Jonesia denitrificans 55134 is an anaerobe, mesophilic, Gram-negative prokaryote that builds an aerial mycelium and was isolated from boiled ox blood.
Gram-negative motile rod-shaped anaerobe mesophilic genome sequence 16S sequence
SI-ID 36187
| @ref 20215 |
|
Last LPSN update
2025-12-16 09:48:17 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Jonesiaceae |
| Genus Jonesia |
| Species Jonesia denitrificans |
| Full scientific name Jonesia denitrificans (Prévot 1961) Rocourt et al. 1987 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8951 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive  | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8951 | BHI MEDIUM (DSMZ Medium 215) | Medium recipe at MediaDive | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water | ||
| 18763 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 18763 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 18763 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 18763 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 37598 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 118898 | CIP Medium 72 | Medium recipe at CIP | |||
| 118898 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 18763 | NaCl | positive | maximum | 7.5 % |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8951 | A11.48 | A4alpha L-Lys-L-Ser-D-Glu |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 18763 | 22599 ChEBI | arabinose | - | ||
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 18763 | 62968 ChEBI | cellulose | - | ||
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 18763 | 28757 ChEBI | fructose | - | ||
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 18763 | 17234 ChEBI | glucose | - | ||
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 18763 | 29864 ChEBI | mannitol | - | ||
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 18763 | 17268 ChEBI | myo-inositol | - | ||
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 118898 | 17632 ChEBI | nitrate | + | reduction | |
| 118898 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 18763 | 16634 ChEBI | raffinose | - | ||
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 18763 | 26546 ChEBI | rhamnose | - | ||
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 18763 | 17992 ChEBI | sucrose | - | ||
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| 18763 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 118898 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | - | from API zym | |
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 118898 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118898 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 |   |
|
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | |
|
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | |
|
| 66794 | adipate degradation | 100 | 2 of 2 | |
|
| 66794 | glycogen metabolism | 100 | 5 of 5 | |
|
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | |
|
| 66794 | starch degradation | 100 | 10 of 10 | |
|
| 66794 | vitamin K metabolism | 100 | 5 of 5 | |
|
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | |
|
| 66794 | denitrification | 100 | 2 of 2 | |
|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | |
|
| 66794 | folate polyglutamylation | 100 | 1 of 1 | |
|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | |
|
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | |
|
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | |
|
| 66794 | heme metabolism | 85.71 | 12 of 14 | |
|
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | |
|
| 66794 | flavin biosynthesis | 80 | 12 of 15 | |
|
| 66794 | methylglyoxal degradation | 80 | 4 of 5 | |
|
| 66794 | threonine metabolism | 80 | 8 of 10 | |
|
| 66794 | photosynthesis | 78.57 | 11 of 14 | |
|
| 66794 | pyrimidine metabolism | 77.78 | 35 of 45 | |
|
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | |
|
| 66794 | valine metabolism | 77.78 | 7 of 9 | |
|
| 66794 | acetate fermentation | 75 | 3 of 4 | |
|
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | |
|
| 66794 | isoleucine metabolism | 75 | 6 of 8 | |
|
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | |
|
| 66794 | peptidoglycan biosynthesis | 73.33 | 11 of 15 | |
|
| 66794 | NAD metabolism | 72.22 | 13 of 18 | |
|
| 66794 | reductive acetyl coenzyme A pathway | 71.43 | 5 of 7 | |
|
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | |
|
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | |
|
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | |
|
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | |
|
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | |
|
| 66794 | purine metabolism | 67.02 | 63 of 94 | |
|
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | |
|
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | |
|
| 66794 | acetoin degradation | 66.67 | 2 of 3 | |
|
| 66794 | serine metabolism | 66.67 | 6 of 9 | |
|
| 66794 | octane oxidation | 66.67 | 2 of 3 | |
|
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | |
|
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | |
|
| 66794 | alanine metabolism | 65.52 | 19 of 29 | |
|
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | |
|
| 66794 | glycolysis | 64.71 | 11 of 17 | |
|
| 66794 | citric acid cycle | 64.29 | 9 of 14 | |
|
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | |
|
| 66794 | oxidative phosphorylation | 62.64 | 57 of 91 | |
|
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | |
|
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | |
|
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | |
|
| 66794 | glutamate and glutamine metabolism | 60.71 | 17 of 28 | |
|
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | |
|
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | |
|
| 66794 | lipid metabolism | 58.06 | 18 of 31 | |
|
| 66794 | methionine metabolism | 57.69 | 15 of 26 | |
|
| 66794 | propanol degradation | 57.14 | 4 of 7 | |
|
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | |
|
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | |
|
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | |
|
| 66794 | leucine metabolism | 53.85 | 7 of 13 | |
|
| 66794 | butanoate fermentation | 50 | 2 of 4 | |
|
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | ethanol fermentation | 50 | 1 of 2 | |
|
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | |
|
| 66794 | ketogluconate metabolism | 50 | 4 of 8 | |
|
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | |
|
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | |
|
| 66794 | histidine metabolism | 48.28 | 14 of 29 | |
|
| 66794 | tryptophan metabolism | 47.37 | 18 of 38 | |
|
| 66794 | degradation of pentoses | 46.43 | 13 of 28 | |
|
| 66794 | arginine metabolism | 45.83 | 11 of 24 | |
|
| 66794 | proline metabolism | 45.45 | 5 of 11 | |
|
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | |
|
| 66794 | non-pathway related | 44.74 | 17 of 38 | |
|
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | |
|
| 66794 | d-mannose degradation | 44.44 | 4 of 9 | |
|
| 66794 | degradation of sugar acids | 44 | 11 of 25 | |
|
| 66794 | glutathione metabolism | 42.86 | 6 of 14 | |
|
| 66794 | lysine metabolism | 40.48 | 17 of 42 | |
|
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | |
|
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | |
|
| 66794 | propionate fermentation | 40 | 4 of 10 | |
|
| 66794 | glycine metabolism | 40 | 4 of 10 | |
|
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | |
|
| 66794 | sulfate reduction | 38.46 | 5 of 13 | |
|
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | |
|
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | |
|
| 66794 | cyanate degradation | 33.33 | 1 of 3 | |
|
| 66794 | methane metabolism | 33.33 | 1 of 3 | |
|
| 66794 | formaldehyde oxidation | 33.33 | 1 of 3 | |
|
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | |
|
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | |
|
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | |
|
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | |
|
| 66794 | ascorbate metabolism | 31.82 | 7 of 22 | |
|
| 66794 | urea cycle | 30.77 | 4 of 13 | |
|
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | |
|
| 66794 | bile acid biosynthesis, neutral pathway | 29.41 | 5 of 17 | |
|
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | |
|
| 66794 | ubiquinone biosynthesis | 28.57 | 2 of 7 | |
|
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | |
|
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | |
|
| 66794 | lactate fermentation | 25 | 1 of 4 | |
|
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | |
|
| 66794 | carnitine metabolism | 25 | 2 of 8 | |
|
| 66794 | degradation of aromatic, nitrogen containing compounds | 25 | 3 of 12 | |
|
| 66794 | dTDPLrhamnose biosynthesis | 25 | 2 of 8 | |
|
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | |
|
| 66794 | arachidonic acid metabolism | 22.22 | 4 of 18 | |
Metadata FA analysis  | ||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 46273 | |||||||||||||||||||||||||||||||||||||||||||||
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| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118898 | not determinedn.d. | +/- | - | - | + | - | + | - | - | - | + | + | + | +/- | - | - | - | - | - | - | - | - | - | - | + | + | + | + | + | +/- | - | + | +/- | - | - | - | + | + | - | + | + | - | - | - | - | - | - | - | - | +/- |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) | |
| #Host Body Product | #Fluids | #Blood |
Global distribution of 16S sequence X83811 (>99% sequence identity) for Jonesia denitrificans subclade from Microbeatlas 
 Aquatic Samples |
156 |
 Soil Samples |
236 |
 Animal Samples |
1091 |
 Plant Samples |
57 |
| Total Samples | 1540 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1904846v1 assembly for Jonesia denitrificans FDAARGOS 1440 | complete | GCA_019048465   | 43674.5  | 8063552596  | 43674 | 98.7 | |
| 66792 | 45232_G01 assembly for Jonesia denitrificans NCTC10816 | complete | GCA_900475835 | 43674.4 | 2808606808 | 43674 | 98.54 | |
| 66792 | ASM2406v1 assembly for Jonesia denitrificans DSM 20603 | complete | GCA_000024065 | 471856.5 | 644736376 | 471856 | 98.54 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Light-inducible carotenoid production controlled by a MarR-type regulator in Corynebacterium glutamicum. | Sumi S, Suzuki Y, Matsuki T, Yamamoto T, Tsuruta Y, Mise K, Kawamura T, Ito Y, Shimada Y, Watanabe E, Watanabe S, Toriyabe M, Takano Shiratori H, Ueda K, Takano H. | Sci Rep | 10.1038/s41598-019-49384-7 | 2019 | |
| Stress | Crystal structure of a phosphoribosyl anthranilate isomerase from the hyperthermophilic archaeon Thermococcus kodakaraensis. | Perveen S, Rashid N, Papageorgiou AC. | Acta Crystallogr F Struct Biol Commun | 10.1107/s2053230x16015223 | 2016 | |
| Metabolism | Degradation of Granular Starch by the Bacterium Microbacterium aurum Strain B8.A Involves a Modular alpha-Amylase Enzyme System with FNIII and CBM25 Domains. | Valk V, Eeuwema W, Sarian FD, van der Kaaij RM, Dijkhuizen L. | Appl Environ Microbiol | 10.1128/aem.01029-15 | 2015 | |
| Genetics | Genomic and proteomic features of mycobacteriophage SWU1 isolated from China soil. | Fan X, Yan J, Xie L, Zeng L, Young RF, Xie J. | Gene | 10.1016/j.gene.2015.02.053 | 2015 | |
| Enzymology | Comprehensive Laboratory Evaluation of a Specific Lateral Flow Assay for the Presumptive Identification of Francisella tularensis in Suspicious White Powders and Aerosol Samples. | Pillai SP, DePalma L, Prentice KW, Ramage JG, Chapman C, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Singh A, Pillai CA, Manickam G, Thirunavkkarasu N, Avila JR, Sharma S, Morse SA, Venkateswaran K, Anderson K, Hodge DR. | Health Secur | 10.1089/hs.2019.0151 | 2020 | |
| Phylogeny | Highly diverse nirK genes comprise two major clades that harbour ammonium-producing denitrifiers. | Helen D, Kim H, Tytgat B, Anne W. | BMC Genomics | 10.1186/s12864-016-2465-0 | 2016 | |
| Metabolism | Cellodextrin utilization by bifidobacterium breve UCC2003. | Pokusaeva K, O'Connell-Motherway M, Zomer A, Macsharry J, Fitzgerald GF, van Sinderen D. | Appl Environ Microbiol | 10.1128/aem.01786-10 | 2011 | |
| Metabolism | Discovery of a cytokinin deaminase. | Goble AM, Fan H, Sali A, Raushel FM. | ACS Chem Biol | 10.1021/cb200198c | 2011 | |
| Enzymology | Comprehensive Laboratory Evaluation of a Lateral Flow Assay for the Detection of Yersinia pestis. | Prentice KW, DePalma L, Ramage JG, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Joshi M, Thirunavvukarasu N, Singh A, Chapman C, Avila JR, Pillai CA, Manickam G, Sharma SK, Morse SA, Venkateswaran KV, Anderson K, Hodge DR, Pillai SP. | Health Secur | 10.1089/hs.2019.0094 | 2019 | |
| Enzymology | Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria. | Selengut JD, Haft DH. | J Bacteriol | 10.1128/jb.00425-10 | 2010 | |
| In silico characterization of pectate lyase protein sequences from different source organisms. | Dubey AK, Yadav S, Kumar M, Singh VK, Sarangi BK, Yadav D. | Enzyme Res | 10.4061/2010/950230 | 2010 | | |
| Identification of putative adhesins of Actinobacillus suis and their homologues in other members of the family Pasteurellaceae. | Bujold AR, MacInnes JI. | BMC Res Notes | 10.1186/s13104-015-1659-x | 2015 | | |
| Metabolism | Genomics of aerobic cellulose utilization systems in actinobacteria. | Anderson I, Abt B, Lykidis A, Klenk HP, Kyrpides N, Ivanova N. | PLoS One | 10.1371/journal.pone.0039331 | 2012 | |
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How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive6314.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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