Name: Halorubrum ezzemoulense Halo-G*
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5955

Type strain:

Species: Halorubrum ezzemoulense

Strain Designation: Halo-G*, HaloG

Culture col. no.: DSM 19316, ATCC BAA-1602, NCIMB 14426, JCM 17875

Strain history: NCIMB 14426 <-- H. Stan-Lotter <-- R. L. Mancinelli Halo-G*.

NCBI tax ID(s): 337243 (species)

SI-ID 399296

DSM 19316

Other strains from Halorubrum ezzemoulense

H. ezzemoulense 5'1, 5.1, DSM 17463, CECT 7099 (type strain)
H. ezzemoulense aus-1, DSM 11365, JCM 9573

Section

Halorubrum ezzemoulense Halo-GHalorubrum ezzemoulense is a mesophilic archaeon that was isolated from salt concentration pond, evaporitic salt crystal.

mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Haloferacales*
	Family	*Halorubraceae*
	Genus	*Halorubrum*
	Species	**Halorubrum ezzemoulense**
	Full Scientific Name (LPSN)	Halorubrum ezzemoulense Kharroub et al. 2006

Synonym

Halorubrum chaoviator

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8032]

Culture medium

HALORUBRUM CHOAVIATOR MEDIUM (DSMZ Medium 1214)

[Ref.: #8032]

Culture medium growth

[Ref.: #8032]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8032]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8032]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #8032]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8032]	Sample type/isolated from	salt concentration pond, evaporitic salt crystal
[Ref.: #8032]	Geographic location (country and/or sea, region)	Baja California, Pacific Coast
[Ref.: #8032]	Country	Mexico
[Ref.: #8032]	Country ISO 3 Code	MEX
[Ref.: #8032]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Evaporitic salt crystal from Baja California
[Ref.: #67770]	Country	Mexico
[Ref.: #67770]	Country ISO 3 Code	MEX
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Pond (small)
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8032]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8032]	Halorubrum chaoviator partial 16S rRNA gene, type strain HALO-G*T	AM048786	1438	ENA	335819 tax ID
[Ref.: #20218]	Halorubrum chaoviator gene for 16S rRNA, complete sequence, strain: DSM 19316	AB663407	1470	ENA	335819 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Halorubrum ezzemoulense DSM 19316	GCA_900188075	contig	GenBank	337243 tax ID
[Ref.: #67770]	Halorubrum ezzemoulense DSM 19316	GCA_002379115	contig	GenBank	337243 tax ID
[Ref.: #66792]	Halorubrum chaoviator DSM 19316	2724679704	draft	JGI IMG/M	335819 tax ID	*
[Ref.: #66792]	Halorubrum chaoviator strain DSM 19316	335819.5	wgs	PATRIC	335819 tax ID	*
[Ref.: #66792]	Halorubrum chaoviator strain DSM 19316	335819.4	wgs	PATRIC	335819 tax ID	*

[Ref.: #8032]	GC-content	65.5 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	65.5 mol%

Availability in culture collections External links

[Ref.: #8032]

Culture collection no.

DSM 19316, ATCC BAA-1602, NCIMB 14426, JCM 17875

[Ref.: #75444]

SI-ID 399296

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Analysis of Carotenoid Production by Halorubrum sp. TBZ126; an Extremely Halophilic Archeon from Urmia Lake.	Naziri D, Hamidi M, Hassanzadeh S, Tarhriz V, Maleki Zanjani B, Nazemyieh H, Hejazi MA, Hejazi MS	Adv Pharm Bull	10.5681/apb.2014.010	2013	*
Metabolism	Identification of polyhydroxyalkanoates in Halococcus and other haloarchaeal species.	Legat A, Gruber C, Zangger K, Wanner G, Stan-Lotter H	Appl Microbiol Biotechnol	10.1007/s00253-010-2611-6	2010	*
Phylogeny	Halorubrum chaoviator sp. nov., a haloarchaeon isolated from sea salt in Baja California, Mexico, Western Australia and Naxos, Greece.	Mancinelli RL, Landheim R, Sanchez-Porro C, Dornmayr-Pfaffenhuemer M, Gruber C, Legat A, Ventosa A, Radax C, Ihara K, White MR, Stan-Lotter H	Int J Syst Evol Microbiol	10.1099/ijs.0.000463-0	2009	*
Phylogeny	Halorubrum chaoviator Mancinelli et al. 2009 is a later, heterotypic synonym of Halorubrum ezzemoulense Kharroub et al. 2006. Emended description of Halorubrum ezzemoulense Kharroub et al. 2006.	Corral P, de la Haba RR, Infante-Dominguez C, Sanchez-Porro C, Amoozegar MA, Papke RT, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijsem.0.003005	2018	*

References

#8032

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19316

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#75444

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399296.1 )

* These data were automatically processed and therefore are not curated

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