Name: Erythrobacter donghaensis SW-158
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5395

Type strain:

Species: Erythrobacter donghaensis

Strain Designation: SW-158

Culture col. no.: DSM 16224, KCTC 12230

Strain history: <- J.-H. Yoon, Korea Res. Inst. of Biosci. and Biotechnol. (KRIBB); SW-158 <- J.-H. Yoon et al.

NCBI tax ID(s): 267135 (species)

SI-ID 232747

KCTC 12230

Section

Erythrobacter donghaensis SW-158 is a mesophilic bacterium that was isolated from sea water of tidal flat.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Erythrobacteraceae*
	Genus	*Erythrobacter*
	Species	**Erythrobacter donghaensis**
	Full Scientific Name (LPSN)	Erythrobacter donghaensis (Yoon et al. 2004) Xu et al. 2020

Synonym

Porphyrobacter donghaensis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6339]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #6339]

Culture medium growth

[Ref.: #6339]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6339]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6339]			growth	28 °C

[Ref.: #6339]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6339]	Sample type/isolated from	sea water of tidal flat
[Ref.: #6339]	Geographic location (country and/or sea, region)	East Sea, Hwajinpo beach
[Ref.: #6339]	Country	Republic of Korea
[Ref.: #6339]	Country ISO 3 Code	KOR
[Ref.: #6339]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Tidal flat

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY559429 (>99% sequence identity) for Erythrobacter from Microbeatlas

Aquatic Samples	585
Soil Samples	38
Animal Samples	55
Plant Samples	15
Total Samples	693

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6339]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6339]	Porphyrobacter donghaensis strain SW-158 16S ribosomal RNA gene, partial sequence	AY559429	1440	ENA	267135 tax ID

Availability in culture collections External links

[Ref.: #6339]

Culture collection no.

DSM 16224, KCTC 12230

[Ref.: #74885]

SI-ID 232747

References

#6339

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16224

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#74885

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID232747.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Porphyrobacter donghaensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF