Lacticaseibacillus paracasei subsp. paracasei (DSM 4905, ATCC 11578)

Name: Lacticaseibacillus paracasei subsp. paracasei (DSM 4905, ATCC 11578)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6546

Type strain

Culture col. no. DSM 4905 ATCC 11578

NCBI tax ID(s) 47714

Special Collections DSMZ

History <- ATCC (Lactobacillus casei) <- E.B. Tilden

Links

Lacticaseibacillus paracasei subsp. paracasei DSM 4905 is a bacterium that was isolated from oral cavity.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 35386

ATCC 11578,DSM 4905,BCRC 17005,CCRC 17005

@ref 20215

Last LPSN update 2026-02-09 11:19:15

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lacticaseibacillus

Species Lacticaseibacillus paracasei subsp. paracasei

Full scientific name Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020

Synonyms (1)

Lactobacillus paracasei subsp. paracasei

BacDive ID	Other strains from **Lacticaseibacillus paracasei subsp. paracasei** (19)	Type strain
6548	L. paracasei subsp. paracasei RO94, DSM 5622, ATCC 25302, NCDO 151, CCUG ... (type strain)
6545	L. paracasei subsp. paracasei No. 59, DSM 2649
6549	L. paracasei subsp. paracasei A22/73, DSM 8741, NCFB 2976
6550	L. paracasei subsp. paracasei A112/73, DSM 8742, NCFB 2977
6551	L. paracasei subsp. paracasei 85 E, DSM 20006, JCM 1163, KCTC 3166
6552	L. paracasei subsp. paracasei 40, DSM 20008, ATCC 25598, NCDO 2743, NCIB ...
6553	L. paracasei subsp. paracasei C 17, CCUG 34680, DSM 20020, ATCC 27216, ...
6554	L. paracasei subsp. paracasei 41, DSM 20207, NCDO 1977, JCM 1161
6555	L. paracasei subsp. paracasei S, DSM 20312, ATCC 27092
6556	L. paracasei subsp. paracasei 28, DSM 20244
6557	L. paracasei subsp. paracasei 9664, A 13, BU 240, Ep 300, Epsilon, PBR ...
6659	L. paracasei subsp. paracasei B41, DSM 23505
160021	L. paracasei subsp. paracasei GCRL 163, DSM 111790
160981	L. paracasei subsp. paracasei JCM 1053, IAM 1043
161128	L. paracasei subsp. paracasei JCM 1109
161129	L. paracasei subsp. paracasei JCM 1111
163406	L. paracasei subsp. paracasei JCM 2769
165742	L. paracasei subsp. paracasei JCM 8131, NCFB 205, NCIMB 2378, NCTC 2378
165743	L. paracasei subsp. paracasei JCM 8133, NCDO 1202

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		92
125438		90.941	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1871	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
1871	positive	growth	37

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	+	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	+	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
1871	-	-	-	-	-	+	-	-	-	-	+	+	+	+	-	-	-	-	+	+	-	-	+	-	+	+	+	-	-	+	-	+	+	+	+	-	-	-	-	-	+	-	+	-	-	-	+	-	-	-
1871	-	-	-	-	-	+	-	-	-	-	+	+	+	+	-	-	-	-	+	+	-	+/-	+	+/-	+	+	+	+	+	+	-	+	+	+	+	-	-	-	-	-	+	+	+	-	-	-	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host Body-Site	#Oral cavity and airways

Isolation

1871

Sample typeoral cavity

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
1871	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2887831v1 assembly for Lacticaseibacillus paracasei DSM 4905	scaffold	GCA_028878315	1597.1262	1597	63.78

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lacticaseibacillus paracasei DSM 4905
NCBI: GCA_028878315.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.94	no
125438	anaerobic	anaerobicⓘ	no	87.25	no
125438	aerobic	aerobicⓘ	no	91.44	no
125438	spore-forming	spore-formingⓘ	no	80.13	no
125438	thermophilic	thermophileⓘ	no	94.00	yes
125438	flagellated	motile2+ⓘ	no	92.00	no

Literature

Title	Authors	Journal	DOI	Year
Draft genome sequences of 14 Lacticaseibacillus spp. strains, representatives of a collection of 200 strains.	Colautti A, Rossi N, Piazza C, Comi G, Iacumin L.	Microbiol Resour Announc	10.1128/mra.00485-23	2023
Probiotic Lactobacillus Species Modulate Immune Responses During Vaginal Epithelial Cell Colonization.	Valentine M, Rosati D, Dietschmann A, Schille TB, Netea MG, Hube B, Gresnigt MS.	J Infect Dis	10.1093/infdis/jiaf221	2025
Investigation of Antibacterial Activity and Probiotic Properties of Strains Belonging to Lactobacillus and Bifidobacterium Genera for Their Potential Application in Functional Food and Feed Products.	Cizeikiene D, Jagelaviciute J	Probiotics Antimicrob Proteins	10.1007/s12602-021-09777-5	2021

References

#1871	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4905
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lacticaseibacillus paracasei subsp. paracasei (DSM 4905, ATCC 11578)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Metabolite utilization

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_028878315

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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