Pediococcus acidilactici (DSM 20284, KCTC 13734, LMG 11384)

Name: Pediococcus acidilactici (DSM 20284, KCTC 13734, LMG 11384)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6381

Type strain

Strain Designation B213c, B213 c. Barley

Culture col. no. DSM 20284 KCTC 13734 LMG 11384 CCUG 32235 NCIMB 12174 10 more

NCBI tax ID(s) 862514 1254

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- W. Back, B213c JCM <-- NRIC 0115 <-- DSM 20284 <-- W. Back B213c. CIP <- 1990, DSM <- W. Back: strain B213 c. Barley

Links

Pediococcus acidilactici B213c is an anaerobe, Gram-positive, coccus-shaped bacterium that was isolated from barley.

Gram-positive coccus-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 297036

LMG 11384,CCUG 32235,CIP 103408,NCFB 2767,NCIMB 12174,KCTC 13734,JCM 8797,KCTC 3771,CECT 5765,CECT 5929,BCC 4303,NRRL B-14958,BCRC 17599,CCRC 17599,CGMCC 1.2696,CGMCC 1.2434,VTT E-93493,DSM 20284

@ref 20215

Last LPSN update 2026-05-29 08:26:23

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Pediococcus

Species Pediococcus acidilactici

Full scientific name Pediococcus acidilactici Lindner 1887 (Approved Lists 1980)

Synonyms (1)

Pediococcus lolii

BacDive ID	Other strains from **Pediococcus acidilactici** (29)	Type strain
6379	P. acidilactici DSM 19927, JCM 15055, LMG 27029, NGRI 0510Q, ...
6380	P. acidilactici P-60, DSM 20238, ATCC 8042, CCM 2425, NCDO ...
137862	P. acidilactici 906-85, CIP 101954
137940	P. acidilactici CIP 102243
137969	P. acidilactici CIP 102334
139767	P. acidilactici 7/4A, 7_4, DSM 25404
141184	P. acidilactici CCUG 35
144734	P. acidilactici CCUG 26412
145344	P. acidilactici CCUG 28233
145422	P. acidilactici CCUG 28437, CCM 2482, ATCC 25743
146139	P. acidilactici CCUG 30439
147105	P. acidilactici CCUG 32870
150103	P. acidilactici CCUG 38997
151898	P. acidilactici CCUG 45146
152315	P. acidilactici CCUG 46409
153422	P. acidilactici CCUG 49523
155338	P. acidilactici CCUG 57368
155826	P. acidilactici CCUG 59409
162780	P. acidilactici JCM 2014
162858	P. acidilactici JCM 20303, IAM 10061
162874	P. acidilactici JCM 2032, TISTR 424
162927	P. acidilactici JCM 20445, IAM 12283, IFO 3888, NBRC 3888, ...
162931	P. acidilactici JCM 20451, IAM 12292
162934	P. acidilactici JCM 20454, IAM 12295, NCDO 991
162935	P. acidilactici JCM 20456, IAM 12297, NISL 7114
162941	P. acidilactici JCM 20463, IAM 12304
170952	P. acidilactici CRBIP24.174
174542	P. acidilactici 114637, DSM 114637
174543	P. acidilactici AGR20, DSM 117464

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
115999	positive	coccus-shaped
125438			91
125438	positive		93.082

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8690	MRS MEDIUM (DSMZ Medium 11)	Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
39737	MEDIUM 41- for Lactobacillus, Leuconostoc, Weissella, Pediococcus, Sporolactobacillus inulinus		Distilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g)
115999	CIP Medium 41	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8690	positive	growth	30
39737	positive	growth	37
50918	positive	growth	30-37
67770	positive	growth	30
115999	positive	growth	25-45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
50918	anaerobe
50918	microaerophile
125439	facultative anaerobe	94.678

Spore formation

@ref	Spore formation	Confidence
125438		92.328

Murein

@ref	Murein short key	Type
8690	A11.31	A4alpha L-Lys-D-Asp

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
115999	17632 ChEBI	nitrate	-	reduction
115999	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
115999	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
115999	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
115999	amylase	-
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
115999	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
115999	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
115999	ornithine decarboxylase	-	4.1.1.17
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

