Capnocytophaga cynodegmi (MCCM 00247, LMG 11513, MCCM 00265)

Name: Capnocytophaga cynodegmi (MCCM 00247, LMG 11513, MCCM 00265)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5494

Type strain

Strain Designation 79120329, E6447

Culture col. no. MCCM 00247 LMG 11513 MCCM 00265 LMG 11540 DSM 19736 7 more

NCBI tax ID(s) 926551 28189

Special Collections DSMZ CCUG CIP

History DSMZ <- CIP <- ATCC <- R. E. Weaver, CDC; strain 79120329, strain E6447 <- Virginia State Hlth. Lab., USA <- F. J. Marsik, Clinical Lab. Univ., Virginia Hosp., USA CIP <- 1994, CCTM <- 1993, ATCC <- R.E. Weaver, CDC: strain 79120329 <- Virginia State Hlth. Lab., USA <- 1979, F.J. Marsik, Clinical Lab. Univ., Virginia Hosp., USA

Links

Capnocytophaga cynodegmi 79120329 is a microaerophile, Gram-negative, rod-shaped human pathogen that was isolated from mouth of a dog.

Gram-negative rod-shaped microaerophile human pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 7608

LMG 11513,ATCC 49044,CCUG 24742,LMG 11540,CIP 103937,CCUG 36489,NCTC 12243,DSM 19736

@ref 20215

Last LPSN update 2026-05-29 08:26:11

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Capnocytophaga

Species Capnocytophaga cynodegmi

Full scientific name Capnocytophaga cynodegmi Brenner et al. 1990

BacDive ID	Other strains from **Capnocytophaga cynodegmi** (5)	Type strain
143538	C. cynodegmi CCUG 19954
146217	C. cynodegmi CCUG 30624, MCCM 00262, LMG 11538
146218	C. cynodegmi CCUG 30625, MCCM 00263, LMG 11539
149924	C. cynodegmi CCUG 38690
154589	C. cynodegmi CCUG 54501

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
118831	negative	rod-shaped
125439	negative		99.313
125438			91.479
125438	negative		96.443

Colony morphology

8133

Incubation period2-3 days

Multimedia

@ref:	66793
multimedia content:	EM_DSM_19736_1.jpg
multimedia.multimedia content:	EM_DSM_19736_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8133	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
34432	MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
118831	CIP Medium 10	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8133	positive	growth	37
34432	positive	growth	37
118831	positive	growth	37
118831	negative	growth	30
118831	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8133	microaerophile
118831	facultative anaerobe
125439	obligate aerobe	92.879

Spore formation

@ref	Spore formation	Confidence
125439		99.763
125438		91.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
118831	16947 ChEBI	citrate	-	carbon source
118831	15824 ChEBI	D-fructose	+	degradation
118831	17634 ChEBI	D-glucose	-	degradation
118831	4853 ChEBI	esculin	+	hydrolysis
118831	606565 ChEBI	hippurate	-	hydrolysis
118831	17632 ChEBI	nitrate	-	reduction
118831	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
118831	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
118831	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
118831	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
118831	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
118831	gamma-glutamyltransferase	-	2.3.2.2
118831	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
118831	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
118831	ornithine decarboxylase	-	4.1.1.17
118831	oxidase	+
118831	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
118831	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	coenzyme A metabolism	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	vitamin K metabolism	100	5 of 5
66794	gluconeogenesis	100	8 of 8
66794	palmitate biosynthesis	100	22 of 22
66794	sulfopterin metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	adipate degradation	100	2 of 2
66794	biotin biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	starch degradation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	glycogen metabolism	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	lipid A biosynthesis	77.78	7 of 9
66794	acetate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	NAD metabolism	72.22	13 of 18
66794	heme metabolism	71.43	10 of 14
66794	purine metabolism	69.15	65 of 94
66794	serine metabolism	66.67	6 of 9
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	d-mannose degradation	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	flavin biosynthesis	66.67	10 of 15
66794	pyrimidine metabolism	66.67	30 of 45
66794	vitamin B6 metabolism	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	Entner Doudoroff pathway	60	6 of 10
66794	propionate fermentation	60	6 of 10
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	threonine metabolism	60	6 of 10
66794	glycolysis	58.82	10 of 17
66794	citric acid cycle	57.14	8 of 14
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	degradation of hexoses	55.56	10 of 18
66794	lipid metabolism	54.84	17 of 31
66794	glutamate and glutamine metabolism	53.57	15 of 28
66794	non-pathway related	52.63	20 of 38
66794	alanine metabolism	51.72	15 of 29
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	cysteine metabolism	50	9 of 18
66794	ethanol fermentation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	isoleucine metabolism	50	4 of 8
66794	kanosamine biosynthesis II	50	1 of 2
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	oxidative phosphorylation	48.35	44 of 91
66794	phenylalanine metabolism	46.15	6 of 13
66794	pentose phosphate pathway	45.45	5 of 11
66794	degradation of sugar acids	44	11 of 25
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	tyrosine metabolism	42.86	6 of 14
66794	isoprenoid biosynthesis	42.31	11 of 26
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	lysine metabolism	40.48	17 of 42
66794	lipoate biosynthesis	40	2 of 5
66794	O-antigen biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	degradation of pentoses	39.29	11 of 28
66794	sulfate reduction	38.46	5 of 13
66794	leucine metabolism	38.46	5 of 13
66794	vitamin B1 metabolism	38.46	5 of 13
66794	ketogluconate metabolism	37.5	3 of 8
66794	tryptophan metabolism	36.84	14 of 38
66794	metabolism of disaccharids	36.36	4 of 11
66794	proline metabolism	36.36	4 of 11
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	pantothenate biosynthesis	33.33	2 of 6
66794	L-lactaldehyde degradation	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	formaldehyde oxidation	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	degradation of sugar alcohols	31.25	5 of 16
66794	methionine metabolism	30.77	8 of 26
66794	polyamine pathway	30.43	7 of 23
66794	coenzyme M biosynthesis	30	3 of 10
66794	glycine metabolism	30	3 of 10
66794	myo-inositol biosynthesis	30	3 of 10
66794	propanol degradation	28.57	2 of 7
66794	mevalonate metabolism	28.57	2 of 7
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	histidine metabolism	27.59	8 of 29
66794	d-xylose degradation	27.27	3 of 11
66794	cyclohexanol degradation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	arginine metabolism	25	6 of 24
66794	toluene degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	lactate fermentation	25	1 of 4
66794	urea cycle	23.08	3 of 13
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	ascorbate metabolism	22.73	5 of 22
66794	valine metabolism	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18
66794	glutathione metabolism	21.43	3 of 14

