Enterococcus sulfureus CCUG 30571 is a microaerophile, mesophilic, Gram-positive prokaryote that was isolated from plant material.
Gram-positive ovoid-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Enterococcaceae |
| Genus Enterococcus |
| Species Enterococcus sulfureus |
| Full scientific name Enterococcus sulfureus Martínez-Murcia and Collins 1991 |
| BacDive ID | Other strains from Enterococcus sulfureus (1) | Type strain |
|---|---|---|
| 147295 | E. sulfureus |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2884 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 2884 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 34691 | MEDIUM 29- Brain heart agar | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | |||
| 123384 | CIP Medium 29 | Medium recipe at CIP |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 2884 | A11.05 | A3alpha L-Lys-L-Ala2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | + | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68381 | 6731 ChEBI | melezitose | + | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | + | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | + | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | + | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 123384 | 17632 ChEBI | nitrate | - | reduction | |
| 123384 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | + | builds acid from | from API 50CH acid | |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | + | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | + | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68381 | alpha-galactosidase | + | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68381 | beta-glucosidase | + | 3.2.1.21 | from API rID32STR |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 2884 | catalase | + | 1.11.1.6 | |
| 123384 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 2884 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68381 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API rID32STR |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 123384 | oxidase | - | ||
| 68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32STR |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 123384 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | pentose phosphate pathway | 100 | 11 of 11 | ||
| 66794 | ribulose monophosphate pathway | 100 | 2 of 2 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | starch degradation | 80 | 8 of 10 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | purine metabolism | 77.66 | 73 of 94 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | pyrimidine metabolism | 75.56 | 34 of 45 | ||
| 66794 | ppGpp biosynthesis | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | flavin biosynthesis | 73.33 | 11 of 15 | ||
| 66794 | glutamate and glutamine metabolism | 71.43 | 20 of 28 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | ||
| 66794 | enterobactin biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | NAD metabolism | 66.67 | 12 of 18 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | ||
| 66794 | photosynthesis | 64.29 | 9 of 14 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | isoleucine metabolism | 62.5 | 5 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | alanine metabolism | 62.07 | 18 of 29 | ||
| 66794 | 3-chlorocatechol degradation | 60 | 3 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 58.33 | 7 of 12 | ||
| 66794 | oxidative phosphorylation | 58.24 | 53 of 91 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | tryptophan metabolism | 57.89 | 22 of 38 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | heme metabolism | 57.14 | 8 of 14 | ||
| 66794 | lysine metabolism | 57.14 | 24 of 42 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | polyamine pathway | 56.52 | 13 of 23 | ||
| 66794 | CO2 fixation in Crenarchaeota | 55.56 | 5 of 9 | ||
| 66794 | arginine metabolism | 54.17 | 13 of 24 | ||
| 66794 | glycolysis | 52.94 | 9 of 17 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 50 | 4 of 8 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | tetrahydrofolate metabolism | 50 | 7 of 14 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | degradation of sugar alcohols | 50 | 8 of 16 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | lipid metabolism | 48.39 | 15 of 31 | ||
| 66794 | leucine metabolism | 46.15 | 6 of 13 | ||
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | ||
| 66794 | proline metabolism | 45.45 | 5 of 11 | ||
| 66794 | cysteine metabolism | 44.44 | 8 of 18 | ||
| 66794 | citric acid cycle | 42.86 | 6 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | ubiquinone biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | glutathione metabolism | 42.86 | 6 of 14 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | cellulose degradation | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | methylglyoxal degradation | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | degradation of pentoses | 39.29 | 11 of 28 | ||
| 66794 | urea cycle | 38.46 | 5 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | vitamin B6 metabolism | 36.36 | 4 of 11 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | L-lactaldehyde degradation | 33.33 | 1 of 3 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | degradation of sugar acids | 32 | 8 of 25 | ||
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | ||
| 66794 | tyrosine metabolism | 28.57 | 4 of 14 | ||
| 66794 | arachidonic acid metabolism | 27.78 | 5 of 18 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | metabolism of disaccharids | 27.27 | 3 of 11 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | ascorbate metabolism | 27.27 | 6 of 22 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | sulfate reduction | 23.08 | 3 of 13 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123384 | not determinedn.d. | +/- | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | + | + | + | + | - | + | + | + | - | - | + | + | - | - | - | - | - | - | + | + | +/- |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50159 | - | + | + | - | + | - | + | - | - | + | + | - | + | - | - | + | + | - | + | + | + | - | - | - | - | + | + | + | + | - | - | - | |
| 2884 | - | + | + | - | + | - | + | - | - | + | + | + | + | - | - | + | + | - | + | + | + | + | - | - | - | + | + | + | + | - | + | - | |
