Lactiplantibacillus plantarum subsp. plantarum (DSM 20246, ATCC 10012, NCDO 352)

Name: Lactiplantibacillus plantarum subsp. plantarum (DSM 20246, ATCC 10012, NCDO 352)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6500

Type strain

Culture col. no. DSM 20246 ATCC 10012 NCDO 352 NCIB 8016 NCIMB 8016 5 more

NCBI tax ID(s) 337330

Special Collections DSMZ JCM KCTC

Links

Lactiplantibacillus plantarum subsp. plantarum DSM 20246 is a mesophilic prokaryote of the family Lactobacillaceae.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 12053

LMG 18399,ATCC 10012,NCFB 352,NCIB 8016,NCDO 352,DSM 20246,JCM 1055,CCRC 14059,NCIMB 8016,JCM 1550,KCTC 3105,BCRC 14059,NCIM 2372

@ref 20215

Last LPSN update 2025-12-16 09:48:20

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactiplantibacillus

Species Lactiplantibacillus plantarum subsp. plantarum

Full scientific name Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020

Synonyms (1)

Lactobacillus plantarum subsp. plantarum

BacDive ID	Other strains from Lactiplantibacillus plantarum subsp. plantarum (27)	Type strain
6629	L. plantarum subsp. plantarum Lp 39, No. 39, DSM 20174, ATCC 14917, NCDO ... (type strain)
6493	L. plantarum subsp. plantarum P1, DSM 2601, ATCC 10241, NCDO 343, NCIB ...
6494	L. plantarum subsp. plantarum No. 3, DSM 2648
6495	L. plantarum subsp. plantarum 20E1 (224 CECT), 20-E-1, DSM 6872
6496	L. plantarum subsp. plantarum ITQB M 32 A, DSM 10492
6497	L. plantarum subsp. plantarum BBII9, DSM 12028
6498	L. plantarum subsp. plantarum DSM 13273, ATCC BAA-171, NRRL B-14768, CCUG ...
6499	L. plantarum subsp. plantarum 17-5, DSM 20205, ATCC 8014, CCM 1904, NCDO ...
6501	L. plantarum subsp. plantarum 8, DSM 24624, CIAT S 66.7
24124	L. plantarum subsp. plantarum DSM 1055, NRRL B-5461
130964	L. plantarum subsp. plantarum Enolab 4606, J16, DSM 100813
139740	L. plantarum subsp. plantarum 92702 57/5, DSM 8428
139741	L. plantarum subsp. plantarum 92702 54/6, DSM 8427
139742	L. plantarum subsp. plantarum T30PCM38, DSM 28393
161410	L. plantarum subsp. plantarum JCM 13898
161411	L. plantarum subsp. plantarum JCM 13899
162190	L. plantarum subsp. plantarum JCM 18188
162191	L. plantarum subsp. plantarum JCM 18189
165787	L. plantarum subsp. plantarum JCM 8341, TISTR 844
165788	L. plantarum subsp. plantarum JCM 8342, NRIC 1829, TISTR 850
165789	L. plantarum subsp. plantarum JCM 8343
165790	L. plantarum subsp. plantarum JCM 8344, NRIC 1832, TISTR 861
165791	L. plantarum subsp. plantarum JCM 8345, TISTR 863
165792	L. plantarum subsp. plantarum JCM 8346, TISTR 862
165793	L. plantarum subsp. plantarum JCM 8347, NRIC 1837, TISTR 864
165794	L. plantarum subsp. plantarum JCM 8348, NRIC 1838, TISTR 926
174482	L. plantarum subsp. plantarum HUN088, AG30, DSM 115560

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	93.043
125439	positive	91.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8657	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8657	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	91.7

Murein

@ref	Murein short key	Type
8657	A31	A1gamma m-Dpm-direct

Observation

67770

ObservationAssay of p-Aminobenzoic acid

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
8657	-	-	-	-	+	+	-	-	-	-	+	+	+	+	-	-	-	-	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	+	+	+	+	+	+	+	+	-	-
8657	-	-	-	-	+	+	-	-	-	-	+	+	+	+	-	-	-	-	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
8657	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM188866v1 assembly for Lactiplantibacillus plantarum DSM 20246	contig	GCA_001888665	1590.346	2957636619	1590	67.68