Fatty acid profile

Metadata FA analysis

@ref

48031

Fatty acid	Percentage	ECL
C15:0 ISO	59.1	14.621
C17:0 iso 3OH	10.9	18.161
unknown 13.566	4.8	13.566
C16:0	4.4	16
C16:0 3OH	3.5	17.52
C15:0 ANTEISO	3.1	14.711
C15:0 ISO 3OH	3	16.135
C18:2 ω6,9c/C18:0 ANTE	2.7	17.724
C18:1 ω9c	1.4	17.769
C14:0	1.4	14
C13:1 at 12-13	1.3	12.931
C17:0 iso	1.2	16.629
C18:0	1	18
unknown 16.580	1	16.58
C13:0 iso	0.8	12.612
C16:0 iso	0.5	15.626

Metadata FA analysis

@ref

48031

Fatty acid	Percentage	ECL
C15:0 ISO	68.3	14.621
C17:0 iso 3OH	10.8	18.161
C15:0 ISO 3OH	3.8	16.135
unknown 13.566	3.5	13.566
C15:0 ANTEISO	2.6	14.711
C16:0	1.9	16
C14:0	1.7	14
C18:2 ω6,9c/C18:0 ANTE	1.6	17.724
C18:1 ω9c	1.4	17.769
C13:1 at 12-13	1.3	12.931
C13:0 iso	1	12.612
C18:0	0.6	18
C17:0 iso	0.5	16.629
C18:1 2OH	0.4	19.088
unknown 16.580	0.4	16.58
C16:1 ω7c	0.2	15.819

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
118831	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	+	-	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
118831	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Oral cavity and airways	#Mouth

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
8133	mouth of a dog		Virginia	USA	USA	North America
48031	Dog mouth	1979	Virginia	USA	USA	North America
118831	Animal, Dog, mouth		Virginia	United States of America	USA	North America	1979

Taxonmaps

69479

Global distribution of 16S sequence X97245 (>99% sequence identity) for Capnocytophaga cynodegmi from Microbeatlas

Aquatic Samples	2
Soil Samples	19
Animal Samples	1891
Plant Samples	1
Total Samples	1913

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
8133			2	Risk group (German classification) According to TRBA 466
118831			1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM37918v1 assembly for Capnocytophaga cynodegmi DSM 19736 E6447	scaffold	GCA_000379185	926551.3	2513237123	926551	71.98
66792	Ccyn49044.1 assembly for Capnocytophaga cynodegmi Ccyn_ATCC49044	contig	GCA_000827655	28189.4	2651869793	28189	57.47

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Capnocytophaga cynodegmi strain CIP 103937 16S ribosomal RNA gene, partial sequence	AY643076	1438	926551
20218	Capnocytophaga cynodegmi 16S ribosomal RNA	L14638	1463	28189
20218	C.cynodegmi 16S rRNA gene	X97245	1427	28189
8133	Capnocytophaga cynodegmi strain CIP 103937 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AY661854	3547	926551

GC content

8133

GC-content (mol%)34

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM37918v1 assembly for Capnocytophaga cynodegmi DSM 19736 E6447
BV-BRC: 926551.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	92.88	no
125439	gram_stain	BacteriaNetⓘ	negative	99.31	no
125439	motility	BacteriaNetⓘ	no	77.05	no
125439	spore_formation	BacteriaNetⓘ	no	99.76	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Capnocytophaga cynodegmi DSM 19736 E6447
NCBI: GCA_000379185.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.44	no
125438	anaerobic	anaerobicⓘ	no	89.70	yes
125438	aerobic	aerobicⓘ	no	68.66	yes
125438	spore-forming	spore-formingⓘ	no	91.60	no
125438	thermophilic	thermophileⓘ	no	96.20	yes
125438	flagellated	motile2+ⓘ	no	91.48	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Capnocytophaga cynodegmi bacteremia associated with a cat bite in a patient with systemic lupus erythematosus on hemodialysis: A case report.	Nakao M, Hosokawa N, Ziren W, Yamamoto T, Ebisu Y, Watanabe N, Watari T, Otsuka Y, Osawa R.	IDCases	10.1016/j.idcr.2025.e02240	2025
	LolA and LolB are conserved in Bacteroidota and are crucial for gliding motility and Type IX secretion.	De Smet T, Baland E, Giovannercole F, Mignon J, Lizen L, Dugauquier R, Lauber F, Dieu M, Lima-Mendez G, Michaux C, Devos D, Renzi F.	Commun Biol	10.1038/s42003-025-07817-2	2025
Phylogeny	Molecular diversity of rumen bacterial communities from tannin-rich and fiber-rich forage fed domestic Sika deer (Cervus nippon) in China.	Li ZP, Liu HL, Li GY, Bao K, Wang KY, Xu C, Yang YF, Yang FH, Wright AD.	BMC Microbiol	10.1186/1471-2180-13-151	2013
Phylogeny	Occurrence and molecular characteristics of methicillin-resistant Staphylococcus aureus and methicillin-resistant Staphylococcus pseudintermedius in an academic veterinary hospital.	Ishihara K, Shimokubo N, Sakagami A, Ueno H, Muramatsu Y, Kadosawa T, Yanagisawa C, Hanaki H, Nakajima C, Suzuki Y, Tamura Y.	Appl Environ Microbiol	10.1128/aem.02780-09	2010
	The application of rumen simulation technique (RUSITEC) for studying dynamics of the bacterial community and metabolome in rumen fluid and the effects of a challenge with Clostridium perfringens.	Wetzels SU, Eger M, Burmester M, Kreienbrock L, Abdulmawjood A, Pinior B, Wagner M, Breves G, Mann E.	PLoS One	10.1371/journal.pone.0192256	2018
Phylogeny	Identification of Virulent Capnocytophaga canimorsus Isolates by Capsular Typing.	Hess E, Renzi F, Koudad D, Dol M, Cornelis GR.	J Clin Microbiol	10.1128/jcm.00249-17	2017
Phylogeny	Only a subset of C. canimorsus strains is dangerous for humans.	Renzi F, Dol M, Raymackers A, Manfredi P, Cornelis GR.	Emerg Microbes Infect	10.1038/emi.2015.48	2015
	Genetic tools for studying Capnocytophaga canimorsus.	Mally M, Cornelis GR.	Appl Environ Microbiol	10.1128/aem.01218-08	2008
	Intracellular multiplication and toxic destruction of cultured macrophages by Capnocytophaga canimorsus.	Fischer LJ, Weyant RS, White EH, Quinn FD.	Infect Immun	10.1128/iai.63.9.3484-3490.1995	1995
Phylogeny	Molecular characterization of Capnocytophaga canimorsus and other canine Capnocytophaga spp. and assessment by PCR of their frequencies in dogs.	van Dam AP, van Weert A, Harmanus C, Hovius KE, Claas EC, Reubsaet FA.	J Clin Microbiol	10.1128/jcm.01246-09	2009
Phylogeny	Characterization of three strains of Capnocytophaga canis isolated from patients with sepsis.	Suzuki M, Imaoka K, Haga Y, Mohri M, Nogami A, Shimojima Y, Irie Y, Sugimura S, Morikawa S	Microbiol Immunol	10.1111/1348-0421.12642	2018
Enzymology	Capnocytophaga canimorsus sp. nov. (formerly CDC group DF-2), a cause of septicemia following dog bite, and C. cynodegmi sp. nov., a cause of localized wound infection following dog bite.	Brenner DJ, Hollis DG, Fanning GR, Weaver RE.	J Clin Microbiol	10.1128/jcm.27.2.231-235.1989	1989

References

#8133	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19736
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#34432	; Curators of the CIP;
#48031	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 24742
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#118831	Collection of Institut Pasteur ; Curators of the CIP; CIP 103937
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Capnocytophaga cynodegmi (MCCM 00247, LMG 11513, MCCM 00265)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Enzymes

Pathway annotation

Fatty acid profile

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000379185

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media