Anoxybacillus thermarum (DSM 17141, ATCC BAA-1156, AF/04)

Name: Anoxybacillus thermarum (DSM 17141, ATCC BAA-1156, AF/04)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 564

Type strain

Strain Designation AF/04

Culture col. no. DSM 17141 ATCC BAA-1156 AF/04

NCBI tax ID(s) 404937

Special Collections DSMZ

Links

Anoxybacillus thermarum AF/04 is a thermophilic prokaryote that was isolated from thermal mud.

thermophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 399921

ATCC BAA-1156,DSM 17141

@ref 20215

Last LPSN update 2025-12-16 09:46:53

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Anoxybacillus

Species Anoxybacillus thermarum

Full scientific name Anoxybacillus thermarum Poli et al. 2011

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6787	MODIFIED TH AGAR (DSMZ Medium 1061)		Medium recipe at MediaDive	Name: MODIFIED TH AGAR (DSMZ Medium 1061) Composition: Tryptone 5.0 g/l NaCl 5.0 g/l Yeast extract 3.0 g/l MnSO4 x H2O 0.01 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l Na2MoO4 x 2 H2O 3e-05 g/l MnCl2 x 4 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Agar Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6787	positive	growth	55	thermophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6787	thermal mud	Euganean hot spring, Abano Terme, Padova	Italy	ITA	Europe

Taxonmaps

69479

Global distribution of 16S sequence JF292514 (>99% sequence identity) for Anoxybacillus from Microbeatlas

Aquatic Samples	335
Soil Samples	183
Animal Samples	1423
Plant Samples	87
Total Samples	2028

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6787	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM83672v1 assembly for Anoxybacillus thermarum AF/04	contig	GCA_000836725	404937.3	2648501677	404937	45.57

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Anoxybacillus thermarum strain DSM 17141 16S ribosomal RNA gene, partial sequence	JF292514	1358		404937
6787	Anoxybacillus thermarum partial 16S rRNA gene, type strain AF/04T	AM402982	1140		404937

GC content

@ref	GC-content (mol%)	Method
6787	53.5	fluorimetric

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Anoxybacillus thermarum AF/04
NCBI: GCA_000836725

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	79.90	no
125439	motility	BacteriaNetⓘ	yes	76.80	no
125439	gram_stain	BacteriaNetⓘ	variable	77.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Anoxybacillus thermarum strain AF/04
PATRIC: 404937.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	77.84	no
125438	anaerobic	anaerobicⓘ	no	78.78	no
125438	spore-forming	spore-formingⓘ	yes	89.79	no
125438	aerobic	aerobicⓘ	yes	51.54	no
125438	thermophilic	thermophileⓘ	yes	70.10	yes
125438	flagellated	motile2+ⓘ	yes	76.99	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome Sequence of Anoxybacillus thermarum AF/04T, Isolated from the Euganean Hot Springs in Abano Terme, Italy.	Poli A, Nicolaus B, Chan KG, Kahar UM, Chan CS, Goh KM	Genome Announc	10.1128/genomeA.00490-15	2015
Phylogeny	Anoxybacillus thermarum sp. nov., a novel thermophilic bacterium isolated from thermal mud in Euganean hot springs, Abano Terme, Italy.	Poli A, Romano I, Cordella P, Orlando P, Nicolaus B, Ceschi Berrini C	Extremophiles	10.1007/s00792-009-0274-y	2009

References

#6787	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17141
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Anoxybacillus thermarum (DSM 17141, ATCC BAA-1156, AF/04)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000836725

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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