50918

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	39.5	17.824
C16:0	34.3	16
C18:2 ω6,9c/C18:0 ANTE	9.2	17.724
C19:0 CYCLO ω9c	6.2	18.87
C16:1 ω7c/C15:0 ISO 2OH	4.3	15.85
C18:0	4	18
C18:1 ω9c	2.4	17.769

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
115999	-	-	-	-	-	+	-	-	-	-	+	+	-	+	-	-	+	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
8690	-	-	-	-	+	+	+	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	+	+	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-
8690	-	-	-	-	+	+	+	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	+	+	+	+	-	-	-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-
8690	-	-	-	-	+	+	+	-	-	-	+	+	+	+	-	+	-	-	-	-	-	-	+	-	+	+	+	+	-	-	-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	+/-	-	-
115999	not determinedn.d.	-	-	-	+	+	+	-	-	-	+	+	+	+	-	+/-	-	-	-	-	-	-	+	+	+	+	+	+	-	+/-	-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type
8690	barley
50918	Barley

Taxonmaps

69479

Global distribution of 16S sequence LC097074 (>99% sequence identity) for Pediococcus acidilactici from Microbeatlas

Aquatic Samples	1242
Soil Samples	1156
Animal Samples	16677
Plant Samples	934
Total Samples	20009

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
8690	yes, in single cases	1	Risk group (German classification) According to TRBA 466
115999		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1672676v1 assembly for Pediococcus acidilactici FDAARGOS_1133	complete	GCA_016726765	1254.398		1254	97.64
67770	ASM1239651v1 assembly for Pediococcus acidilactici CCUG 32235	contig	GCA_012396515	1254.351	8115771910	1254	77.05
66792	ASM14632v1 assembly for Pediococcus acidilactici DSM 20284	scaffold	GCA_000146325	862514.3	649989981	862514	76.42
66792	ASM2982333v1 assembly for Pediococcus acidilactici NCFB2767	contig	GCA_029823335	1254.742		1254	75.7
66792	ASM1465125v1 assembly for Pediococcus acidilactici JCM 8797	contig	GCA_014651255	1254.384		1254	74.84

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pediococcus acidilactici partial 16S rRNA gene, strain DSMZ 20284	AJ249535	530	862514
20218	Pediococcus acidilactici 16S ribosomal RNA	M58833	1526	1254
8690	Pediococcus acidilactici 16S rRNA gene, strain DSM 20284 (T)	AJ305320	1569	862514
67770	Pediococcus acidilactici gene for 16S ribosomal RNA, partial sequence, strain: JCM 8797	LC097074	1516	1254
124043	Pediococcus acidilactici strain JCM 8797 16S ribosomal RNA gene, partial sequence.	MT760653	1347	1254

GC content

8690

GC-content (mol%)42.8

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1672676v1 assembly for Pediococcus acidilactici FDAARGOS_1133
BV-BRC: 1254.398

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.68	no
125439	gram_stain	BacteriaNetⓘ	variable	64.63	no
125439	motility	BacteriaNetⓘ	yes	76.18	no
125439	spore_formation	BacteriaNetⓘ	yes	70.57	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pediococcus acidilactici strain FDAARGOS_1133 strain Not applicable
PATRIC: 1254.398

