Enterococcus durans 98 D is a microaerophile, mesophilic, Gram-positive human pathogen that was isolated from dried milk.
Gram-positive coccus-shaped microaerophile mesophilic human pathogen genome sequence 16S sequence| @ref 20215 |
|
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| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Enterococcaceae |
| Genus Enterococcus |
| Species Enterococcus durans |
| Full scientific name Enterococcus durans (ex Sherman and Wing 1937) Collins et al. 1984 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8979 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8979 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 37696 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 118979 | CIP Medium 6 | Medium recipe at CIP |
| 118979 | Spore formationno |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 118979 | NaCl | positive | growth | 6.5 % |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8979 | A11.31 | A4alpha L-Lys-D-Asp |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 118979 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 118979 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | + | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 118979 | 17632 ChEBI | nitrate | - | reduction | |
| 118979 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68381 | 17992 ChEBI | sucrose | - | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 118979 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | + | 3.5.3.6 | from API rID32STR |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 118979 | beta-galactosidase | + | 3.2.1.23 | |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68381 | beta-glucosidase | + | 3.2.1.21 | from API rID32STR |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68381 | beta-mannosidase | + | 3.2.1.25 | from API rID32STR |
| 8979 | catalase | + | 1.11.1.6 | |
| 118979 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 8979 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 118979 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 118979 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 118979 | ornithine decarboxylase | - | 4.1.1.17 | |
| 118979 | oxidase | - | ||
| 68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32STR |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118979 | not determinedn.d. | +/- | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | - | - | - | - | +/- | +/- | - | - | + | +/- | - | - | - | - | - | - | - | - | +/- |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8979 | + | + | + | - | - | - | + | - | - | + | - | - | - | - | - | - | + | - | + | + | - | + | - | - | - | + | - | - | + | - | + | - | |
| 8979 | + | + | + | - | + | - | + | - | - | + | - | - | - | - | - | - | + | - | + | + | - | + | - | - | - | + | - | - | + | - | + | - | |
| 8979 | + | + | + | - | + | - | + | - | - | + | - | - | - | - | - | - | + | +/- | + | + | - | + | - | - | - | + | - | - | + | - | + | - | |
| 8979 | + | + | +/- | - | + | - | + | - | - | + | - | - | - | - | - | - | + | - | + | + | - | - | - | - | - | + | - | - | + | - | + | - |
Global distribution of 16S sequence LC096214 (>99% sequence identity) for Enterococcus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1904832v1 assembly for Enterococcus durans FDAARGOS 1437 | complete | 53345 | 93.07 | ||||
| 66792 | ASM154421v1 assembly for Enterococcus durans NBRC 100479 = LMG 10746 | contig | 1218088 | 54.03 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Enterococcus durans strain ATCC 19432 16S ribosomal RNA gene, partial sequence | KC510230 | 815 | 53345 | ||
| 20218 | E.durans 16S-23S rRNA spacer DNA & tRNA-Ala gene | X87177 | 330 | 53345 | ||
| 20218 | E.durans 16S-23S rRNA spacer DNA | X87178 | 277 | 53345 | ||
| 20218 | E.durans 16S rRNA gene, partial (strain ATTC 19432 (CCUG 7972)) | Y12909 | 366 | 53345 | ||
| 8979 | Enterococcus durans 16S rRNA gene, strain DSM20633 | AJ276354 | 1534 | 53345 | ||
| 67770 | Enterococcus durans gene for 16S rRNA, partial sequence, strain: JCM 8725 | AB596943 | 1482 | 53345 | ||
| 67770 | Enterococcus durans 16S rRNA gene, strain CECT411T | AJ420801 | 1506 | 53345 | ||
