Haloterrigena salina (DSM 18196, CGMCC 1.6203, JCM 13891)

Name: Haloterrigena salina (DSM 18196, CGMCC 1.6203, JCM 13891)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5887

Type strain

Strain Designation XH-65

Culture col. no. DSM 18196 CGMCC 1.6203 JCM 13891 XH-65

NCBI tax ID(s) 1227488 504937

Special Collections DSMZ JCM Literature strains

History DSMZ <- A. Ventosa, Univ. Seville, Dept. Microbiol. Parasitol., Spain; XH-65 <- A. M. Castillo et al. JCM <-- A. Ventosa XH-65.

Links

Haloterrigena salina XH-65 is an aerobe, Gram-negative, coccus-shaped archaeon that was isolated from saline Lake Xilinhot.

Gram-negative coccus-shaped aerobe genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 312514

CGMCC 1.6203,JCM 13891,CECT 7146,DSM 18196

@ref 20215

Last LPSN update 2026-05-29 08:26:16

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Natrialbaceae

Genus Haloterrigena

Species Haloterrigena salina

Full scientific name Haloterrigena salina Gutiérrez et al. 2008

Morphology

Cell morphology

@ref	Gram stain	Cell width	Cell shape	Motility
31207	negative	1.2-1.6 µm	coccus-shaped

Pigmentation

31207

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7420	MEDIUM FOR HALOPHILIC ARCHAEA (DSMZ Medium 1184)		Medium recipe at MediaDive	Name: MEDIUM FOR HALOPHILIC ARCHAEA (DSMZ Medium 1184) Composition: NaCl 195.0 g/l MgSO4 x 7 H2O 50.8 g/l MgCl2 x 6 H2O 32.5 g/l Agar 20.0 g/l KCl 5.0 g/l Yeast extract 5.0 g/l CaCl2 x 2 H2O 0.8 g/l NaBr 0.6 g/l NaHCO3 0.16 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7420	positive	growth	37
31207	positive	growth	25-50
31207	positive	optimum	37
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
31207	positive	optimum	07-08
31207	positive	growth	06-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31207	aerobe
125439	facultative anaerobe	93.349

Spore formation

@ref	Spore formation	Confidence
31207
125439		97.271

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31207	NaCl	positive	growth	14.5-29 %
31207	NaCl	positive	optimum	19.72 %

Observation

31207

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31207	30089 ChEBI	acetate	+	carbon source
31207	22599 ChEBI	arabinose	+	carbon source
31207	35391 ChEBI	aspartate	+	carbon source
31207	4853 ChEBI	esculin	+	hydrolysis
31207	28757 ChEBI	fructose	+	carbon source
31207	28260 ChEBI	galactose	+	carbon source
31207	17234 ChEBI	glucose	+	carbon source
31207	29987 ChEBI	glutamate	+	carbon source
31207	17754 ChEBI	glycerol	+	carbon source
31207	17716 ChEBI	lactose	+	carbon source
31207	17306 ChEBI	maltose	+	carbon source
31207	37684 ChEBI	mannose	+	carbon source
31207	17632 ChEBI	nitrate	+	reduction
31207	26986 ChEBI	threonine	+	carbon source
31207	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
31207	catalase	+	1.11.1.6
31207	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
7420	saline Lake Xilinhot	Inner Mongolia (43° 55' N 115° 37' E)	China	CHN	Asia	43.9167	115.617 43.9167/115.617
67770	Salt lake Xilinhot in Inner Mongolia		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB663448 (>99% sequence identity) for Haloterrigena salina from Microbeatlas

Aquatic Samples	1
Soil Samples	0
Animal Samples	0
Plant Samples	0
Total Samples	1

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7420	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM33749v1 assembly for Haloterrigena salina JCM 13891	contig	GCA_000337495	1227488.3	2554235505	1227488	59.58

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Haloterrigena salina gene for 16S rRNA, complete sequence, strain: JCM 13891	AB663448	1475		504937
7420	Haloterrigena salina 16S rRNA gene, type strain XH-65T	AM942763	1421		504937

GC content

@ref	GC-content (mol%)	Method
7420	67.0	thermal denaturation, midpoint method (Tm)
31207	67
67770	67	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM33749v1 assembly for Haloterrigena salina JCM 13891
NCBI: GCA_000337495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	93.35	no
125439	gram_stain	BacteriaNetⓘ	negative	85.93	no
125439	motility	BacteriaNetⓘ	yes	49.09	no
125439	spore_formation	BacteriaNetⓘ	no	97.27	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Decoding the Chemical Language of Ribosomally Synthesized and Post-Translationally Modified Peptides from the Untapped Archaea Domain.	Song ZM, Cai C, Gao Y, Lin X, Yang Q, Zhang D, Wu G, Liang H, Zhuo Q, Zhang J, Cai P, Jiang H, Liu W, Li YX.	Angew Chem Int Ed Engl	10.1002/anie.202501074	2025
	Genomic Insights Into New Species of the Genus Halomicroarcula Reveals Potential for New Osmoadaptative Strategies in Halophilic Archaea.	Duran-Viseras A, Sanchez-Porro C, Ventosa A.	Front Microbiol	10.3389/fmicb.2021.751746	2021
Metabolism	Dihydroxyacetone metabolism in Haloferax volcanii.	Ouellette M, Makkay AM, Papke RT.	Front Microbiol	10.3389/fmicb.2013.00376	2013
Phylogeny	Haloterrigena salifodinae sp. nov., an extremely halophilic archaeon isolated from a subterranean rock salt.	Chen S, Xu Y, Sun S, Chen F	Antonie Van Leeuwenhoek	10.1007/s10482-019-01264-w	2019
Phylogeny	Haloterrigena daqingensis sp. nov., an extremely haloalkaliphilic archaeon isolated from a saline-alkaline soil.	Wang S, Yang Q, Liu ZH, Sun L, Wei D, Zhang JZ, Song JZ, Yuan HF	Int J Syst Evol Microbiol	10.1099/ijs.0.013995-0	2009
Phylogeny	Haloterrigena salina sp. nov., an extremely halophilic archaeon isolated from a salt lake.	Gutierrez MC, Castillo AM, Kamekura M, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/001602-0	2008

References

#7420	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18196
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#27534	IJSEM 2880 2008 ( DOI 10.1099/ijs.0.2008/001602-0 , PubMed 19060076 )
#31207	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27534
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

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Haloterrigena salina (DSM 18196, CGMCC 1.6203, JCM 13891)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000337495

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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