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.08	no
125438	anaerobic	anaerobicⓘ	no	86.34	no
125438	spore-forming	spore-formingⓘ	no	92.33	no
125438	aerobic	aerobicⓘ	no	96.98	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Screening of Antibiotic-Sensitive Lactic Acid Bacteria (LAB) Associated with the Gut of Penaeus Vannamei and its Application in Shrimp Farming.	Gu Y, Lin X, Lu Y, Fang S, Hu K, Ju X, Li L, Chen Z.	Curr Microbiol	10.1007/s00284-025-04396-7	2025
	Molecular Characterization of Culturable Yeasts and Nonspore-Forming Bacteria Associated With Fermented Kapok Seeds (Kantong), a Traditional Food Condiment in Ghana.	Ametefe EN, Thorsen L, Danwonno H, Agoha RK, Glover RLK, Dzogbefia VP, Jespersen L.	Int J Food Sci	10.1155/ijfo/6452183	2025
	Efficacy of a feed additive consisting of Enterococcus faeciumDSM 33761, Pediococcus acidilacticiDSM 33758, Bifidobacterium animalisDSM 16284, Limosilactobacillus reuteriDSM 33751, Ligilactobacillus salivariusDSM 16351 (Biomin® C5) as a zootechnical additive for poultry for fattening and reared for laying/breeding (Biomin GmbH).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Dierick N, Anguita M, Innocenti ML, Ortuno J.	EFSA J	10.2903/j.efsa.2025.9459	2025
	Investigation of Bacteriocin Production Ability of Pediococcus acidilactici JM01 and Probiotic Properties Isolated From Tarak, a Conventional Korean Fermented Milk.	Ahn H, Lee HJ.	Food Sci Nutr	10.1002/fsn3.71003	2025
	Purification and Characterization of Enterocins A, B, and a Novel High-Mass Bacteriocin from Enterococcus lactis-67 with Antilisterial Activity.	Hernandez-Mendoza E, Martinez-Tellez MA, Gonzalez-Rios H, Aispuro-Hernandez E, Paredes-Aguilar MC, Rubi-Soberanes A, Pena-Ramos EA.	Antibiotics (Basel)	10.3390/antibiotics14090903	2025
Pathogenicity	Safety, Antagonistic Activity, and Probiotic Properties of Lactic Acid Bacteria Isolated from Jeotgal, Korean Fermented Seafoods.	Baek J, Kim BS, Kim Y, Bai J.	J Microbiol Biotechnol	10.4014/jmb.2411.11055	2024
	Pediococcus acidilactici isolated from traditional cheese as a potential probiotic with cytotoxic activity against doxorubicin-resistant MCF-7 cells.	Khaleghi M, Khorrami S, Jafari-Nasab T.	3 Biotech	10.1007/s13205-023-03597-w	2023
	Antimicrobial activity of cell-free supernatant of lactic acid bacteria on spoilage bacteria of vacuum-packed sliced emulsion-type sausages.	Tajbakhsh S, Eskandari MH, Shekarforoush SS.	Iran J Vet Res	10.22099/ijvr.2024.49361.7255	2024
	Development of a Multienzyme Cascade for Salvianolic Acid A Synthesis from l-Tyrosine.	Zhang M, Zhong J, Zhang Y, Wang W, Zhao W, Hu S, Lv C, Huang J, Mei L.	ACS Omega	10.1021/acsomega.4c09986	2025
	The aminotransferase Aat initiates 3-phenyllactic acid biosynthesis in Pediococcus acidilactici.	Wenger A, Bar C, Portmann R, Schmidt RS, Eugster E, Weisskopf L, Irmler S.	Front Microbiol	10.3389/fmicb.2023.1150425	2023
	Biological Selenite Reduction, Characterization and Bioactivities of Selenium Nanoparticles Biosynthesised by Pediococcus acidilactici DSM20284.	Wang Q, Wang C, Kuang S, Wang D, Shi Y.	Molecules	10.3390/molecules28093793	2023
	Milk Fermented with Pediococcus acidilactici Strain BE Improves High Blood Glucose Levels and Pancreatic Beta-Cell Function in Diabetic Rats.	Widodo W, Kusumaningrum HRP, Wihadmadyatami H, Wicaksana AL.	Food Sci Anim Resour	10.5851/kosfa.2022.e69	2023
	Production of Salvianic Acid A from l-DOPA via Biocatalytic Cascade Reactions.	Hu KS, Chen CL, Ding HR, Wang TY, Zhu Q, Zhou YC, Chen JM, Mei JQ, Hu S, Huang J, Zhao WR, Mei LH.	Molecules	10.3390/molecules27186088	2022
