Halonotius pteroides (DSM 18729, CECT 7525, JCM 14355)

Name: Halonotius pteroides (DSM 18729, CECT 7525, JCM 14355)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5975

Type strain

Strain Designation 1.15.5, CSW1.15.5

Culture col. no. DSM 18729 CECT 7525 JCM 14355 1.15.5 CSW1.15.5

NCBI tax ID(s) 1333847 268735

Special Collections DSMZ JCM Literature strains

History DSMZ <- D. G. Burns, Univ. Melbourne, Australia; 1.15.5 JCM <-- D. Burns 1.15.5.

Links

Halonotius pteroides 1.15.5 is an aerobe, Gram-negative, motile archaeon that was isolated from solar saltern crystallizer pond.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 370191

CECT 7525,DSM 18729,JCM 14355

@ref 20215

Last LPSN update 2026-05-29 08:26:17

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Haloferacaceae

Genus Halonotius

Species Halonotius pteroides

Full scientific name Halonotius pteroides Burns et al. 2010

BacDive ID	Other strains from **Halonotius pteroides** (3)	Type strain
23053	H. pteroides CSW2.27.5, 2.27.5, DSM 18671, JCM 14356
23054	H. pteroides 5.24.4, CSW5.24.4, DSM 18673, JCM 14357
23055	H. pteroides 6.14.5, CSW6.14.5, DSM 18692, JCM 14358

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
29273	negative	4 µm	1.1 µm	rod-shaped

Pigmentation

29273

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7675	HALOQUADRATUM WALSBYI MEDIUM (DSMZ Medium 1091)		Medium recipe at MediaDive	Name: HALOQUADRATUM WALSBYI MEDIUM (DSMZ Medium 1091) Composition: NaCl 195.0 g/l MgSO4 x 7 H2O 50.0 g/l MgCl2 x 6 H2O 35.0 g/l KCl 5.0 g/l Tris buffer 2.4228 g/l Sodium pyruvate 1.0 g/l NaNO3 1.0 g/l CaCl2 x 2 H2O 0.5 g/l NaHCO3 0.25 g/l KH2PO4 0.05 g/l Yeast extract 0.05 g/l NH4Cl 0.03 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7675	positive	growth	37
29273	positive	growth	25-45
29273	positive	optimum	45
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
29273	positive	optimum	7
29273	positive	growth	5.5-8.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

29273

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
125439		93.575

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29273	NaCl	positive	growth	16-36 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29273	17234 ChEBI	glucose	+	carbon source
29273	17754 ChEBI	glycerol	+	carbon source
29273	15361 ChEBI	pyruvate	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Pond (small)
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7675	solar saltern crystallizer pond	Geelong, Cheetham Salt Works	Australia	AUS	Australia and Oceania
67770	Solar saltern crystallizer	Cheetham Salt Works, Geelong	Australia	AUS	Australia and Oceania

Taxonmaps

69479

Global distribution of 16S sequence AB576121 (>99% sequence identity) for Halonotius pteroides subclade from Microbeatlas

Aquatic Samples	29
Soil Samples	4
Animal Samples	0
Plant Samples	0
Total Samples	33

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7675	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM360563v1 assembly for Halonotius pteroides CECT 7525	contig	GCA_003605635	268735.3	2993750001	268735	54.27

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Halonotius pteroides gene for 16S ribosomal RNA, partial sequence	AB576121	1470	268735
20218	Halonotius pteroides gene for 16S rRNA, complete sequence, strain: JCM 14355	AB663393	1470	268735
7675	Halonotius pteroides strain 1.15.5 16S ribosomal RNA gene, partial sequence	AY498641	1357	1333847

GC content

@ref	GC-content (mol%)	Method
7675	58.4	high performance liquid chromatography (HPLC)
29273	58

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM360563v1 assembly for Halonotius pteroides CECT 7525
NCBI: GCA_003605635

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	63.74	no
125439	gram_stain	BacteriaNetⓘ	negative	45.89	no
125439	motility	BacteriaNetⓘ	yes	46.78	no
125439	spore_formation	BacteriaNetⓘ	no	93.58	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Halonotius pteroides strain CECT 7525
PATRIC: 268735.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	73.97	yes
125438	anaerobic	anaerobicⓘ	no	84.40	yes
125438	spore-forming	spore-formingⓘ	no	87.96	no
125438	aerobic	aerobicⓘ	yes	71.23	yes
125438	thermophilic	thermophileⓘ	no	82.47	yes
125438	flagellated	motile2+ⓘ	no	83.33	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Hypersaline Lake Urmia: a potential hotspot for microbial genomic variation.	Kheiri R, Mehrshad M, Pourbabaee AA, Ventosa A, Amoozegar MA.	Sci Rep	10.1038/s41598-023-27429-2	2023
Enzymology	Bacterial-like nitric oxide synthase in the haloalkaliphilic archaeon Natronomonas pharaonis.	Orsini SS, James KL, Reyes DJ, Couto-Rodriguez RL, Gulko MK, Witte A, Carroll RK, Rice KC.	Microbiologyopen	10.1002/mbo3.1124	2020
Genetics	New Halonotius Species Provide Genomics-Based Insights Into Cobalamin Synthesis in Haloarchaea.	Duran-Viseras A, Andrei AS, Ghai R, Sanchez-Porro C, Ventosa A	Front Microbiol	10.3389/fmicb.2019.01928	2019
Phylogeny	Halonotius aquaticus sp. nov., a new haloarchaeon isolated from a marine saltern.	Duran-Viseras A, Ventosa A, Sanchez-Porro C	Int J Syst Evol Microbiol	10.1099/ijsem.0.003309	2019
Phylogeny	Halonotius pteroides gen. nov., sp. nov., an extremely halophilic archaeon recovered from a saltern crystallizer.	Burns DG, Janssen PH, Itoh T, Kamekura M, Echigo A, Dyall-Smith ML	Int J Syst Evol Microbiol	10.1099/ijs.0.010017-0	2009

References

#7675	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18729
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#25690	IJSEM 1196 2010 ( DOI 10.1099/ijs.0.010017-0 , PubMed 19667389 )
#29273	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25690
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halonotius pteroides (DSM 18729, CECT 7525, JCM 14355)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003605635

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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