Devosia soli (DSM 17780, KACC 11509, GH2-10)

Name: Devosia soli (DSM 17780, KACC 11509, GH2-10)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6166

Type strain

Strain Designation GH2-10

Culture col. no. DSM 17780 KACC 11509 GH2-10

NCBI tax ID(s) 361041

Special Collections DSMZ

Links

Devosia soli GH2-10 is a mesophilic prokaryote that was isolated from greenhouse soil planted with lettuce .

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 402379

DSM 17780

@ref 20215

Last LPSN update 2025-12-16 09:48:15

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Devosiaceae

Genus Devosia

Species Devosia soli

Full scientific name Devosia soli Yoo et al. 2006

Synonyms (1)

Devosia subaequoris

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7184	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7184	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Greenhouse
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
7184	greenhouse soil planted with lettuce (Lactuca sativa L.)	Lactuca sativa	Daejeon City	Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7184	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	ASM97045v1 assembly for Devosia soli GH2-10	contig	GCA_000970455	2654587604	361041	69.4

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7184	Devosia soli strain GH2-10 16S ribosomal RNA gene, partial sequence	DQ303125	1441		361041

GC content

7184

GC-content (mol%)59.5

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Devosia soli GH2-10
NCBI: GCA_000970455

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	81.60	no
125439	motility	BacteriaNetⓘ	yes	50.20	no
125439	gram_stain	BacteriaNetⓘ	negative	77.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	77.70	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Devosia albogilva sp. nov. and Devosia crocina sp. nov., isolated from a hexachlorocyclohexane dump site.	Verma M, Kumar M, Dadhwal M, Kaur J, Lal R	Int J Syst Evol Microbiol	10.1099/ijs.0.005447-0	2009
Phylogeny	Devosia soli sp. nov., isolated from greenhouse soil in Korea.	Yoo SH, Weon HY, Kim BY, Hong SB, Kwon SW, Cho YH, Go SJ, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.64214-0	2006

References

#7184	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17780
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Devosia soli (DSM 17780, KACC 11509, GH2-10)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000970455

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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