	Safety and efficacy of a feed additive consisting of Enterococcus faecium DSM 33761, Pediococcus acidilactici DSM 33758, Bifidobacterium animalis DSM 16284, Limosilactobacillus reuteri DSM 33751 and Ligilactobacillus salivarius DSM 16351 (Biomin® C5) for chickens for fattening, chickens reared for laying, turkeys for fattening, turkeys reared for breeding and minor poultry species for fattening and reared for laying/breeding (Biomin GmbH).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Villa RE, Woutersen R, Ortuno Casanova J, Pettenati E.	EFSA J	10.2903/j.efsa.2023.8354	2023
	Assessment of the feed additive consisting of Pediococcus acidilactici DSM 16243 for all animal species for the renewal of its authorisation (Lactosan GmbH & Co.KG).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Fasmon Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Woutersen R, Saarela M, Brozzi R, Galobart J, Revez J, Gregoretti L.	EFSA J	10.2903/j.efsa.2021.6697	2021
	Effect of microbial inoculation and storage length on the fermentation profile and nutritive value of high-moisture corn ensiled at 2 different dry matter concentrations.	Saylor BA, Heinzen C, Diepersloot EC, Ferraretto LF.	J Anim Sci	10.1093/jas/skac254	2022
Metabolism	Evaluation of antibacterial properties of lactic acid bacteria from traditionally and industrially produced fermented sausages from Germany.	Bungenstock L, Abdulmawjood A, Reich F.	PLoS One	10.1371/journal.pone.0230345	2020
Pathogenicity	Anti-Tuberculosis Activity of Pediococcus acidilactici Isolated from Young Radish Kimchi against Mycobacterium tuberculosis.	Yoon Y, Seo H, Kim S, Lee Y, Rahim MA, Lee S, Song HY.	J Microbiol Biotechnol	10.4014/jmb.2107.07044	2021
	Evaluation of Quality Parameters in Canned Pork Enriched with 1% Freeze-Dried Cell-Free Supernatant of Lacticaseibacillus paracasei B1 and Reduced Sodium Nitrite Content.	Keska P, Kacaniova M, Stadnik J, Wojciak K, Zielinska D.	Foods	10.3390/foods14173080	2025
Metabolism	Melanin Bleaching and Melanogenesis Inhibition Effects of Pediococcus acidilactici PMC48 Isolated from Korean Perilla Leaf Kimchi.	Kim S, Seo H, Mahmud HA, Islam MI, Sultana OF, Lee Y, Kim M, Song HY.	J Microbiol Biotechnol	10.4014/jmb.2003.03007	2020
Pathogenicity	Inactivation kinetics of beer spoilage bacteria (Lactobacillus brevis, Lactobacillus casei, and Pediococcus damnosus) during acid washing of brewing yeast.	Munford ARG, Chaves RD, Sant'Ana AS.	Food Microbiol	10.1016/j.fm.2020.103513	2020
Phylogeny	Phenotypic and Genotypic Identification of Bacteria Isolated From Traditionally Prepared Dry Starters of the Eastern Himalayas.	Pradhan P, Tamang JP.	Front Microbiol	10.3389/fmicb.2019.02526	2019
	Valorization of Xylose-Rich Medium from Cynara cardunculus Stalks for Lactic Acid Production via Microbial Fermentation.	Russo G, Gelosia M, Fabbrizi G, Angrisano M, Policastro G, Cavalaglio G.	Polymers (Basel)	10.3390/polym16243577	2024
	Genome sequencing of Pediococcus acidilactici (NRCC1), a novel isolate from dromedary camel (Camelus dromedarius) rumen fluid	Ranjan R, Pandit R, Duggirala S, Joshi C, Sharma S, Patil N.	Ann Microbiol		2018
	Amplicon-based sequencing and co-occurence network analysis reveals notable differences of microbial community structure in healthy and dandruff scalps.	Wang L, Yu T, Zhu Y, Luo Y, Dong F, Lin X, Zhao W, He Z, Hu S, Dong Z.	BMC Genomics	10.1186/s12864-022-08534-4	2022
Genetics	Genomic Insight into Pediococcus acidilactici HN9, a Potential Probiotic Strain Isolated from the Traditional Thai-Style Fermented Beef Nhang.	Surachat K, Kantachote D, Deachamag P, Wonglapsuwan M.	Microorganisms	10.3390/microorganisms9010050	2020
	Assessment of the feed additive consisting of Pediococcus pentosaceus DSM 14021 for all animal species for the renewal of its authorisation (Chr. Hansen A/S).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Durjava M, Dusemund B, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Villa RE, Woutersen R, Anguita M, Bozzi Cionci N, Brozzi R, Innocenti ML, Garcia-Cazorla Y.	EFSA J	10.2903/j.efsa.2024.8706	2024
Pathogenicity	Single, Subsequent, or Simultaneous Treatments to Mitigate Mycotoxins in Solid Foods and Feeds: A Critical Review.	Abou Dib A, Assaf JC, El Khoury A, El Khatib S, Koubaa M, Louka N.	Foods	10.3390/foods11203304	2022
	Evaluation of lactic acid bacteria isolated from poultry feces as potential probiotic and its in vitro competitive activity against Salmonella typhimurium.	Salehizadeh M, Modarressi MH, Mousavi SN, Tajabadi Ebrahimi M.	Vet Res Forum	10.30466/vrf.2018.84395.2110	2020
Metabolism	FMN-dependent oligomerization of putative lactate oxidase from Pediococcus acidilactici.	Ashok Y, Maksimainen MM, Kallio T, Kilpelainen P, Lehtio L.	PLoS One	10.1371/journal.pone.0223870	2020
Metabolism	Isolation and identification of an isoflavone reducing bacterium from feces from a pregnant horse.	Jinglong X, Xiaobin L, Fang Z, Chenchen W, Kailun Y.	PLoS One	10.1371/journal.pone.0223503	2019
	Production of 3-phenyllactic acid and 4-hydroxyphenyllactic acid by Pediococcus acidilactici DSM 20284 fermentation	Mu W, Yu S, Zhu L, Jiang B, Zhang T.	Eur Food Res Technol	10.1007/s00217-012-1768-x	2012
	Effect of cutting height, microbial inoculation, and storage length on fermentation profile and nutrient composition of whole-plant corn silage.	Diepersloot EC, Heinzen C, Saylor BA, Ferraretto LF.	Transl Anim Sci	10.1093/tas/txac037	2022
	Effect of Multiple Rounds of Enrichment on Metabolite Accumulation and Microbiota Composition of Pit Mud for Baijiu Fermentation.	Li D, Ye G, Zong X, Zou W.	Foods	10.3390/foods12081594	2023
Phylogeny	Microbial Community and Fermentation Characteristics of Native Grass Prepared Without or With Isolated Lactic Acid Bacteria on the Mongolian Plateau.	You S, Du S, Ge G, Wan T, Jia Y.	Front Microbiol	10.3389/fmicb.2021.731770	2021
	Characterization of D-lactate dehydrogenase from Pediococcus acidilactici that converts phenylpyruvic acid into phenyllactic acid	Mu W, Yu S, Jiang B, Li X.	Biotechnol Lett		2012
Genetics	Draft genome sequence of probiotic strain Pediococcus acidilactici MA18/5M.	Barreau G, Tompkins TA, de Carvalho VG.	J Bacteriol	10.1128/jb.06563-11	2012
	Probiotic potential and anticancer properties of Pediococcus sp. isolated from traditional dairy products.	Jafari-Nasab T, Khaleghi M, Farsinejad A, Khorrami S.	Biotechnol Rep (Amst)	10.1016/j.btre.2021.e00593	2021
Enzymology	Biological characterization of D-lactate dehydrogenase responsible for high-yield production of D-phenyllactic acid in Sporolactobacillus inulinus.	Cheng YY, Park TH, Seong H, Kim TJ, Han NS.	Microb Biotechnol	10.1111/1751-7915.14125	2022
Enzymology	Pediococcus acidilactici endocarditis successfully treated with daptomycin.	Iwen PC, Mindru C, Kalil AC, Florescu DF.	J Clin Microbiol	10.1128/jcm.05648-11	2012
	Rapid Acidification and Off-Flavor Reduction of Pea Protein by Fermentation with Lactic Acid Bacteria and Yeasts.	Zipori D, Hollmann J, Rigling M, Zhang Y, Weiss A, Schmidt H.	Foods	10.3390/foods13040588	2024
	Substrate Specificity and Allosteric Regulation of a D-Lactate Dehydrogenase from a Unicellular Cyanobacterium are Altered by an Amino Acid Substitution.	Ito S, Takeya M, Osanai T.	Sci Rep	10.1038/s41598-017-15341-5	2017
Metabolism	Catabolism of serine by Pediococcus acidilactici and Pediococcus pentosaceus.	Irmler S, Bavan T, Oberli A, Roetschi A, Badertscher R, Guggenbuhl B, Berthoud H.	Appl Environ Microbiol	10.1128/aem.03085-12	2013
