauskaite Z, Basinskiene L, Zvirdauskiene R, Cizeikiene D. | Gels | 10.3390/gels10100641 | 2024 | ||
| Lacticaseibacillus paracasei completely utilizes fructooligosacchrides in the human gut through beta-fructosidase (FosE). | Jung DH, Kim IY, Kim YJ, Chung WH, Lim MY, Nam YD, Seo DH, Park CS. | World J Microbiol Biotechnol | 10.1007/s11274-024-04068-x | 2024 | ||
| Isolation, structure elucidation, total synthesis, and biosynthesis of dermazolium A, an antibacterial imidazolium metabolite of a vaginal bacterium Dermabacter vaginalis. | Kim HR, Kim J, Yu JS, Lee BS, Kim KH, Kim CS. | Arch Pharm Res | 10.1007/s12272-022-01424-z | 2023 | ||
| Newly isolated Lactobacillus paracasei strain modulates lung immunity and improves the capacity to cope with influenza virus infection. | Kim S, Lee S, Kim TY, Lee SH, Seo SU, Kweon MN. | Microbiome | 10.1186/s40168-023-01687-8 | 2023 | ||
| Reduction in Biogenic Amine Content in Baechu (Napa Cabbage) Kimchi by Biogenic Amine-Degrading Lactic Acid Bacteria. | Lee J, Jin YH, Pawluk AM, Mah JH. | Microorganisms | 10.3390/microorganisms9122570 | 2021 | ||
| Phylogeny | Comparison of 16S rRNA Gene Based Microbial Profiling Using Five Next-Generation Sequencers and Various Primers. | Park C, Kim SB, Choi SH, Kim S | Front Microbiol | 10.3389/fmicb.2021.715500 | 2021 | |
| Phylogeny | Characterization of a bacterial strain Lactobacillus paracasei LP10266 recovered from an endocarditis patient in Shandong, China. | Tang Q, Hao Y, Wang L, Lu C, Li M, Si Z, Wu X, Lu Z | BMC Microbiol | 10.1186/s12866-021-02253-8 | 2021 | |
| Genetics | Whole-genome sequence and comparative genome analysis of Lactobacillus paracasei DTA93, a promising probiotic lactic acid bacterium. | Tarrah A, Pakroo S, Corich V, Giacomini A | Arch Microbiol | 10.1007/s00203-020-01883-2 | 2020 | |
| Phylogeny | In Vitro Evaluation of Probiotic Properties of Lactic Acid Bacteria Isolated from Some Traditionally Fermented Ethiopian Food Products. | Mulaw G, Sisay Tessema T, Muleta D, Tesfaye A | Int J Microbiol | 10.1155/2019/7179514 | 2019 | |
| Enzymology | Probiotic Lactobacillus paracasei A221 improves the functionality and bioavailability of kaempferol-glucoside in kale by its glucosidase activity. | Shimojo Y, Ozawa Y, Toda T, Igami K, Shimizu T | Sci Rep | 10.1038/s41598-018-27532-9 | 2018 | |
| Pathogenicity | Stabilization of freeze-dried Lactobacillus paracasei subsp. paracasei JCM 8130(T) with the addition of disaccharides, polymers, and their mixtures. | Teng D, Kawai K, Mikajiri S, Hagura Y | Biosci Biotechnol Biochem | 10.1080/09168451.2017.1279852 | 2017 | |
| Enzymology | Antibacterial activity of a cell wall hydrolase from Lactobacillus paracasei NRRL B-50314 produced by recombinant Bacillus megaterium. | Liu S, Rich JO, Anderson A | J Ind Microbiol Biotechnol | 10.1007/s10295-014-1557-6 | 2014 | |
| Phylogeny | Isolation and identification of lactic acid bacteria with effect of immune protection to Eschericia coli in mice. | Ishida-Fujii K, Goto S, Kuboki H, Hirano S, Sakamoto M, Sato M | Biofactors | 10.1002/biof.552210131 | 2004 | |
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| Biotechnology | Accelerated production of dry fermented sausage. | Blom H, Hagen BF, Pedersen BO, Holck AL, Axelsson L, Naes H | Meat Sci | 10.1016/0309-1740(96)00068-x | 1996 | |
| Enzymology | Cloning, sequencing and expression of the gene encoding the cell-envelope-associated proteinase from Lactobacillus paracasei subsp. paracasei NCDO 151. | Holck A, Naes H | J Gen Microbiol | 10.1099/00221287-138-7-1353 | 1992 | |
| Enzymology | Purification and N-terminal amino acid sequence determination of the cell-wall-bound proteinase from Lactobacillus paracasei subsp. paracasei. | Naes H, Nissen-Meyer J | J Gen Microbiol | 10.1099/00221287-138-2-313 | 1992 | |
| Biotechnology | Lactobacilli isolated from sugary kefir grains capable of polysaccharide production and minicell formation. | Pidoux M, Marshall VM, Zanoni P, Brooker B | J Appl Bacteriol | 10.1111/j.1365-2672.1990.tb01521.x | 1990 | |
| Phylogeny | Lactobacillus brantae sp. nov., isolated from faeces of Canada geese (Branta canadensis). | Volokhov DV, Amselle M, Beck BJ, Popham DL, Whittaker P, Wang H, Kerrigan E, Chizhikov VE | Int J Syst Evol Microbiol | 10.1099/ijs.0.033852-0 | 2011 |
| #2263 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5622 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34920 | ; Curators of the CIP; |
| #50901 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32212 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121547 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103918 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data