[Ref.: #8934] |
Sample type/isolated from |
eye |
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[Ref.: #50243] |
Sample type/isolated from |
Eye |
|
[Ref.: #67770] |
Sample type/isolated from |
Eye |
|
[Ref.: #118786] |
Sample type/isolated from |
Human, Eye, conjunctiva |
* marker position based on {}
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Isolation sources categories |
#Host Body-Site |
#Organ |
#Eye |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Lactobacillus crispatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1185 |
LC065039 |
1464 |
|
1423736 tax ID |
[Ref.: #124043] |
Lactobacillus crispatus DSM 20584 gene for 16S rRNA, partial sequence. |
LC752457 |
588 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus 16S-23S rRNA intergenic spacer region |
AF074857 |
203 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus 16S ribosomal RNA gene, partial sequence |
AF133265 |
485 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus strain ATCC33820 16S ribosomal RNA gene, partial sequence |
AF257097 |
1518 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus partial 16S rRNA gene, type strain DSM 20584T |
FR683088 |
1516 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus strain DSM 20584 16S ribosomal RNA gene, partial sequence |
EF468095 |
391 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus strain DSM 20584 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence |
EU161625 |
793 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus 16S rRNA gene |
Y17362 |
1559 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus gene for 16S rRNA, partial sequence, strain: YIT 0212 (= JCM 1185) |
AB008206 |
1556 |
|
47770 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus gene for 16S rRNA, partial sequence, strain: JCM 1185 |
AB289067 |
694 |
|
1423736 tax ID |
* |
[Ref.: #20218] |
Lactobacillus crispatus 16S ribosomal RNA, partial sequence; 16S/23S intergenic spacer region, complete sequence; and 23S ribosomal RNA partial sequence |
AF182719 |
662 |
|
1423736 tax ID |
* |
|
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Availability in culture collections External links
[Ref.: #8934] |
Culture collection no. |
DSM 20584, ATCC 33820, CCUG 30722, JCM 1185, LMG 9479, CIP 102990, VPI 3199, BCRC 14618, CECT 4840, NCFB 2752, NRIC 1717, NCDO 2752 |
[Ref.: #75916] |
SI-ID 3273
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Pathogenicity |
Engineering of Vaginal Lactobacilli to Express Fluorescent Proteins Enables the Analysis of Their Mixture in Nanofibers. |
Stojanov S, Plavec TV, Kristl J, Zupancic S, Berlec A |
Int J Mol Sci |
10.3390/ijms222413631 |
2021 |
* |
Genetics |
Complete Genome Sequence of Lactobacillus crispatus Type Strain ATCC 33820. |
Teodori L, Colombini L, Cuppone AM, Lazzeri E, Pinzauti D, Santoro F, Iannelli F, Pozzi G |
Microbiol Resour Announc |
10.1128/MRA.00634-21 |
2021 |
* |
Metabolism |
Differential cytokine and metabolite production by cervicovaginal epithelial cells infected with Lactobacillus crispatus and Ureaplasma urealyticum. |
Cavanagh M, Amabebe E, Anumba DOC |
Anaerobe |
10.1016/j.anaerobe.2019.102101 |
2019 |
* |
Metabolism |
Lactobacillus crispatus modulates epithelial cell defense against Candida albicans through Toll-like receptors 2 and 4, interleukin 8 and human beta-defensins 2 and 3. |
Rizzo A, Losacco A, Carratelli CR |
Immunol Lett |
10.1016/j.imlet.2013.08.013 |
2013 |
* |
Phylogeny |
Characterization and electrotransformation of Lactobacillus crispatus isolated from chicken crop and intestine. |
Beasley SS, Takala TM, Reunanen J, Apajalahti J, Saris PE |
Poult Sci |
10.1093/ps/83.1.45 |
2004 |
* |
Pathogenicity |
Isolation and characterization of beta-galactosidase from Lactobacillus crispatus. |
Kim JW, Rajagopal SN |
Folia Microbiol (Praha) |
10.1007/BF02817446 |
2000 |
* |
|
Characterization of lactic acid bacteria isolated from the poultry intestinal environment with anti-Salmonella activity in vitro. |
Hidalgo VM, Babot JD, Fernandez MM, Perez Chaia A, Audisio C, Apella MC |
Braz J Microbiol |
10.1007/s42770-022-00860-9 |
2022 |
* |
|
- References
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#8934 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20584
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#40499 |
; Curators of the CIP;
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#50243 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 30722
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68371 |
Automatically annotated from API 50CH acid .
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#68382 |
Automatically annotated from API zym .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#75916 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID3273.1 )
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#118786 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 102990
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#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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