Name: Tetrasphaera jenkinsii DSM 17519
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6300

Type strain:

Species: Tetrasphaera jenkinsii

Culture col. no.: DSM 17519, NCIMB 14128, Ben 74, JCM 15590, KCTC 39575

Strain history: NCIMB 14128 <-- R. J. Seviour Ben 74.

NCBI tax ID(s): 1193518 (strain), 330834 (species)

Section

Tetrasphaera jenkinsii DSM 17519 is a mesophilic bacterium that was isolated from activated sludge system.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Intrasporangiaceae*
	Genus	Tetrasphaera
	Species	Tetrasphaera jenkinsii
	Full Scientific Name (PNU)	Tetrasphaera jenkinsii McKenzie et al. 2006

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7038]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #7038]

Culture medium growth

[Ref.: #7038]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #7038]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7038]			growth	25 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #7038]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7038]	Sample type/isolated from	activated sludge system
[Ref.: #7038]	Geographic location (country and/or sea, region)	Glenelg, S.A.
[Ref.: #7038]	Country	Australia
[Ref.: #7038]	Country ISO 3 Code	AUS
[Ref.: #7038]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Activated sludge system
[Ref.: #67770]	Country	Australia
[Ref.: #67770]	Country ISO 3 Code	AUS
[Ref.: #67770]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Activated sludge

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ007321 (>99% sequence identity) for Tetrasphaera jenkinsii from Microbeatlas

Aquatic Samples	1498
Soil Samples	119
Animal Samples	186
Plant Samples	13
Total Samples	1816

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7038]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7038]	Tetrasphaera jenkinsii strain Ben 74 16S ribosomal RNA gene, partial sequence	DQ007321	1421	ENA	1193518 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tetrasphaera jenkinsii Ben 74 Ben 74	GCA_001046875	scaffold	GenBank	1193518 tax ID

[Ref.: #67770]

GC-content

68.24 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #7038]

Culture collection no.

DSM 17519, NCIMB 14128, Ben 74, JCM 15590, KCTC 39575

[Ref.: #20218]

Associated Passport(s) in StrainInfo

690573, 690574

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolates of 'Candidatus Nostocoida limicola' Blackall et al. 2000 should be described as three novel species of the genus Tetrasphaera, as Tetrasphaera jenkinsii sp. nov., Tetrasphaera vanveenii sp. nov. and Tetrasphaera veronensis sp. nov.	McKenzie CM, Seviour EM, Schumann P, Maszenan AM, Liu JR, Webb RI, Monis P, Saint CP, Steiner U, Seviour RJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63978-0	2006	*

References

#7038

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17519

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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