Metabolism	Screening of lactic acid bacteria for their potential as microbial cell factories for bioconversion of lignocellulosic feedstocks.	Boguta AM, Bringel F, Martinussen J, Jensen PR.	Microb Cell Fact	10.1186/s12934-014-0097-0	2014
Pathogenicity	d-Alanyl-d-Alanine Ligase as a Broad-Host-Range Counterselection Marker in Vancomycin-Resistant Lactic Acid Bacteria.	Zhang S, Oh JH, Alexander LM, Ozcam M, van Pijkeren JP.	J Bacteriol	10.1128/jb.00607-17	2018
Enzymology	Biochemical characterisation of four rhamnosidases from thermophilic bacteria of the genera Thermotoga, Caldicellulosiruptor and Thermoclostridium.	Baudrexl M, Schwarz WH, Zverlov VV, Zverlov VV, Liebl W.	Sci Rep	10.1038/s41598-019-52251-0	2019
	Strategies for improving production performance of probiotic Pediococcus acidilactici viable cell by overcoming lactic acid inhibition.	Othman M, Ariff AB, Wasoh H, Kapri MR, Halim M.	AMB Express	10.1186/s13568-017-0519-6	2017
	Assessment of the application for renewal of the authorisation of Pediococcus pentosaceus DSM 16244 as a feed additive for all animal species.	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Kouba M, Kos Durjava M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Woutersen R, Cocconcelli PS, Glandorf B, Herman L, Prieto Maradona M, Saarela M, Anguita M, Galobart J, Holczknecht O, Manini P, Pizzo F, Tarres-Call J, Pettenati E.	EFSA J	10.2903/j.efsa.2020.6166	2020
	The Evaluation of the Effects of Two Probiotic Strains on the Oral Ecosystem: A Randomized Clinical Trial.	Volgenant CMC, van der Waal SV, Brandt BW, Buijs MJ, van der Veen MH, Rosema NAM, Fiebich BL, Rose T, Schmitter T, Gajfulin M, Crielaard W, Zaura E.	Front Oral Health	10.3389/froh.2022.825017	2022
Biotechnology	Lactic acid production - producing microorganisms and substrates sources-state of art.	Abedi E, Hashemi SMB.	Heliyon	10.1016/j.heliyon.2020.e04974	2020
Metabolism	Use of a novel Escherichia coli-leuconostoc shuttle vector for metabolic engineering of Leuconostoc citreum to overproduce D-lactate.	Chae HS, Lee SH, Lee JH, Park SJ, Lee PC.	Appl Environ Microbiol	10.1128/aem.03291-12	2013
	Legumes and Legume-Based Beverages Fermented with Lactic Acid Bacteria as a Potential Carrier of Probiotics and Prebiotics.	Cichonska P, Ziarno M.	Microorganisms	10.3390/microorganisms10010091	2021
Phylogeny	Phenotypic and genotypic characterization of some lactic Acid bacteria isolated from bee pollen: a preliminary study.	Belhadj H, Harzallah D, Bouamra D, Khennouf S, Dahamna S, Ghadbane M.	Biosci Microbiota Food Health	10.12938/bmfh.33.11	2014
	Whole-genome sequence assembly of Pediococcus pentosaceus LI05 (CGMCC 7049) from the human gastrointestinal tract and comparative analysis with representative sequences from three food-borne strains.	Lv LX, Li YD, Hu XJ, Shi HY, Li LJ.	Gut Pathog	10.1186/s13099-014-0036-y	2014
	Combined moist airtight storage and feed fermentation of barley by the yeast Wickerhamomyces anomalus and a lactic acid bacteria consortium.	Borling Welin J, Lyberg K, Passoth V, Olstorpe M.	Front Plant Sci	10.3389/fpls.2015.00270	2015
	Detection of the pediocin gene pedA in strains from human faeces by real-time PCR and characterization of Pediococcus acidilactici UVA1.	Mathys S, von Ah U, Lacroix C, Staub E, Mini R, Cereghetti T, Meile L.	BMC Biotechnol	10.1186/1472-6750-7-55	2007
	Safety and efficacy of Pediococcus pentosaceus DSM 32291 as a silage additive for all animal species.	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Rychen G, Aquilina G, Azimonti G, Bampidis V, Bastos ML, Bories G, Chesson A, Cocconcelli PS, Flachowsky G, Gropp J, Kolar B, Kouba M, Lopez-Alonso M, Lopez Puente S, Mantovani A, Ramos F, Villa RE, Wallace RJ, Wester P, Brozzi R, Saarela M.	EFSA J	10.2903/j.efsa.2018.5202	2018
