Name: Chromohalobacter marismortui M.G.1.1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5994

Type strain:

Species: Chromohalobacter marismortui

Strain Designation: M.G.1.1

Culture col. no.: DSM 6770, ATCC 17056, CCM 3518, IAM 14437, JCM 21220, LMG 3935, NBRC 103155, NCIB 8731, NCIMB 2148

Strain history: IAM 14437 <-- ATCC 17056 <-- C. B. van Niel MG.1.1 <-- B. Elazari-Volcani.

NCBI tax ID(s): 42055 (species)

SI-ID 92196

LMG 3935, ATCC 17056, CCM 3518, DSM 6770, NCIB 8731, NCMB 2148, IAM 14437, NCIMB 2148, NCIMB 8731, JCM 21220, CGMCC 1.2321, NBRC 103155

Section

Chromohalobacter marismortui M.G.1.1 is a mesophilic, motile bacterium that was isolated from seawater.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Chromohalobacter*
	Species	**Chromohalobacter marismortui**
	Full Scientific Name (LPSN)	Chromohalobacter marismortui (ex Elazari-Volcani 1940) Ventosa et al. 1989

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.784

[Ref.: #69480]	Motility	yes Confidence in %97.511

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2809]

Culture medium

MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)

[Ref.: #2809]

Culture medium growth

[Ref.: #2809]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2809]

Culture medium composition

expand / minimize

[Ref.: #2809]

Culture medium

MARINOCOCCUS ALBUS - MEDIUM (DSMZ Medium 434)

[Ref.: #2809]

Culture medium growth

[Ref.: #2809]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2809]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #2809]	growth	28 °C
[Ref.: #2809]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #2809]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.019

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2809]	Sample type/isolated from	seawater
[Ref.: #2809]	Geographic location (country and/or sea, region)	Dead sea
[Ref.: #2809]	Country	Israel
[Ref.: #2809]	Country ISO 3 Code	ISR
[Ref.: #2809]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2809]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	C.marismortui 16S rRNA gene, ATCC 17056-T strain	X87219	1423	ENA	42055 tax ID	*
[Ref.: #20218]	Chromohalobacter marismortui gene for 16S rRNA, partial sequence, strain: NBRC 103155	AB681964	1463	ENA	42055 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chromohalobacter marismortui DSM 6770	GCA_004364315	scaffold	GenBank	42055 tax ID
[Ref.: #66792]	Chromohalobacter marismortui strain DSM 6770	42055.3	wgs	PATRIC	42055 tax ID	*
[Ref.: #66792]	Chromohalobacter marismortui DSM 6770	2754412941	draft	JGI IMG/M	42055 tax ID	*

[Ref.: #67770]

GC-content

62.3 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Chromohalobacter marismortui DSM 6770 NCBI: GCA_004364315.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Chromohalobacter marismortui strain DSM 6770 PATRIC: 42055.3
[Ref.: #69480]	gram-positive	no	98.58	no
[Ref.: #69480]	anaerobic	no	99.142	no
[Ref.: #69480]	halophile	yes	95.788	no
[Ref.: #69480]	spore-forming	no	96.255	no
[Ref.: #69480]	glucose-util	yes	93.501	no
[Ref.: #69480]	aerobic	yes	93.945	no
[Ref.: #69480]	motile	yes	93.559	no
[Ref.: #69480]	flagellated	yes	50.643	no
[Ref.: #69480]	thermophile	no	99.09	no
[Ref.: #69480]	glucose-ferment	yes	51.327	no

Availability in culture collections External links

[Ref.: #2809]

Culture collection no.

DSM 6770, ATCC 17056, CCM 3518, IAM 14437, JCM 21220, LMG 3935, NBRC 103155, NCIB 8731, NCIMB 2148

[Ref.: #75483]

SI-ID 92196

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pistricoccus aurantiacus gen. nov., sp. nov., a moderately halophilic bacterium isolated from a shark.	Xu ZX, Liang QY, Lu DC, Chen GJ, Du ZJ	Antonie Van Leeuwenhoek	10.1007/s10482-016-0760-z	2016	*
Phylogeny	Chromohalobacter japonicus sp. nov., a moderately halophilic bacterium isolated from a Japanese salty food.	Sanchez-Porro C, Tokunaga H, Tokunaga M, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.65212-0	2007	*
Phylogeny	Chromohalobacter salexigens sp. nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174.	Arahal DR, Garcia MT, Vargas C, Canovas D, Nieto JJ, Ventosa A	Int J Syst Evol Microbiol	10.1099/00207713-51-4-1457	2001	*

References

#2809

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6770

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75483

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92196.1 )

* These data were automatically processed and therefore are not curated

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Chromohalobacter marismortui DSM 6770

Chromohalobacter marismortui strain DSM 6770

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