Name: Aquimarina muelleri DSM 19832
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5594

Type strain:

Species: Aquimarina muelleri

Culture col. no.: DSM 19832, KCTC 12285, KMM 6020, LMG 22569

Strain history: <- Seung Bum Kim <- Olga I Nedashkovskaya, KMM, Russia

NCBI tax ID(s): 1121007 (strain), 279356 (species)

SI-ID 131845

LMG 22569, KCTC 12285, DSM 19832

Section

Aquimarina muelleri DSM 19832 is an aerobe, mesophilic, motile bacterium that was isolated from sea-water sample.

motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Aquimarina*
	Species	**Aquimarina muelleri**
	Full Scientific Name (LPSN)	Aquimarina muelleri Nedashkovskaya et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.992

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	yes

[Ref.: #67771]	Flagellum arrangement	gliding

Multimedia content

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Caption:

electron microscopic image

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Intellectual property rights:

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electron microscopic image

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Intellectual property rights:

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Caption:

electron microscopic image

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Intellectual property rights:

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Caption:

electron microscopic image

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8340]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #8340]

Culture medium growth

[Ref.: #8340]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8340]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8340]			growth	28 °C
[Ref.: #67771]			growth	25 °C

[Ref.: #8340]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.988

[Ref.: #67771]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8340]	Sample type/isolated from	sea-water sample
[Ref.: #8340]	Geographic location (country and/or sea, region)	Sea of Japan, Gulf of Peter the Great, Amursky Bay
[Ref.: #8340]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From seawater
[Ref.: #67771]	Geographic location (country and/or sea, region)	Amursky Bay, Gulf of Peter the Great, Sea of Japan
[Ref.: #67771]	Country	Russia
[Ref.: #67771]	Country ISO 3 Code	RUS
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY608406 (>99% sequence identity) for Aquimarina muelleri subclade from Microbeatlas

Aquatic Samples	109
Soil Samples	4
Animal Samples	40
Plant Samples
Total Samples	153

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8340]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8340]	Aquimarina muelleri strain KMM 6020 16S ribosomal RNA gene, partial sequence	AY608406	1427	ENA	279356 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aquimarina muelleri KCTC 12285	GCA_014651355	scaffold	GenBank	279356 tax ID	*
[Ref.: #66792]	Aquimarina muelleri DSM 19832	GCA_000430665	scaffold	GenBank	1121007 tax ID	*
[Ref.: #66792]	Aquimarina muelleri DSM 19832	1121007.3	wgs	PATRIC	1121007 tax ID	*
[Ref.: #66792]	Aquimarina muelleri strain KCTC 12285	279356.3	wgs	PATRIC	279356 tax ID	*
[Ref.: #66792]	Aquimarina muelleri DSM 19832	2524023059	draft	JGI IMG/M	1121007 tax ID	*

[Ref.: #67771]

GC-content

31.6-32.5 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aquimarina muelleri DSM 19832 DSM 19832 NCBI: GCA_000430665.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aquimarina muelleri DSM 19832 DSM 19832 NCBI: GCA_000430665.1
[Ref.: #69480]	motile	no	87.085	no
[Ref.: #69480]	flagellated	no	91.193	no
[Ref.: #69480]	gram-positive	no	97.954	yes
[Ref.: #69480]	anaerobic	no	99.158	yes
[Ref.: #69480]	aerobic	yes	86.281	no
[Ref.: #69480]	halophile	no	69.622	no
[Ref.: #69480]	spore-forming	no	92.207	no
[Ref.: #69480]	glucose-util	yes	77.443	no
[Ref.: #69480]	thermophile	no	99.496	yes
[Ref.: #69480]	glucose-ferment	no	89.714	no

Availability in culture collections External links

[Ref.: #8340]

Culture collection no.

DSM 19832, KCTC 12285, KMM 6020, LMG 22569

[Ref.: #75076]

SI-ID 131845

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquimarina sediminis sp. nov., isolated from coastal sediment.	Wang NN, Zhou LY, Li YX, Du ZJ	Antonie Van Leeuwenhoek	10.1007/s10482-018-1115-8	2018	*
Phylogeny	Aquimarina celericrescens sp. nov., isolated from seawater.	Wang NN, Li CM, Li YX, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002733	2018	*
Phylogeny	Aquimarina aggregata sp. nov., isolated from seawater.	Wang Y, Ming H, Guo W, Chen H, Zhou C	Int J Syst Evol Microbiol	10.1099/ijsem.0.001209	2016	*
Phylogeny	Aquimarina penaei sp. nov., isolated from intestinal tract contents of Pacific white shrimp, Penaeus vannamei.	Li X, Wang L, Huang H, Lai Q, Shao Z	Antonie Van Leeuwenhoek	10.1007/s10482-014-0292-3	2014	*
Phylogeny	Aquimarina pacifica sp. nov., isolated from seawater.	Zhang Z, Yu T, Xu T, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijs.0.062695-0	2014	*
Phylogeny	Aquimarina longa sp. nov., isolated from seawater, and emended description of Aquimarina muelleri.	Yu T, Yin Q, Song X, Zhao R, Shi X, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijs.0.041509-0	2012	*
Phylogeny	Aquimarina litoralis sp. nov., isolated from a coastal seawater.	Oh YS, Kahng HY, Lee YS, Yoon BJ, Lim SB, Jung JS, Oh DC, Lee DH	J Microbiol	10.1007/s12275-010-0088-8	2010	*
Phylogeny	Description of Aquimarina muelleri gen. nov., sp. nov., and proposal of the reclassification of [Cytophaga] latercula Lewin 1969 as Stanierella latercula gen. nov., comb. nov.	Nedashkovskaya OI, Kim SB, Lysenko AM, Frolova GM, Mikhailov VV, Lee KH, Bae KS	Int J Syst Evol Microbiol	10.1099/ijs.0.63349-0	2005	*

References

#8340

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19832

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75076

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID131845.1 )

* These data were automatically processed and therefore are not curated

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Aquimarina muelleri DSM 19832 DSM 19832

Aquimarina muelleri DSM 19832 DSM 19832

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