Name: Enterococcus termitis C.J. Portricus UAD1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5350

Type strain:

Species: Enterococcus termitis

Strain Designation: C.J. Portricus UAD1, UAD1

Culture col. no.: CCM 7300, DSM 22803, CCUG 53831, CIP 109180, LMG 8895

Strain history: CIP <- 2006, CCM <- 2005, LMG, Lactococus lactis subsp. lactis <- NCFB <- C.J. Portricus: strain UAD1

NCBI tax ID(s): 332950 (species)

SI-ID 3433

LMG 8895, CCM 7300, CCUG 53831, CIP 109180

Section

Enterococcus termitis C.J. Portricus UAD1 is a microaerophile, spore-forming, mesophilic bacterium that was isolated from gut of a termite.

Gram-positive
ovoid-shaped
spore-forming
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Enterococcaceae*
	Genus	*Enterococcus*
	Species	**Enterococcus termitis**
	Full Scientific Name (LPSN)	Enterococcus termitis Švec et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #31631]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #31631]	Cell shape	ovoid-shaped

[Ref.: #31631]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %93.108

[Ref.: #31631]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16523]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #16523]

Culture medium growth

[Ref.: #16523]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16523]

Culture medium composition

expand / minimize

[Ref.: #37468]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #37468]

Culture medium growth

[Ref.: #37468]

Culture medium composition

expand / minimize

[Ref.: #123446]

Culture medium

CIP Medium 29

[Ref.: #123446]

Culture medium growth

[Ref.: #123446]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #16523]	growth	37 °C
[Ref.: #31631]	growth	10-45 °C
[Ref.: #31631]	optimum	30-45 °C
[Ref.: #37468]	growth	37 °C
[Ref.: #60029]	growth	37 °C

[Ref.: #16523]	Temperature range	mesophilic
[Ref.: #37468]	Temperature range	mesophilic
[Ref.: #60029]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31631]			optimum	7
[Ref.: #31631]			growth	7-9.6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #16523]	Oxygen tolerance	microaerophile
[Ref.: #31631]	Oxygen tolerance	aerobe
[Ref.: #60029]	Oxygen tolerance	microaerophile

[Ref.: #31631]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.936

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31631]		NaCl		growth	6.5	%
[Ref.: #31631]		NaCl		optimum	6.5	%

[Ref.: #31631]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #31631]	cellobiose ChEBI	+	carbon source
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #31631]	esculin ChEBI	+	hydrolysis
[Ref.: #31631]	fructose ChEBI	+	carbon source
[Ref.: #31631]	galactose ChEBI	+	carbon source
[Ref.: #31631]	gluconate ChEBI	+	carbon source
[Ref.: #31631]	glucose ChEBI	+	carbon source
[Ref.: #31631]	glycerol ChEBI	+	carbon source
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	hippurate ChEBI	+	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #31631]	lactose ChEBI	+	carbon source
[Ref.: #68381]	lactose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #31631]	maltose ChEBI	+	carbon source
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #31631]	mannose ChEBI	+	carbon source
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #31631]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #31631]	ribose ChEBI	+	carbon source
[Ref.: #31631]	salicin ChEBI	+	carbon source
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sucrose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #31631]	trehalose ChEBI	+	carbon source
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #31631]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68381]		acetoin ChEBI	no	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68381]		acetoin ChEBI	-	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	-		* from API rID32STR
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR
[Ref.: #68381]	alpha-galactosidase	-	3.2.1.22	* from API rID32STR
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-galactosidase	-	3.2.1.23	* from API rID32STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR
[Ref.: #68381]	beta-mannosidase	+	3.2.1.25	* from API rID32STR
[Ref.: #16523]	catalase	-	1.11.1.6
[Ref.: #16523]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68381]	glycyl tryptophan arylamidase	+		* from API rID32STR
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #16523]	10542	-	+	+	-	-	-	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16523]	Sample type/isolated from	gut of a termite

[Ref.: #60029]	Sample type/isolated from	Termite gut

[Ref.: #123446]	Sample type/isolated from	Animal, Termite, gut
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16523]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123446]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16523]	Enterococcus termitis 16S rRNA gene, strain type strain: LMG 8895T	AM039968	1512	ENA	332950 tax ID
[Ref.: #16523]	Enterococcus termitis strain DSM 22803, whole genome shotgun sequencing project	JXLF00000000	102	ENA	332950 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Enterococcus termitis DSM 22803	GCA_001886275	scaffold	GenBank	332950 tax ID	*
[Ref.: #66792]	Enterococcus termitis LMG 8895	GCA_001730305	contig	GenBank	332950 tax ID	*
[Ref.: #66792]	Enterococcus termitis strain DSM 22803	332950.4	wgs	PATRIC	332950 tax ID	*
[Ref.: #66792]	Enterococcus termitis strain LMG 8895	332950.6	wgs	PATRIC	332950 tax ID	*
[Ref.: #66792]	Enterococcus termitis LMG 8895	2916559209	draft	JGI IMG/M	332950 tax ID	*

[Ref.: #16523]

GC-content

37.1 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Enterococcus termitis DSM 22803 NCBI: GCA_001886275.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Enterococcus termitis DSM 22803 NCBI: GCA_001886275.1
[Ref.: #69480]	flagellated	no	97.578	yes
[Ref.: #69480]	gram-positive	yes	92.663	yes
[Ref.: #69480]	anaerobic	no	93.89	yes
[Ref.: #69480]	aerobic	no	93.837	no
[Ref.: #69480]	halophile	yes	79.675	yes
[Ref.: #69480]	spore-forming	no	79.879	yes
[Ref.: #69480]	glucose-util	yes	86.619	yes
[Ref.: #69480]	thermophile	no	99.328	yes
[Ref.: #69480]	motile	no	93.857	yes
[Ref.: #69480]	glucose-ferment	yes	81.259	no

Availability in culture collections External links

[Ref.: #16523]

Culture collection no.

CCM 7300, DSM 22803, CCUG 53831, CIP 109180, LMG 8895

[Ref.: #74839]

SI-ID 3433

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Vagococcus humatus sp. nov., isolated from soil beneath a decomposing pig carcass.	Sundararaman A, Srinivasan S, Lee SS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001625	2017	*
Phylogeny	Enterococcus silesiacus sp. nov. and Enterococcus termitis sp. nov.	Svec P, Vancanneyt M, Sedlacek I, Naser SM, Snauwaert C, Lefebvre K, Hoste B, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.63937-0	2006	*

References

#16523

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22803

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31631

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27915 (see below)

#37468 ; Curators of the CIP;
#60029 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53831

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68381

Automatically annotated from API rID32STR .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74839

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3433.1 )

#123446 Collection of Institut Pasteur ; Curators of the CIP; CIP 109180

#27915

IJSEM 577 2006 ( DOI 10.1099/ijs.0.63937-0 , PubMed 16514030 )

* These data were automatically processed and therefore are not curated

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Enterococcus termitis DSM 22803

Enterococcus termitis DSM 22803

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