Erythrobacter litoralis T4 is an aerobe, chemoorganotroph, mesophilic prokaryote that was isolated from cyanobacterial mat.
Gram-negative motile rod-shaped aerobe chemoorganotroph mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Sphingomonadales |
| Family Erythrobacteraceae |
| Genus Erythrobacter |
| Species Erythrobacter litoralis |
| Full scientific name Erythrobacter litoralis Yurkov et al. 1994 |
| 23246 | Colony colorred to orange |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3290 | ERYTHROMICROBIUM AND ROSEOCOCCUS MEDIUM (DSMZ Medium 767) | Medium recipe at MediaDive | Name: ERYTHROMICROBIUM AND ROSEOCOCCUS MEDIUM (DSMZ Medium 767) Composition: Yeast extract 1.0 g/l Na-acetate 1.0 g/l Bacto peptone 1.0 g/l MgSO4 x 7 H2O 0.5 g/l K2HPO4 0.3 g/l NH4Cl 0.3 g/l KCl 0.3 g/l CaCl2 x 2 H2O 0.05 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l Na2MoO4 x 2 H2O 3e-05 g/l MnCl2 x 4 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l Vitamin B12 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Distilled water | ||
| 37251 | Marine agar (MA) | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |||
| 120629 | CIP Medium 13 | Medium recipe at CIP |
| 23246 | Typechemoorganotroph |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.3 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 23246 | NaCl | positive | growth | 0.5-9.6 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 23246 | 30089 ChEBI | acetate | + | growth | |
| 23246 | 17968 ChEBI | butyrate | + | growth | |
| 120629 | 4853 ChEBI | esculin | - | hydrolysis | |
| 23246 | 28757 ChEBI | fructose | + | growth | |
| 23246 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 23246 | 17234 ChEBI | glucose | + | growth | |
| 23246 | 29987 ChEBI | glutamate | + | growth | |
| 120629 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 23246 | 24996 ChEBI | lactate | + | growth | |
| 120629 | 15792 ChEBI | malonate | - | assimilation | |
| 23246 | 17790 ChEBI | methanol | - | growth | |
| 23246 | 17632 ChEBI | nitrate | - | reduction | |
| 120629 | 17632 ChEBI | nitrate | - | reduction | |
| 120629 | 17632 ChEBI | nitrate | - | respiration | |
| 120629 | 16301 ChEBI | nitrite | - | reduction | |
| 23246 | 28017 ChEBI | starch | - | hydrolysis | |
| 23246 | 30031 ChEBI | succinate | +/- | growth | |
| 23246 | 53426 ChEBI | tween 80 | + | hydrolysis |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 120629 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 120629 | amylase | - | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 120629 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 120629 | caseinase | - | 3.4.21.50 | |
| 23246 | catalase | + | 1.11.1.6 | |
| 120629 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 23246 | cytochrome oxidase | + | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 120629 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 120629 | gelatinase | +/- | ||
| 120629 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 120629 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 120629 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120629 | ornithine decarboxylase | - | 4.1.1.17 | |
| 120629 | oxidase | + | ||
| 120629 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 120629 | protease | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 120629 | tryptophan deaminase | - | ||
| 120629 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | ethylmalonyl-CoA pathway | 100 | 5 of 5 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | cyanate degradation | 100 | 3 of 3 | ||
| 66794 | C4 and CAM-carbon fixation | 100 | 8 of 8 | ||
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | taurine degradation | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | palmitate biosynthesis | 90.91 | 20 of 22 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | citric acid cycle | 85.71 | 12 of 14 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | phenylacetate degradation (aerobic) | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | tetrahydrofolate metabolism | 78.57 | 11 of 14 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | NAD metabolism | 77.78 | 14 of 18 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | glutamate and glutamine metabolism | 75 | 21 of 28 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | glutathione metabolism | 71.43 | 10 of 14 | ||
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | tryptophan metabolism | 68.42 | 26 of 38 | ||
| 66794 | purine metabolism | 68.09 | 64 of 94 | ||
| 66794 | lipid metabolism | 67.74 | 21 of 31 | ||
