Name: Arsenicicoccus piscis Kis4-19
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6241

Type strain:

Species: Arsenicicoccus piscis

Strain Designation: Kis4-19

Culture col. no.: DSM 22760, NBRC 105830, CCUG 63821

Strain history: <- T. Tamura, Natl. Inst. of Technol. and Evaluation (NITE), Japan <- Lino and Iwami; Kis4-19

NCBI tax ID(s): 673954 (species)

SI-ID 400084

DSM 22760

Section

Arsenicicoccus piscis Kis4-19 is a microaerophile, mesophilic bacterium that was isolated from fish gut, Sillago japonica.

mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Dermatophilaceae*
	Genus	*Arsenicicoccus*
	Species	**Arsenicicoccus piscis**
	Full Scientific Name (LPSN)	Arsenicicoccus piscis Hamada et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #63034]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16500]

Culture medium

RICH MEDIUM (DSMZ Medium 736)

[Ref.: #16500]

Culture medium growth

[Ref.: #16500]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16500]

Culture medium composition

expand / minimize

[Ref.: #16500]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #16500]

Culture medium growth

[Ref.: #16500]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16500]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16500]			growth	28 °C
[Ref.: #63034]			growth	37 °C

[Ref.: #16500]	Temperature range	mesophilic
[Ref.: #63034]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63034]

Oxygen tolerance

microaerophile

[Ref.: #16500]	Murein short key	A42.01
[Ref.: #16500]	Murein types	A3gamma' LL-Dpm-Gly

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #63034]

Fatty acid	Percentage	ECL
C15:0 ISO	41.5	14.621
C17:0	12.8	17
C16:0 iso	9.8	15.626
C15:0 ANTEISO	8.7	14.711
C14:0 ISO	7.9	13.618
C17:0 anteiso	4.1	16.722
C17:0 iso	3.9	16.629
C16:0	3.8	16
C15:0	2.2	15
C18:0	2.1	18
C13:0 iso	1.9	12.612
C17:1 ω8c	1.4	16.792

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16500]	Sample type/isolated from	fish gut, Sillago japonica
[Ref.: #16500]	Host species	Sillago japonica
[Ref.: #16500]	Geographic location (country and/or sea, region)	Chiba prefecture, Awa
[Ref.: #16500]	Country	Japan
[Ref.: #16500]	Country ISO 3 Code	JPN
[Ref.: #16500]	Continent	Asia

[Ref.: #63034]	Sample type/isolated from	Intestinal tract of fish,Sillago japonica
[Ref.: #63034]	Geographic location (country and/or sea, region)	Awa,Chiba
[Ref.: #63034]	Country	Japan
[Ref.: #63034]	Country ISO 3 Code	JPN
[Ref.: #63034]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Fishes	-
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16500]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16500]	Arsenicicoccus piscis gene for 16S rRNA, partial sequence	AB521998	1477	ENA	673954 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Arsenicicoccus piscis DSM 22760	GCA_022568835	contig	GenBank	673954 tax ID	*

[Ref.: #16500]

GC-content

71.1 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Arsenicicoccus piscis DSM 22760 NCBI: GCA_022568835.1
[Ref.: #69480]	flagellated	no	98.474	no
[Ref.: #69480]	gram-positive	yes	90.603	no
[Ref.: #69480]	anaerobic	no	97.846	yes
[Ref.: #69480]	aerobic	yes	67.578	yes
[Ref.: #69480]	halophile	no	96.402	no
[Ref.: #69480]	spore-forming	no	89.313	no
[Ref.: #69480]	motile	no	95.038	no
[Ref.: #69480]	glucose-ferment	no	85.931	no
[Ref.: #69480]	thermophile	no	94.622	yes
[Ref.: #69480]	glucose-util	yes	86.154	no

Availability in culture collections External links

[Ref.: #16500]

Culture collection no.

DSM 22760, NBRC 105830, CCUG 63821

[Ref.: #75720]

SI-ID 400084

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ornithinimicrobium murale sp. nov., isolated from an indoor wall colonized by moulds.	Kampfer P, Glaeser SP, Schafer J, Lodders N, Martin K, Schumann P	Int J Syst Evol Microbiol	10.1099/ijs.0.035873-0	2012	*

References

#16500

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22760

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63034 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63821

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75720

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400084.1 )

* These data were automatically processed and therefore are not curated

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Arsenicicoccus piscis DSM 22760

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