| 2884 | - | + | + | - | + | + | + | - | - | + | + | + | + | - | - | + | + | - | + | + | + | + | - | - | - | + | + | + | + | - | + | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Ente_sulf_ATCC49903_V2 assembly for Enterococcus sulfureus ATCC 49903 | contig | 1140003 | 75.98 | ||||
| 66792 | Ente_sulf_ATCC49903_V1 assembly for Enterococcus sulfureus ATCC 49903 | scaffold | 1140003 | 73.38 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Enterococcus sulfureus strain ATCC 49903 16S ribosomal RNA gene, partial sequence | DQ411815 | 1479 | 1140003 | ||
| 2884 | Enterococcus sulfureus 16S ribosomal RNA gene, partial sequence | AF061001 | 1498 | 1140003 | ||
| 124043 | Enterococcus sulfureus ATCC 49903 strain T175 16S ribosomal RNA gene, partial sequence. | OR122010 | 1498 | 1140003 | ||
| 124043 | E.sulfureus 16S ribosomal RNA | X55133 | 1495 | 1356 | ||
| 124043 | E.sulfureus 16S rRNA gene, partial (strain CCUG 33313 ) | Y12921 | 366 | 1356 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 2884 | 38.0 | thermal denaturation, midpoint method (Tm) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 91.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 69.40 | no |
| 125439 | motility | BacteriaNetⓘ | no | 58.20 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 51.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.28 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.74 | no |
| 125438 | aerobic | aerobicⓘ | no | 92.18 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 74.60 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.79 | no |
| 125438 | flagellated | motile2+ⓘ | no | 87.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Antibiotics-induced dysbiosis impacts dendritic morphology of adult mouse cortical interneurons. | Nakhal MM, Mydeen AB, Yassin LK, Almazrouei R, Alkamali R, Alsulaimi M, Elsaleh RI, BaniYas S, Al Houqani S, Al-Marzooq F, Hassane M, Voitetskii R, Statsenko Y, Allam M, Akour A, Hamad MIK. | Front Neuroanat | 10.3389/fnana.2025.1557961 | 2025 | ||
| Pathogenic Potential and Antibiotic Susceptibility: A Comprehensive Study of Enterococci from Different Ecological Settings. | Pandova M, Kizheva Y, Tsenova M, Rusinova M, Borisova T, Hristova P. | Pathogens | 10.3390/pathogens13010036 | 2023 | ||
| Development and diversity of lactic acid producing bacteria and bifidobacteria in healthy full term Indian infants from Himachal Pradesh. | Attri S, Mahajan R, Goel G. | Intest Res | 10.5217/ir.2018.00050 | 2018 | ||
| Metabolism | Changes in the bacterial community and composition of fermentation products during ensiling of wilted Italian ryegrass and wilted guinea grass silages. | Li Y, Nishino N. | Anim Sci J | 10.1111/asj.12046 | 2013 | |
| Redundant potassium transporter systems guarantee the survival of Enterococcus faecalis under stress conditions. | Acciarri G, Gizzi FO, Torres Manno MA, Stulke J, Espariz M, Blancato VS, Magni C. | Front Microbiol | 10.3389/fmicb.2023.1117684 | 2023 | ||
| Genetics | Global diversity of enterococci and description of 18 previously unknown species. | Schwartzman JA, Lebreton F, Salamzade R, Shea T, Martin MJ, Schaufler K, Urhan A, Abeel T, Camargo ILBC, Sgardioli BF, Prichula J, Guedes Frazzon AP, Giribet G, Van Tyne D, Treinish G, Innis CJ, Wagenaar JA, Whipple RM, Manson AL, Earl AM, Gilmore MS. | Proc Natl Acad Sci U S A | 10.1073/pnas.2310852121 | 2024 | |
| Bathing Water Quality Monitoring Practices in Europe and the United States. | Tiwari A, Oliver DM, Bivins A, Sherchan SP, Pitkanen T. | Int J Environ Res Public Health | 10.3390/ijerph18115513 | 2021 | ||
| Identification of enterococcal isolates by temperature gradient gel electrophoresis and partial sequence analysis of PCR-amplified 16S rDNA variable V6 regions. | Monstein HJ, Ahrne S, Molin G, Nikpour-Badr S, Jonasson J. | APMIS | 10.1034/j.1600-0463.2001.090304.x | 2001 | ||
| Metabolism | Dynamics of Bacterial Community and Fermentation Quality during Ensiling of Wilted and Unwilted Moringa oleifera Leaf Silage with or without Lactic Acid Bacterial Inoculants. | Wang Y, He L, Xing Y, Zheng Y, Zhou W, Pian R, Yang F, Chen X, Zhang Q. | mSphere | 10.1128/msphere.00341-19 | 2019 | |
| Categorical performance characteristics of method ISO 7899-2 and indicator value of intestinal enterococci for bathing water quality monitoring. | Tiwari A, Hokajarvi AM, Santo Domingo JW, Kauppinen A, Elk M, Ryu H, Jayaprakash B, Pitkanen T. | J Water Health | 10.2166/wh.2018.293 | 2018 | ||
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| A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters. | Kolm C, Martzy R, Brunner K, Mach RL, Krska R, Heinze G, Sommer R, Reischer GH, Farnleitner AH. | Environ Sci Technol | 10.1021/acs.est.7b01074 | 2017 | ||
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| Phylogeny | Molecular analysis of artisanal Italian cheeses reveals Enterococcus italicus sp. nov. | Fortina MG, Ricci G, Mora D, Manachini PL. | Int J Syst Evol Microbiol | 10.1099/ijs.0.63190-0 | 2004 | |
| Phylogeny | Enterococcus saccharominimus sp. nov., from dairy products. | Vancanneyt M, Zamfir M, Devriese LA, Lefebvre K, Engelbeen K, Vandemeulebroecke K, Amar M, De Vuyst L, Haesebrouck F, Swings J. | Int J Syst Evol Microbiol | 10.1099/ijs.0.63193-0 | 2004 | |
| Enzymology | Enterococcus Xinjiangensis sp. nov., Isolated from Yogurt of Xinjiang, China. | Ren X, Li M, Guo D. | Curr Microbiol | 10.1007/s00284-016-1065-1 | 2016 | |
| Phylogeny | Enterococcus bulliens sp. nov., a novel lactic acid bacterium isolated from camel milk. | Kadri Z, Spitaels F, Cnockaert M, Praet J, El Farricha O, Swings J, Vandamme P | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0579-z | 2015 |
| #2884 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6905 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34691 | ; Curators of the CIP; |
| #50159 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30571 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68371 | Automatically annotated from API 50CH acid . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #123384 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104373 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive5327.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data