Genome browser: GCA_001888665

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Lactobacillus plantarum subsp. plantarum gene for 16S rRNA, partial sequence, strain: JCM 1055.	AB289251	625		337330
124043	Lactobacillus plantarum subsp. plantarum gene for 16S rRNA, partial sequence, strain: JCM 1550.	AB289254	616		337330

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Lactiplantibacillus plantarum DSM 20246
NCBI: GCA_001888665

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	63.00	no
125439	motility	BacteriaNetⓘ	no	64.10	no
125439	gram_stain	BacteriaNetⓘ	positive	91.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	91.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus plantarum strain DSM 20246
PATRIC: 1590.346

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.04	no
125438	anaerobic	anaerobicⓘ	no	87.91	no
125438	spore-forming	spore-formingⓘ	no	79.55	no
125438	aerobic	aerobicⓘ	no	96.53	no
125438	thermophilic	thermophileⓘ	no	97.00	no
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Lactiplantibacillus plantarum LRCC5314 includes a gene for serotonin biosynthesis via the tryptophan metabolic pathway.	Jeong J, Lee Y, Yoon S, Kim JH, Kim W.	J Microbiol	10.1007/s12275-021-1472-2	2021
	Targeted Assay Engineering Enhances Bile Salt Hydrolase Activity in Heyndrickxia coagulans ATCC 7050 and Lactiplantibacillus plantarum ATCC 10012.	Nair PP, Annapure US.	Curr Microbiol	10.1007/s00284-024-04028-6	2025
Cultivation	Fermentation dynamics of bile salt hydrolase production in Heyndrickxia coagulans ATCC 7050 and Lactiplantibacillus plantarum ATCC 10012: Addressing ninhydrin assay limitations with a novel HPTLC-MS method.	Nair PP, Annapure US.	J Microbiol Methods	10.1016/j.mimet.2024.107050	2024
Genetics	The mutL Gene as a Genome-Wide Taxonomic Marker for High Resolution Discrimination of Lactiplantibacillus plantarum and Its Closely Related Taxa.	Huang CH, Chen CC, Lin YC, Chen CH, Lee AY, Liou JS, Gu CT, Huang L.	Microorganisms	10.3390/microorganisms9081570	2021
	The strategic role of biotics in dental caries prevention: A scoping review.	Banakar M, Fernandes GVO, Etemad-Moghadam S, Frankenberger R, Pourhajibagher M, Mehran M, Yazdi MH, Haghgoo R, Alaeddini M.	Food Sci Nutr	10.1002/fsn3.4473	2024
Metabolism	In Vitro Framework to Assess the Anti-Helicobacter pylori Potential of Lactic Acid Bacteria Secretions as Alternatives to Antibiotics.	Whiteside SA, Mohiuddin MM, Shlimon S, Chahal J, MacPherson CW, Jass J, Tompkins TA, Creuzenet C.	Int J Mol Sci	10.3390/ijms22115650	2021
	Binding and Detoxification of Insecticides by Potentially Probiotic Lactic Acid Bacteria Isolated from Honeybee (Apis mellifera L.) Environment-An In Vitro Study.	Leska A, Nowak A, Miskiewicz K, Rosicka-Kaczmarek J.	Cells	10.3390/cells11233743	2022
	Biosynthesis of Gamma-Aminobutyric Acid (GABA) by Lactiplantibacillus plantarum in Fermented Food Production.	Iorizzo M, Paventi G, Di Martino C.	Curr Issues Mol Biol	10.3390/cimb46010015	2023

References

#8657	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20246
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Lactiplantibacillus plantarum subsp. plantarum (DSM 20246, ATCC 10012, NCDO 352)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Murein

Observation

Metabolite utilization

API 50CHac

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001888665

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media