	Lactobacillus buchneri genotyping on the basis of clustered regularly interspaced short palindromic repeat (CRISPR) locus diversity.	Briner AE, Barrangou R.	Appl Environ Microbiol	10.1128/aem.03015-13	2014
Biotechnology	Sourdough authentication: quantitative PCR to detect the lactic acid bacterial microbiota in breads.	Pontonio E, Di Cagno R, Mahony J, Lanera A, De Angelis M, van Sinderen D, Gobbetti M.	Sci Rep	10.1038/s41598-017-00549-2	2017
	Leuconostoc citreum TR116 as a Microbial Cell Factory to Functionalise High-Protein Faba Bean Ingredients for Bakery Applications.	Hoehnel A, Bez J, Sahin AW, Coffey A, Arendt EK, Zannini E.	Foods	10.3390/foods9111706	2020
	Large-scale metabolic interaction network of the mouse and human gut microbiota.	Lim R, Cabatbat JJT, Martin TLP, Kim H, Kim S, Sung J, Ghim CM, Kim PJ.	Sci Data	10.1038/s41597-020-0516-5	2020
Phylogeny	Phenotypic and genotypic characterization of Pediococcus strains isolated from human clinical sources.	Barros RR, Carvalho MG, Peralta JM, Facklam RR, Teixeira LM.	J Clin Microbiol	10.1128/jcm.39.4.1241-1246.2001	2001
Metabolism	Mesenterocin 52, a bacteriocin produced by Leuconostoc mesenteroides ssp. mesenteroides FR 52.	Mathieu F, Suwandhi IS, Rekhif N, Milliere JB, Lefebvre G.	J Appl Bacteriol	10.1111/j.1365-2672.1993.tb05141.x	1993
Genetics	Comparative genome analysis of Pediococcus damnosus LMG 28219, a strain well-adapted to the beer environment.	Snauwaert I, Stragier P, De Vuyst L, Vandamme P.	BMC Genomics	10.1186/s12864-015-1438-z	2015
Metabolism	Transferase Activity of Lactobacillal and Bifidobacterial beta-Galactosidases with Various Sugars as Galactosyl Acceptors.	Arreola SL, Intanon M, Wongputtisin P, Kosma P, Haltrich D, Nguyen TH.	J Agric Food Chem	10.1021/acs.jafc.5b06009	2016
Metabolism	Characterization and determination of origin of lactic acid bacteria from a sorghum-based fermented weaning food by analysis of soluble proteins and amplified fragment length polymorphism fingerprinting.	Kunene NF, Geornaras I, von Holy A, Hastings JW.	Appl Environ Microbiol	10.1128/aem.66.3.1084-1092.2000	2000
	Release of wine monoterpenes from natural precursors by glycosidases from Oenococcus oeni	Michlmayr H, Nauer S, Brandes W, Schumann C, Kulbe K, del Hierro A, Eder R.	Food Chem		2012
	Heme and menaquinone induced electron transport in lactic acid bacteria.	Brooijmans R, Smit B, Santos F, van Riel J, de Vos WM, Hugenholtz J.	Microb Cell Fact	10.1186/1475-2859-8-28	2009
Genetics	Systematic genomic analysis reveals the complementary aerobic and anaerobic respiration capacities of the human gut microbiota.	Ravcheev DA, Thiele I.	Front Microbiol	10.3389/fmicb.2014.00674	2014
	Preliminary probiotic and technological characterization of Pediococcus pentosaceus strain KID7 and in vivo assessment of its cholesterol-lowering activity.	Damodharan K, Lee YS, Palaniyandi SA, Yang SH, Suh JW.	Front Microbiol	10.3389/fmicb.2015.00768	2015
Pathogenicity	Fish oil enhances recovery of intestinal microbiota and epithelial integrity in chronic rejection of intestinal transplant.	Li Q, Zhang Q, Wang C, Tang C, Zhang Y, Li N, Li J.	PLoS One	10.1371/journal.pone.0020460	2011
Metabolism	Development of a sequence-characterized amplified region marker-targeted quantitative PCR assay for strain-specific detection of Oenococcus oeni during wine malolactic fermentation.	Solieri L, Giudici P.	Appl Environ Microbiol	10.1128/aem.00929-10	2010
Pathogenicity	Variations in the membrane fatty acid composition of resistant or susceptible Leuconostoc or Weissella strains in the presence or absence of Mesenterocin 52A and Mesenterocin 52B produced by Leuconostoc mesenteroides subsp. mesenteroides FR52.	Limonet M, Revol-Junelles AM, Milliere JB.	Appl Environ Microbiol	10.1128/aem.68.6.2910-2916.2002	2002
