Name: Cellulophaga lytica WFB -21
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5498

Type strain:

Species: Cellulophaga lytica

Strain Designation: WFB -21

Culture col. no.: DSM 2040, ATCC 23169, IFO 15986, NBRC 15986, Cy l1

Strain history: <- H. Reichenbach, Cy l1 <- ATCC <- R.A. Lewin, WFB -21

NCBI tax ID(s): 979 (species)

SI-ID 7338

LMG 13155, ATCC 23169, DSM 2040, IFO 15986, NCIMB 1395, NBRC 15986, NRRL B-14734

Other strains from Cellulophaga lytica

C. lytica LIM -21, LIM 21, DSM 7489, ATCC ... (type strain)
C. lytica DSM 2039, IFO 15985, NBRC 15985, ...

Section

Cellulophaga lytica WFB -21 is a bacterium that was isolated from sea-water aquarium outflow.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Cellulophaga*
	Species	**Cellulophaga lytica**
	Full Scientific Name (LPSN)	Cellulophaga lytica (Lewin 1969) Johansen et al. 1999

Synonym

Cytophaga lytica

Information on culture and growth conditions Culture and growth conditions

[Ref.: #683]

Culture medium

CYTOPHAGA (marine) MEDIUM (DSMZ Medium 172)

[Ref.: #683]

Culture medium growth

[Ref.: #683]

Culture medium link

Medium recipe at MediaDive

[Ref.: #683]

Culture medium composition

expand / minimize

[Ref.: #683]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #683]

Culture medium growth

[Ref.: #683]

Culture medium link

Medium recipe at MediaDive

[Ref.: #683]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #683]			growth	20-30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #683]	Sample type/isolated from	sea-water aquarium outflow
[Ref.: #683]	Geographic location (country and/or sea, region)	California, La Jolla
[Ref.: #683]	Country	USA
[Ref.: #683]	Country ISO 3 Code	USA
[Ref.: #683]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	#Water reservoir (Aquarium/pool)
#Environmental	#Aquatic	#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB681017 (>99% sequence identity) for Cellulophaga from Microbeatlas

Aquatic Samples	3313
Soil Samples	208
Animal Samples	185
Plant Samples	82
Total Samples	3788

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #683]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Cellulophaga lytica gene for 16S rRNA, partial sequence, strain: NBRC 15986	AB681017	1445	ENA	979 tax ID	*

[Ref.: #683]

GC-content

34.2 mol%

Availability in culture collections External links

[Ref.: #683]

Culture collection no.

DSM 2040, ATCC 23169, IFO 15986, NBRC 15986, Cy l1

[Ref.: #74983]

SI-ID 7338

References

#683	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2040

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#74983

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7338.1 )

* These data were automatically processed and therefore are not curated

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