| 66794 | molybdenum cofactor biosynthesis | 66.67 | 6 of 9 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | flavin biosynthesis | 66.67 | 10 of 15 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | tyrosine metabolism | 64.29 | 9 of 14 | ||
| 66794 | heme metabolism | 64.29 | 9 of 14 | ||
| 66794 | pentose phosphate pathway | 63.64 | 7 of 11 | ||
| 66794 | vitamin B6 metabolism | 63.64 | 7 of 11 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | chlorophyll metabolism | 61.11 | 11 of 18 | ||
| 66794 | non-pathway related | 60.53 | 23 of 38 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | glycolysis | 58.82 | 10 of 17 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | polyamine pathway | 56.52 | 13 of 23 | ||
| 66794 | degradation of sugar alcohols | 56.25 | 9 of 16 | ||
| 66794 | lipid A biosynthesis | 55.56 | 5 of 9 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | pyrimidine metabolism | 55.56 | 25 of 45 | ||
| 66794 | histidine metabolism | 55.17 | 16 of 29 | ||
| 66794 | alanine metabolism | 55.17 | 16 of 29 | ||
| 66794 | phenol degradation | 55 | 11 of 20 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | arginine metabolism | 54.17 | 13 of 24 | ||
| 66794 | 3-phenylpropionate degradation | 53.33 | 8 of 15 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | biotin biosynthesis | 50 | 2 of 4 | ||
| 66794 | isoleucine metabolism | 50 | 4 of 8 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | androgen and estrogen metabolism | 50 | 8 of 16 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | isoprenoid biosynthesis | 50 | 13 of 26 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | aclacinomycin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | cardiolipin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | creatinine degradation | 40 | 2 of 5 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | urea cycle | 38.46 | 5 of 13 | ||
| 66794 | ketogluconate metabolism | 37.5 | 3 of 8 | ||
| 66794 | oxidative phosphorylation | 37.36 | 34 of 91 | ||
| 66794 | carotenoid biosynthesis | 36.36 | 8 of 22 | ||
| 66794 | lysine metabolism | 35.71 | 15 of 42 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | ascorbate metabolism | 31.82 | 7 of 22 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | glycine metabolism | 30 | 3 of 10 | ||
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | degradation of hexoses | 27.78 | 5 of 18 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 | ||
| 66794 | degradation of pentoses | 21.43 | 6 of 28 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Aquatic | #Marine | |
| #Environmental | #Microbial community | #Microbial mat | |
| #Host | #Microbial | #Bacteria |
Global distribution of 16S sequence AF465836 (>99% sequence identity) for Erythrobacter litoralis from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Erythrobacter litoralis strain DSM 8509 | complete | 39960 | 99.3 | ||||
| 66792 | ASM171916v1 assembly for Erythrobacter litoralis DSM 8509 | complete | 39960 | 95.02 | ||||
| 66792 | Ery_DSM 8509_v1 assembly for Erythrobacter litoralis DSM 8509 | contig | 39960 | 71.13 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 23246 | 67 | thermal denaturation, midpoint method (Tm) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 95.30 | no |
| 125439 | motility | BacteriaNetⓘ | no | 56.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.90 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.30 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 95.55 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 86.77 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 89.29 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.02 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 57.45 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Pathogenicity | Proteomic Analysis of Marine Bacteriophages: Structural Conservation, Post-Translational Modifications, and Phage-Host Interactions. | Wei S, Wang A, Cai L, Ma R, Lu L, Li J, Zhang R. | Environ Microbiol | 10.1111/1462-2920.70099 | 2025 | |
| A novel roseosiphovirus infecting dinoroseobacter shibae DFL12T represents a new genus. | Wei N, Lu L, Li Y, Ding B, Cai L, Yang Y. | BMC Genomics | 10.1186/s12864-025-11274-w | 2025 | ||
| Phylogeny | Isolation and characterization of a roseophage representing a novel genus in the N4-like Rhodovirinae subfamily distributed in estuarine waters. | Huang X, Yu C, Lu L. | BMC Genomics | 10.1186/s12864-025-11463-7 | 2025 | |
| Variations in kinase and effector signaling logic in a bacterial two component signaling network. | Swingle D, Epstein L, Aymon R, Isiorho EA, Abzalimov RR, Favaro DC, Gardner KH. | J Biol Chem | 10.1016/j.jbc.2025.108534 | 2025 | ||
