Name: Helicobacter pylori T81213-NTB
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6099

Type strain:

Species: Helicobacter pylori

Strain Designation: T81213-NTB

Culture col. no.: DSM 7492, ATCC 49396, JCM 12096, CCUG 45423, CIP 104754, LMG 14378, NCTC 12491

Strain history: CIP 104754 <-- CCUG 45423 <-- ATCC 49396 <-- M. A. Bronsdon T81213-NTB.

NCBI tax ID(s): 210 (species)

Other strains from Helicobacter pylori

H. pylori RPH 13487, CCUG 15815, LMG 7540, ... (type strain)
H. pylori Göteborg 113, DSM 9691, CCUG 21658
H. pylori RPH 13491, DSM 10242, NCTC 11638, ...
H. pylori ASTRA J99, J99, DSM 28160, CCUG ...
H. pylori CIP 104086, JCM 12095
H. pylori CIP 104085, JCM 12094
H. pylori CIP 106780, JCM 12097
H. pylori CIP 101260, JCM 12092, CCUG 18943, ...
H. pylori CCUG 15815 B
H. pylori CCUG 15816 B, LMG 8773
H. pylori CCUG 15817
H. pylori CCUG 15818, ATCC 43629, NCTC 11639, ...
H. pylori CCUG 17135, CCUG 17073
H. pylori CCUG 18295
H. pylori CCUG 18430
H. pylori CCUG 19087
H. pylori CCUG 19104
H. pylori CCUG 19106, LMG 8775
H. pylori CCUG 19107
H. pylori CCUG 19110
H. pylori CCUG 20649
H. pylori CCUG 21365
H. pylori CCUG 21460
H. pylori CCUG 22032
H. pylori CCUG 22035
H. pylori CCUG 22036
H. pylori CCUG 22037
H. pylori CCUG 22110
H. pylori CCUG 22225, LMG 8164
H. pylori CCUG 24780
H. pylori CCUG 30985
H. pylori CCUG 30986
H. pylori CCUG 30987
H. pylori CCUG 30988
H. pylori CCUG 30989
H. pylori CCUG 30990
H. pylori CCUG 30992
H. pylori CCUG 30993
H. pylori CCUG 30994
H. pylori CCUG 31209
H. pylori CCUG 35689
H. pylori CCUG 35899
H. pylori CCUG 35914
H. pylori CCUG 36718
H. pylori CCUG 36719
H. pylori CCUG 38770
H. pylori CCUG 38771
H. pylori CCUG 38772
H. pylori CCUG 39297
H. pylori CCUG 39924
H. pylori CCUG 41936, ATCC 700392, NCTC 12455
H. pylori CCUG 48166
H. pylori CCUG 64957
H. pylori 82894, DSM 105195
H. pylori 85107, DSM 105196
H. pylori 87041, DSM 105197
H. pylori 86298, DSM 105198
H. pylori 85369, DSM 105199
H. pylori 85592, DSM 105200
H. pylori 86153, DSM 105260
H. pylori 83321, DSM 105261
H. pylori G27, DSM 105292
H. pylori J166, DSM 105293
H. pylori PMSS1, DSM 105294
H. pylori 2808, DSM 105296
H. pylori Sydney strain, SS1, DSM 105297
H. pylori Tx30, DSM 105400, ATCC 51932
H. pylori 85593, DSM 105470
H. pylori 85866, DSM 105471

Section

Helicobacter pylori T81213-NTB is a mesophilic Proteobacterium that was isolated from gastric mucosa of pigtailed macaque.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	15-12-2021 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Epsilonproteobacteria
	Order	Campylobacterales
	Family	Helicobacteraceae
	Genus	Helicobacter
	Species	Helicobacter pylori
	Full Scientific Name (PNU)	Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989

	Synonym	Campylobacter pyloridis
	Synonym	Helicobacter nemestrinae
	Synonym	Campylobacter pylori

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3190]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #3190]

Culture medium growth

[Ref.: #3190]

Culture medium link

Medium recipe at BacMedia

[Ref.: #3190]

Culture medium composition

expand / minimize

[Ref.: #39088]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #39088]

