Name: Natronococcus jeotgali B1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 5967

Type strain:

Species: Natronococcus jeotgali

Strain Designation: B1

Culture col. no.: DSM 18795, CECT 7216, JCM 14583, KCTC 4018, CGMCC 1.7070, NBRC 110680

Strain history: <- S.W.ROH,KRIBB

NCBI tax ID(s): 1227498 (strain), 413812 (species)

SI-ID 309547

CECT 7216, DSM 18795, KCTC 4018, JCM 14583

Special Collections

Section

Natronococcus jeotgali B1 is an aerobe archaeon that was isolated from salted shrimp jeotgal .

aerobe
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Natrialbales*
	Family	*Natrialbaceae*
	Genus	*Natronococcus*
	Species	**Natronococcus jeotgali**
	Full Scientific Name (LPSN)	Natronococcus jeotgali Roh et al. 2007

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7701]

Culture medium

MEDIUM FOR H. DOMBROWSKII (DSMZ Medium 954)

[Ref.: #7701]

Culture medium growth

[Ref.: #7701]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7701]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7701]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #67771]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7701]	Sample type/isolated from	salted shrimp jeotgal (traditional fermented food in Korea)
[Ref.: #7701]	Country	Republic of Korea
[Ref.: #7701]	Country ISO 3 Code	KOR
[Ref.: #7701]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Shrimp jeotgal, traditional Korean fermented seafood
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From jeotgal
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Seafood
#Host	#Arthropoda	#Crustacea
#Condition	#Saline	-
#Engineered	#Food production	#Fermented

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB663469 (>99% sequence identity) for Natronococcus from Microbeatlas

Aquatic Samples	15
Soil Samples	3
Animal Samples
Plant Samples
Total Samples	18

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7701]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7701]	Natronococcus jeotgali strain B1 16S ribosomal RNA gene, partial sequence	EF077631	1318	GenBank ENA	413812 tax ID
[Ref.: #20218]	Natronococcus jeotgali gene for 16S rRNA, complete sequence, strain: JCM 14583	AB663469	1473	GenBank ENA	413812 tax ID	*
[Ref.: #20218]	Natronococcus jeotgali gene for 16S ribosomal RNA, partial sequence, strain: JCM 14583	AB477232	1433	GenBank ENA	413812 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Natronococcus jeotgali DSM 18795	GCA_000337695	contig	GenBank ENA	1227498 tax ID
[Ref.: #66792]	Natronococcus jeotgali DSM 18795	2554235493	draft	JGI IMG/M	1227498 tax ID	*
[Ref.: #66792]	Natronococcus jeotgali DSM 18795	1227498.3	wgs	PATRIC	1227498 tax ID	*

Availability in culture collections External links

[Ref.: #7701]

Culture collection no.

DSM 18795, CECT 7216, JCM 14583, KCTC 4018, CGMCC 1.7070, NBRC 110680

[Ref.: #75456]

SI-ID 309547

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natronococcus jeotgali sp. nov., a halophilic archaeon isolated from shrimp jeotgal, a traditional fermented seafood from Korea.	Roh SW, Nam YD, Chang HW, Sung Y, Kim KH, Lee HJ, Oh HM, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.65120-0	2007	*

References

#7701

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18795

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75456

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID309547.1 )

* These data were automatically processed and therefore are not curated

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