Name: Flavobacterium limicola ST-10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5533

Type strain:

Species: Flavobacterium limicola

Strain Designation: ST-10

Culture col. no.: DSM 14768, JCM 11474

Strain history: H. Tamaki ST-10.

NCBI tax ID(s): 180441 (species)

SI-ID 111723

JCM 11474, DSM 14768

Other strains from Flavobacterium limicola

F. limicola ST-82, DSM 15094, JCM 11473, CCUG ... (type strain)
F. limicola ST-92, DSM 15093, JCM 11475

Section

Flavobacterium limicola ST-10 is a psychrophilic bacterium that was isolated from river sediments.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium limicola**
	Full Scientific Name (LPSN)	Flavobacterium limicola Tamaki et al. 2003

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5529]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #5529]

Culture medium growth

[Ref.: #5529]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5529]

Culture medium composition

expand / minimize

[Ref.: #5529]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5529]

Culture medium growth

[Ref.: #5529]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5529]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5529]			growth	15 °C
[Ref.: #67770]			growth	15 °C

[Ref.: #5529]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5529]	Sample type/isolated from	river sediments
[Ref.: #5529]	Geographic location (country and/or sea, region)	Ibaraki Pref., Shin River
[Ref.: #5529]	Country	Japan
[Ref.: #5529]	Country ISO 3 Code	JPN
[Ref.: #5529]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Freshwater river sediments
[Ref.: #67770]	Geographic location (country and/or sea, region)	Ibaraki Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#River (Creek)
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5529]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5529]	Flavobacterium limicola gene for 16S ribosomal RNA, strain:ST-10	AB075231	1475	ENA	180441 tax ID

[Ref.: #67770]

GC-content

34.8 mol%

Availability in culture collections External links

[Ref.: #5529]

Culture collection no.

DSM 14768, JCM 11474

[Ref.: #75016]

SI-ID 111723

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium limicola sp. nov., a psychrophilic, organic-polymer-degrading bacterium isolated from freshwater sediments.	Tamaki H, Hanada S, Kamagata Y, Nakamura K, Nomura N, Nakano K, Matsumura M	Int J Syst Evol Microbiol	10.1099/ijs.0.02369-0	2003	*

References

#5529

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14768

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#75016

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID111723.1 )

* These data were automatically processed and therefore are not curated

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