Culture medium growth

[Ref.: #39088]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #3190]	growth	37 °C
[Ref.: #39088]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #3190]	Temperature range	mesophilic
[Ref.: #39088]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68373]	acetate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	citrate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	D-glucose ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	hippurate ChEBI	-	hydrolysis	* from API CAM
[Ref.: #68373]	malate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	nitrate ChEBI	-	reduction	* from API CAM
[Ref.: #68373]	propionate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	succinate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	urea ChEBI	+	hydrolysis	* from API CAM

	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #68373]	cefazolin ChEBI	yes	224	µg	* from API CAM
[Ref.: #68373]	erythromycin ChEBI	yes	14	µg	* from API CAM
[Ref.: #68373]	nalidixic acid ChEBI	yes	84	µg	* from API CAM

	Metabolite production	Metabolite
[Ref.: #68373]		hydrogen sulfide ChEBI	* from API CAM

	Enzyme	Enzyme activity	EC number
[Ref.: #68373]	alkaline phosphatase	+	3.1.3.1	* from API CAM
[Ref.: #68373]	catalase	+	1.11.1.6	* from API CAM
[Ref.: #68373]	gamma-glutamyltransferase	+	2.3.2.2	* from API CAM
[Ref.: #68373]	L-aspartate arylamidase	-	3.4.11.21	* from API CAM
[Ref.: #68373]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API CAM
[Ref.: #68373]	urease	+	3.5.1.5	* from API CAM

API® CAM:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Reduction of nitrateNIT	EsteraseEST	Hippuric acidHIP	gamma-Glutamyl transferaseGGT	Reduction of Triphenyl tetrazolium chlorideTTC	Pyrrolidonyl arylamidasePYRA	L-arginine arylamidaseArgA	L-aspartic acid arylamidaseAspA	Alkaline phosphatasePAL	H2S productionH2S	Assimilation of D-glucoseGLU	Assimilation of succinateSUT	Growth inhibitionNAL	Growth inhibitionCFZ	Assimilation of acetateACE	Assimilation of propionic acidPROP	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Erythromycin resistance (+) sensitivity (-)ERO	CatalaseCAT
[Ref.: #3190]	2877	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #3190]	2763	+	-	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #3190]	2762	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #3190]	2760	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #3190]	2759	+	-	+	-	+	+	-	+	-	+	-	-	-	-	-	-	-	-	-	-	+
[Ref.: #3190]	2758	+	-	+/-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3190]	Sample type/isolated from	gastric mucosa of pigtailed macaque
[Ref.: #3190]	Geographic location (country and/or sea, region)	Seattle
[Ref.: #3190]	Country	USA
[Ref.: #3190]	Country ISO 3 Code	USA
[Ref.: #3190]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Gastric mucosa of a 6-year-old healthy pigtailed macaque (Macaca nemestrina)
[Ref.: #67770]	Host species	Macaca nemestrina

Isolation sources categories

#Host	#Mammals	#Primates
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3190]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Helicobacter nemestrinae 16S ribosomal RNA gene, partial sequence	AF348617	1477	ENA	210 tax ID	*
[Ref.: #20218]	Helicobacter nemestrinae strain ATCC49396 16S ribosomal RNA gene, partial sequence	AF363064	1437	ENA	210 tax ID	*
[Ref.: #20218]	H.nemestrinae (ATCC 49396T) gene for 16S rRNA	X67854	1463	ENA	210 tax ID	*
[Ref.: #67770]	Helicobacter pylori JCM 12096 gene for 16S ribosomal RNA, partial sequence	LC507449	1426	ENA	210 tax ID

[Ref.: #3190]	GC-content	24.0 mol%
[Ref.: #67770]	GC-content	24 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #3190]

Culture collection no.

DSM 7492, ATCC 49396, JCM 12096, CCUG 45423, CIP 104754, LMG 14378, NCTC 12491

[Ref.: #20218]

Associated Passport(s) in StrainInfo

160879, 32255, 125694

References

#3190

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7492

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39088 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68373

Automatically annotated from API CAM .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Helicobacter pylori in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF