Name: Natroniella acetigena Z-7937
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5987

Type strain:

Species: Natroniella acetigena

Strain Designation: Z-7937

Culture col. no.: DSM 9952

Strain history: <- T. N. Zhilina, Z-7937

NCBI tax ID(s): 52004 (species)

SI-ID 48722

DSM 9952, CIP 105131

Special Collections

DSMZ

Section

Natroniella acetigena Z-7937 is an anaerobe, Gram-negative bacterium that was isolated from bottom mud from Lake Magadi.

Gram-negative
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Halanaerobiales*
	Family	*Halobacteroidaceae*
	Genus	*Natroniella*
	Species	**Natroniella acetigena**
	Full Scientific Name (LPSN)	Natroniella acetigena Zhilina et al. 1996

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3763]

Culture medium

NATRONIELLA MEDIUM (DSMZ Medium 784)

[Ref.: #3763]

Culture medium growth

[Ref.: #3763]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3763]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3763]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3763]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3763]	Sample type/isolated from	bottom mud from Lake Magadi
[Ref.: #3763]	Geographic location (country and/or sea, region)	Lake Magadi
[Ref.: #3763]	Country	Kenya
[Ref.: #3763]	Country ISO 3 Code	KEN
[Ref.: #3763]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Mud (Sludge)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X95817 (>99% sequence identity) for Natroniella acetigena subclade from Microbeatlas

Aquatic Samples	8
Soil Samples	3
Animal Samples	27
Plant Samples	15
Total Samples	53

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3763]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Natroniella acetigena partial 16S rRNA gene, type strain DSM 9952T	FR749904	1511	GenBank ENA	52004 tax ID	*
[Ref.: #20218]	N.acetigena 16S rRNA gene	X95817	1461	GenBank ENA	52004 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Natroniella acetigena Z-7937	GCA_023227745	contig	GenBank ENA	52004 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Natroniella acetigena Z-7937 NCBI: GCA_023227745.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	76.386	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	80.541	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	91.098	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	57.835	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	82.378	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	70.874	no

Availability in culture collections External links

[Ref.: #3763]

Culture collection no.

DSM 9952

[Ref.: #75476]

SI-ID 48722

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natroniella acetigena gen. nov. sp. nov., an Extremely Haloalkaliphilic, Homoacetic Bacterium: A New Member of Haloanaerobiales	Zhilina TN, Zavarzin GA, Detkova EN, Rainey FA	Curr Microbiol	10.1007/s002849900057	1996	*
Genetics	Draft Genome Sequence of the Extremely Haloalkaliphilic and Homoacetic Bacterium Natroniella acetigena Z-7937(T).	Huang Y, Nobu MK, Igarashi K, Kato S	Microbiol Resour Announc	10.1128/mra.00472-22	2022	*

References

#3763

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9952

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75476

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48722.1 )

* These data were automatically processed and therefore are not curated

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