Natrinema thermotolerans (DSM 11552, ATCC 700275, JCM 11050)

Name: Natrinema thermotolerans (DSM 11552, ATCC 700275, JCM 11050)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5884

Type strain

Strain Designation PR5

Culture col. no. DSM 11552 ATCC 700275 JCM 11050 PR5 NBRC 102635 3 more

NCBI tax ID(s) 1227489 121872

Special Collections DSMZ JCM

History DSMZ <- R. Montalvo-Rodríguez; PR5 JCM <-- DSM 11552 <-- R. Montalvo-Rodríguez PR5.

Links

Natrinema thermotolerans PR5 is an archaeon that was isolated from solar salterns.

genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 43859

ATCC 700275,DSM 11552,JCM 11050,NBRC 102635

@ref 20215

Last LPSN update 2026-05-29 08:26:16

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Natrialbaceae

Genus Natrinema

Species Natrinema thermotolerans

Full scientific name Natrinema thermotolerans (Montalvo-Rodríguez et al. 2000) de la Haba et al. 2022

Synonyms (3)

Haloterrigena jeotgali
"Natrinema thermotolerans"
Haloterrigena thermotolerans

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4414	HALOBACTERIA MEDIUM (DSMZ Medium 372)		Medium recipe at MediaDive	Name: HALOBACTERIA MEDIUM (DSMZ Medium 372) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 20.0 g/l Yeast extract 5.0 g/l Casamino acids 5.0 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l Na glutamate 1.0 g/l FeCl2 x 4 H2O 0.036 g/l MnCl2 x 4 H2O 0.00036 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
4414	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	91.261

Spore formation

@ref	Spore formation	Confidence
125439		94.509

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Condition	#Saline

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4414	solar salterns	Cabor Rojo	Puerto Rico	PRI	Middle and South America
67770	Saltern crystallizer pond	Cabo Rojo	Puerto Rico	PRI	North America

Taxonmaps

69479

Global distribution of 16S sequence AB663449 (>99% sequence identity) for Natrialbaceae from Microbeatlas

Aquatic Samples	5
Soil Samples	6
Animal Samples	1
Plant Samples	0
Total Samples	12

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4414	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM33711v1 assembly for Natrinema thermotolerans DSM 11552	contig	GCA_000337115	1227489.4	2534681901	1227489	40.98

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Haloterrigena thermotolerans gene for 16S rRNA, complete sequence, strain: JCM 11050	AB663449	1473		121872
4414	Haloterrigena thermotolerans 16S ribosomal RNA gene, partial sequence	AF115478	1451		121872

GC content

@ref	GC-content (mol%)	Method
4414	63.3
67770	63.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM33711v1 assembly for Natrinema thermotolerans DSM 11552
NCBI: GCA_000337115

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.26	no
125439	gram_stain	BacteriaNetⓘ	negative	55.39	no
125439	motility	BacteriaNetⓘ	yes	41.87	no
125439	spore_formation	BacteriaNetⓘ	no	94.51	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Ecological Trait-Based Digital Categorization of Microbial Genomes for Denitrification Potential.	Isokpehi RD, Kim Y, Krejci SE, Trivedi VD.	Microorganisms	10.3390/microorganisms12040791	2024
	Enhanced UV-B photoprotection activity of carotenoids from the novel Arthrobacter sp. strain LAPM80 isolated from King George Island, Antarctica.	Paredes Contreras BV, Vermelho AB, Casanova L, de Alencar Santos Lage C, Spindola Vilela CL, da Silva Cardoso V, Pacheco Arge LW, Cardoso-Rurr JS, Correa SS, Passos De Mansoldo FR, Pinheiro Pereira Reis-Mansur MC, Alves da Silva E, Schultz J, Rosado AS.	Heliyon	10.1016/j.heliyon.2024.e41400	2025
Genetics	New Insight into Antimicrobial Compounds from Food and Marine-Sourced Carnobacterium Species through Phenotype and Genome Analyses.	Begrem S, Ivaniuk F, Gigout-Chevalier F, Kolypczuk L, Bonnetot S, Leroi F, Grovel O, Delbarre-Ladrat C, Passerini D.	Microorganisms	10.3390/microorganisms8071093	2020
Phylogeny	Haloterrigena saccharevitans sp. nov., an extremely halophilic archaeon from Xin-Jiang, China.	Xu XW, Liu SJ, Tohty D, Oren A, Wu M, Zhou PJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63761-0	2005
Phylogeny	Haloterrigena thermotolerans sp. nov., a halophilic archaeon from Puerto Rico.	Montalvo-Rodriguez R, Lopez-Garriga J, Vreeland RH, Oren A, Ventosa A, Kamekura M	Int J Syst Evol Microbiol	10.1099/00207713-50-3-1065	2000

References

#4414	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11552
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Natrinema thermotolerans (DSM 11552, ATCC 700275, JCM 11050)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000337115

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media