Lactiplantibacillus plantarum DSM 13273 is an anaerobe, mesophilic, Gram-positive prokaryote that was isolated from jojoba meal fermentation.
Gram-positive rod-shaped anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Lactiplantibacillus |
| Species Lactiplantibacillus plantarum |
| Full scientific name Lactiplantibacillus plantarum (Orla-Jensen 1919) Zheng et al. 2020 |
| Synonyms (3) |
| BacDive ID | Other strains from Lactiplantibacillus plantarum (3) | Type strain |
|---|---|---|
| 162759 | L. plantarum JCM 20110, IAM 10072, IAM 1216 | |
| 162785 | L. plantarum JCM 20148, IAM 1318 | |
| 164111 | L. plantarum JCM 31650 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 4986 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 38642 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 121861 | CIP Medium 40 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | + | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | + | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | + | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 121861 | 17632 ChEBI | nitrate | - | reduction | |
| 121861 | 17632 ChEBI | nitrate | + | respiration | |
| 121861 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 121861 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 121861 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | + | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 121861 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 121861 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121861 | ornithine decarboxylase | - | 4.1.1.17 | |
| 121861 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 121861 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4986 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | + | - | - | - | + | + | + | - | + | + | + | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | + | - | - | - | - | - | - | +/- | - | - | |
| 4986 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | + | + | - | - | + | + | + | - | + | + | + | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | + | - | - | - | - | - | - | + | - | - | |
| 4986 | - | - | - | - | + | + | - | - | - | - | + | + | + | + | + | +/- | - | - | + | + | + | - | + | + | + | +/- | + | + | + | + | + | + | + | - | + | + | - | - | - | + | + | - | - | - | - | +/- | - | + | - | - | |
| 121861 | not determinedn.d. | - | - | - | + | + | - | - | - | - | + | + | + | + | + | +/- | - | +/- | + | + | +/- | + | + | + | + | + | + | + | + | + | + | + | + | - | + | +/- | - | - | - | + | + | - | + | - | - | - | - | + | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM143685v1 assembly for Lactiplantibacillus plantarum DSM 13273 | scaffold | 1590 | 53.8 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lactobacillus arizonensis partial 16S rRNA gene, strain NRRL B-14768 | AJ965482 | 1474 | 1590 | ||
| 20218 | Lactobacillus arizonensis partial 16S rRNA gene, strain DSM 13273 | AJ965487 | 1400 | 1590 | ||
| 4986 | Lactobacillus arizonensis 16S ribosomal RNA gene, partial sequence | AF093757 | 1423 | 1590 | ||
| 124043 | Lactobacillus plantarum gene for 16S rRNA, partial sequence, strain: JCM 11125. | AB289250 | 621 | 1590 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 86.20 | no |
| 125439 | motility | BacteriaNetⓘ | no | 77.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 95.10 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 96.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 92.71 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 86.74 | no |
| 125438 | aerobic | aerobicⓘ | no | 96.51 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 79.81 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.47 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.00 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| Evaluation of probiotic potential, safety assessment and whole genome sequencing of Lactiplantibacillus plantarum strain MOVIN isolated from toddy sample. | Vijayaganapathi A, Mohanasrinivasan V. | Front Microbiol | 10.3389/fmicb.2025.1625659 | 2025 | |
| Genome sequence data of Lactiplantibacillus plantarum IMI 507028. | Nikodinoska I, Makkonen J, Blande D, Moran C. | Data Brief | 10.1016/j.dib.2022.108190 | 2022 | |
| Probiogenomic In-Silico Analysis and Safety Assessment of Lactiplantibacillus plantarum DJF10 Strain Isolated from Korean Raw Milk. | Kandasamy S, Yoo J, Yun J, Lee KH, Kang HB, Kim JE, Oh MH, Ham JS. | Int J Mol Sci | 10.3390/ijms232214494 | 2022 | |
| Molecular Identification and Selection of Probiotic Strains Able to Reduce the Serum TMAO Level in Mice Challenged with Choline. | Ramireddy L, Tsen HY, Chiang YC, Hung CY, Wu SR, Young SL, Lin JS, Huang CH, Chiu SH, Chen CC, Chen CC. | Foods | 10.3390/foods10122931 | 2021 | |
| Lactococcus lactis Strain Plasma Uniquely Induces IFN-alpha Production via Plasmacytoid Dendritic Cell Activation: A Comparative Study of Postbiotic Products. | Fujimura S, Kawamura M, Tamura Y. | Microorganisms | 10.3390/microorganisms13102261 | 2025 | |
| Purification, characterization and probiotic proliferation effect of exopolysaccharides produced by Lactiplantibacillus plantarum HDC-01 isolated from sauerkraut. | Yu L, Ye G, Qi X, Yang Y, Zhou B, Zhang Y, Du R, Ge J, Ping W. | Front Microbiol | 10.3389/fmicb.2023.1210302 | 2023 | |
| Hymenolepis diminuta Reduce Lactic Acid Bacterial Load and Induce Dysbiosis in the Early Infection of the Probiotic Colonization of Swiss Albino Rat. | Mandal S, Mondal C, Mukherjee T, Saha S, Kundu A, Ghosh S, Lyndem LM. | Microorganisms | 10.3390/microorganisms10122328 | 2022 | |
| Assessing the viability of three Lactobacillus bacterial species protected in the cryoprotectants containing whey and maltodextrin during freeze-drying process. | Majidzadeh Heravi R, Ghiasvand M, Rezaei E, Kargar F | Lett Appl Microbiol | 10.1111/lam.13631 | 2021 | |
| Assessment of the in vitro antimicrobial activity of Lactobacillus species for identifying new potential antibiotics. | Dubourg G, Elsawi Z, Raoult D | Int J Antimicrob Agents | 10.1016/j.ijantimicag.2015.05.011 | 2015 | |
| Lactobacillus arizonensis sp. nov., isolated from jojoba meal. | Swezey JL, Nakamura LK, Abbott TP, Peterson RE | Int J Syst Evol Microbiol | 10.1099/00207713-50-5-1803 | 2000 |
| #4986 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13273 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #38642 | ; Curators of the CIP; |
| #56759 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45396 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #121861 | Collection of Institut Pasteur ; Curators of the CIP; CIP 106786 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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