Phylogeny	Monitoring the bacterial population dynamics in sourdough fermentation processes by using PCR-denaturing gradient gel electrophoresis.	Meroth CB, Walter J, Hertel C, Brandt MJ, Hammes WP.	Appl Environ Microbiol	10.1128/aem.69.1.475-482.2003	2003
Phylogeny	Different fecal microbiotas and volatile organic compounds in treated and untreated children with celiac disease.	Di Cagno R, Rizzello CG, Gagliardi F, Ricciuti P, Ndagijimana M, Francavilla R, Guerzoni ME, Crecchio C, Gobbetti M, De Angelis M.	Appl Environ Microbiol	10.1128/aem.02793-08	2009
	Vancomycin resistance gene vanC is specific to Enterococcus gallinarum.	Leclercq R, Dutka-Malen S, Duval J, Courvalin P.	Antimicrob Agents Chemother	10.1128/aac.36.9.2005	1992
	Improved cloning vectors for bifidobacteria, based on the Bifidobacterium catenulatum pBC1 replicon.	Alvarez-Martin P, Belen Florez A, Margolles A, del Solar G, Mayo B.	Appl Environ Microbiol	10.1128/aem.00074-08	2008
Enzymology	Mur-LH, the broad-spectrum endolysin of Lactobacillus helveticus temperate bacteriophage phi-0303.	Deutsch SM, Guezenec S, Piot M, Foster S, Lortal S.	Appl Environ Microbiol	10.1128/aem.70.1.96-103.2004	2004
Biotechnology	Competitive Exclusion Is a Major Bioprotective Mechanism of Lactobacilli against Fungal Spoilage in Fermented Milk Products.	Siedler S, Rau MH, Bidstrup S, Vento JM, Aunsbjerg SD, Bosma EF, McNair LM, Beisel CL, Neves AR.	Appl Environ Microbiol	10.1128/aem.02312-19	2020
Phylogeny	Genomic diversity within the genus Pediococcus as revealed by randomly amplified polymorphic DNA PCR and pulsed-field gel electrophoresis.	Simpson PJ, Stanton C, Fitzgerald GF, Ross RP.	Appl Environ Microbiol	10.1128/aem.68.2.765-771.2002	2002
Phylogeny	Molecular identification and phylogenetic analysis of GABA-producing lactic acid bacteria isolated from indigenous dadih of West Sumatera, Indonesia.	Anggraini L, Marlida Y, Wizna W, Jamsari J, Mirzah M, Adzitey F, Huda N	F1000Res	10.12688/f1000research.16224.3	2018
Metabolism	Autochthonous lactic acid bacteria isolated from pig faeces in Thailand show probiotic properties and antibacterial activity against enteric pathogenic bacteria.	Sirichokchatchawan W, Pupa P, Praechansri P, Am-In N, Tanasupawat S, Sonthayanon P, Prapasarakul N	Microb Pathog	10.1016/j.micpath.2018.04.031	2018
Metabolism	Lipid-lowering effects of Pediococcus acidilactici M76 isolated from Korean traditional makgeolli in high fat diet-induced obese mice.	Moon YJ, Baik SH, Cha YS	Nutrients	10.3390/nu6031016	2014
Enzymology	Characterization of D-lactate dehydrogenase from Pediococcus acidilactici that converts phenylpyruvic acid into phenyllactic acid.	Mu W, Yu S, Jiang B, Li X	Biotechnol Lett	10.1007/s10529-012-0847-1	2012
Metabolism	Characterization of two distinct glycosyl hydrolase family 78 alpha-L-rhamnosidases from Pediococcus acidilactici.	Michlmayr H, Brandes W, Eder R, Schumann C, del Hierro AM, Kulbe KD	Appl Environ Microbiol	10.1128/AEM.05317-11	2011
Phylogeny	Pediococcus lolii sp. nov., isolated from ryegrass silage.	Doi K, Nishizaki Y, Fujino Y, Ohshima T, Ohmomo S, Ogata S	Int J Syst Evol Microbiol	10.1099/ijs.0.005793-0	2009

References

#8690	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20284
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39737	; Curators of the CIP;
#50918	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32235
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#115999	Collection of Institut Pasteur ; Curators of the CIP; CIP 103408
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pediococcus acidilactici (DSM 20284, KCTC 13734, LMG 11384)

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