| Enzymology | Biochemical and genetic characterization of a novel metallo-beta-lactamase from marine bacterium Erythrobacter litoralis HTCC 2594. | Jiang XW, Cheng H, Huo YY, Xu L, Wu YH, Liu WH, Tao FF, Cui XJ, Zheng BW. | Sci Rep | 10.1038/s41598-018-19279-0 | 2018 | |
| Genetics | A Comparison of 14 Erythrobacter Genomes Provides Insights into the Genomic Divergence and Scattered Distribution of Phototrophs. | Zheng Q, Lin W, Liu Y, Chen C, Jiao N. | Front Microbiol | 10.3389/fmicb.2016.00984 | 2016 | |
| Enzymology | Complex Evolution of Light-Dependent Protochlorophyllide Oxidoreductases in Aerobic Anoxygenic Phototrophs: Origin, Phylogeny, and Function. | Chernomor O, Peters L, Schneidewind J, Loeschcke A, Knieps-Grunhagen E, Schmitz F, von Lieres E, Kutta RJ, Svensson V, Jaeger KE, Drepper T, von Haeseler A, Krauss U. | Mol Biol Evol | 10.1093/molbev/msaa234 | 2021 | |
| A Virus Infecting Marine Photoheterotrophic Alphaproteobacteria (Citromicrobium spp.) Defines a New Lineage of ssDNA Viruses. | Zheng Q, Chen Q, Xu Y, Suttle CA, Jiao N. | Front Microbiol | 10.3389/fmicb.2018.01418 | 2018 | ||
| Genetics | Osmotic Adaptation and Compatible Solute Biosynthesis of Phototrophic Bacteria as Revealed from Genome Analyses. | Imhoff JF, Rahn T, Kunzel S, Keller A, Neulinger SC. | Microorganisms | 10.3390/microorganisms9010046 | 2020 | |
| Oxidative stress and starvation in Dinoroseobacter shibae: the role of extrachromosomal elements. | Soora M, Tomasch J, Wang H, Michael V, Petersen J, Engelen B, Wagner-Dobler I, Cypionka H. | Front Microbiol | 10.3389/fmicb.2015.00233 | 2015 | ||
| Enzymology | Roseophage RDJL Phi1, infecting the aerobic anoxygenic phototrophic bacterium Roseobacter denitrificans OCh114. | Zhang Y, Jiao N. | Appl Environ Microbiol | 10.1128/aem.02131-08 | 2009 | |
| The First Cbk-Like Phage Infecting Erythrobacter, Representing a Novel Siphoviral Genus. | Li X, Guo R, Zou X, Yao Y, Lu L | Front Microbiol | 10.3389/fmicb.2022.861793 | 2022 | ||
| Metabolism | Regulation of the Erythrobacter litoralis DSM 8509 general stress response by visible light. | Fiebig A, Varesio LM, Alejandro Navarreto X, Crosson S | Mol Microbiol | 10.1111/mmi.14310 | 2019 | |
| Metabolism | Shining light on the alphaproteobacterial general stress response: Comment on: Fiebig et al., Mol Microbiol, 2019. | Dikiy I, Gardner KH | Mol Microbiol | 10.1111/mmi.14311 | 2019 | |
| Phylogeny | Isolation and characterization of the first phage infecting ecologically important marine bacteria Erythrobacter. | Lu L, Cai L, Jiao N, Zhang R | Virol J | 10.1186/s12985-017-0773-x | 2017 | |
| Genetics | Draft Genome Sequences of Two Marine Phototrophic Bacteria, Erythrobacter longus Strain DSM 6997 and Erythrobacter litoralis Strain DSM 8509. | Wang Y, Zhang R, Zheng Q, Jiao N | Genome Announc | 10.1128/genomeA.00677-14 | 2014 | |
| Genetics | Erythrobacter aurantius sp. nov., isolated from intertidal seawater in Taizhou. | Zhang Y, Hua J, Ying JJ, Dong H, Li H, Xamxidin M, Han BN, Sun C, Xu L. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005616 | 2022 | |
| Phylogeny | Erythrobacter westpacificensis sp. nov., a marine bacterium isolated from the Western Pacific. | Wei J, Mao Y, Zheng Q, Zhang R, Wang YN, Jiao N | Curr Microbiol | 10.1007/s00284-012-0287-0 | 2012 | |
| Phylogeny | Erythrobacter gangjinensis sp. nov., a marine bacterium isolated from seawater. | Lee YS, Lee DH, Kahng HY, Kim EM, Jung JS | Int J Syst Evol Microbiol | 10.1099/ijs.0.015743-0 | 2009 | |
| Phylogeny | Erythrobacter citreus sp. nov., a yellow-pigmented bacterium that lacks bacteriochlorophyll a, isolated from the western Mediterranean Sea. | Denner EBM, Vybiral D, Koblizek M, Kampfer P, Busse HJ, Velimirov B | Int J Syst Evol Microbiol | 10.1099/00207713-52-5-1655 | 2002 |
| #3290 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 8509 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23246 | VLADIMIR YURKOV, ERKO STACKEBRANDT, ANDREW HOLMES, JOHN A. FUERST, P. HUGENHOLTZ, JOCHEN GOLECKI, NASSER GAD'ON, VLADIMIR M. GORLENKO, ELENA I. KOMPANTSEVA, GERHART DREWS: Phylogenetic Positions of Novel Aerobic, Bacteriochlorophyll a-Containing Bacteria and Description of Roseococcus thiosulfatophilus gen. nov., sp. nov., Erythromicrobium ramosum gen. nov., sp. nov., and Erythrobacter litoralis sp. nov.. IJSEM 44: 427 - 434 1994 ( DOI 10.1099/00207713-44-3-427 , PubMed 7520734 ) |
| #37251 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120629 | Collection of Institut Pasteur ; Curators of the CIP; CIP 106926 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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