Clostridium budayi (DSM 3981, ATCC 25541, VPI 0250)

Name: Clostridium budayi (DSM 3981, ATCC 25541, VPI 0250)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5419

Type strain

Strain Designation ECI

Culture col. no. DSM 3981 ATCC 25541 VPI 0250 ECI JCM 9989

NCBI tax ID(s) 83338

Special Collections DSMZ JCM

History <- ATCC <- L. Holdeman, VPI 0250 <- A. Prévot, ECI STAFF 1014 <-- ATCC 25541 <-- L. V. Holdeman VPI 0250 <-- A. Prévot ECI.

Links

Clostridium budayi ECI is an anaerobe bacterium that was isolated from Pond water.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 38587

ATCC 25541,DSM 3981,JCM 9989

@ref 20215

Last LPSN update 2026-02-09 11:18:57

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium budayi

Full scientific name Clostridium budayi (Le Blaye and Guggenheim 1914) Bernard et al. 2018

Synonyms (2)

Eubacterium budayi
"Bacterium budayi"

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1539	AMB MEDIUM (DSMZ Medium 455)		Medium recipe at MediaDive	Name: AMB MEDIUM (DSMZ Medium 455) Composition: Meat infusion 25.0 g/l K2HPO4 15.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Trypticase peptone 4.0 g/l Starch 1.0 g/l Cysteine 1.0 g/l (NH4)2SO4 1.0 g/l MgSO4 0.2 g/l CaCl2 0.01 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
1539	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

1539

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type
1539	Pond water
67770	Pond water

Taxonmaps

69479

Global distribution of 16S sequence LC383839 (>99% sequence identity) for Clostridium baratii from Microbeatlas

Aquatic Samples	927
Soil Samples	585
Animal Samples	10123
Plant Samples	218
Total Samples	11853

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1539	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Eubacterium budayi gene for 16S rRNA, partial sequence	AB018183	1472		83338
67770	[Eubacterium] budayi JCM 9989 gene for 16S ribosomal RNA, partial sequence	LC383839	1453		83338

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Metabolic diversity and responses of anteater clostridial isolates to chitin-based substrates.	Amin A, Modrackova N, Tejnecky V, Neuzil-Bunesova V.	Front Vet Sci	10.3389/fvets.2025.1459378	2025
Phylogeny	Clostridium neonatale sp. nov. linked to necrotizing enterocolitis in neonates and a clarification of species assignable to the genus Clostridium (Prazmowski 1880) emend. Lawson and Rainey 2016.	Bernard K, Burdz T, Wiebe D, Alfa M, Bernier AM.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002827	2018

References

#1539	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3981
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium budayi (DSM 3981, ATCC 25541, VPI 0250)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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