| 67770 | Enterococcus durans gene for 16S ribosomal RNA, partial sequence, strain: JCM 8725 | LC096214 | 1502 | 53345 | ||
| 67770 | Enterococcus durans 16S rRNA gene | Y18359 | 1434 | 53345 | ||
| 124043 | Enterococcus durans gene for 16S rRNA, partial sequence, strain: NBRC 100479. | AB681177 | 1485 | 53345 | ||
| 124043 | Enterococcus durans strain JCM 8725 16S ribosomal RNA gene, partial sequence. | MN526999 | 509 | 53345 | ||
| 124043 | Enterococcus durans strain JCM 8725 16S ribosomal RNA gene, partial sequence. | MN527283 | 509 | 53345 | ||
| 124043 | Enterococcus durans strain JCM 8725 16S ribosomal RNA gene, partial sequence. | OK137545 | 700 | 53345 | ||
| 124043 | Enterococcus durans strain NBRC 100479 16S ribosomal RNA gene, partial sequence. | OQ128114 | 906 | 53345 | ||
| 124043 | Enterococcus durans strain ATCC 19432 16S ribosomal RNA gene, partial sequence. | MT729971 | 1292 | 53345 | ||
| 124043 | Enterococcus durans strain ATCC 19432 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence. | MK330566 | 4366 | 53345 | ||
| 124043 | Enterococcus durans strain ATCC 19432 16S ribosomal RNA gene, partial sequence. | MK330524 | 1292 | 53345 | ||
| 124043 | Enterococcus durans strain JCM 8725 YGC 16S ribosomal RNA gene, partial sequence. | PQ301226 | 1096 | 53345 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 90.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 69.40 | no |
| 125439 | motility | BacteriaNetⓘ | no | 51.10 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 50.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 92.76 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 90.69 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 76.69 | no |
| 125438 | aerobic | aerobicⓘ | no | 96.03 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 96.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 88.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Photoprotection Against UV-Induced Skin Damage Using Hyaluronic Acid Produced by Lactiplantibacillus plantarum and Enterococcus durans. | Shaheen AE, Gebreel HM, Moussa LA, Zakaria AE, Nemr WA. | Curr Microbiol | 10.1007/s00284-023-03377-y | 2023 | ||
| Indigenous Lactic Acid Bacteria Isolated from Raw Graviera Cheese and Evaluation of Their Most Important Technological Properties. | Psomas E, Sakaridis I, Boukouvala E, Karatzia MA, Ekateriniadou LV, Samouris G. | Foods | 10.3390/foods12020370 | 2023 | ||
| Specificity of the AMP-6000 Method for Enumerating Clostridium Endospores in Milk. | Burtscher J, Rudavsky T, Zitz U, Domig KJ. | Foods | 10.3390/foods13081192 | 2024 | ||
| Metabolism | Quorum-sensing regulation of constitutive plantaricin by Lactobacillus plantarum strains under a model system for vegetables and fruits. | Rizzello CG, Filannino P, Di Cagno R, Calasso M, Gobbetti M. | Appl Environ Microbiol | 10.1128/aem.03224-13 | 2014 | |
| Metabolism | Ethylphenol Formation by Lactobacillus plantarum: Identification of the Enzyme Involved in the Reduction of Vinylphenols. | Santamaria L, Reveron I, de Felipe FL, de Las Rivas B, Munoz R. | Appl Environ Microbiol | 10.1128/aem.01064-18 | 2018 | |
| Metabolism | Lactic acid fermentation as a tool to enhance the functional features of Echinacea spp. | Rizzello CG, Coda R, Macias DS, Pinto D, Marzani B, Filannino P, Giuliani G, Paradiso VM, Di Cagno R, Gobbetti M. | Microb Cell Fact | 10.1186/1475-2859-12-44 | 2013 | |
| Metabolism | Hydrolytic fate of deoxynivalenol-3-glucoside during digestion. | Berthiller F, Krska R, Domig KJ, Kneifel W, Juge N, Schuhmacher R, Adam G. | Toxicol Lett | 10.1016/j.toxlet.2011.08.006 | 2011 | |
| Metabolism | Unravelling the Reduction Pathway as an Alternative Metabolic Route to Hydroxycinnamate Decarboxylation in Lactobacillus plantarum. | Santamaria L, Reveron I, Lopez de Felipe F, de Las Rivas B, Munoz R. | Appl Environ Microbiol | 10.1128/aem.01123-18 | 2018 | |
| Metabolism | Duodenal and faecal microbiota of celiac children: molecular, phenotype and metabolome characterization. | Di Cagno R, De Angelis M, De Pasquale I, Ndagijimana M, Vernocchi P, Ricciuti P, Gagliardi F, Laghi L, Crecchio C, Guerzoni ME, Gobbetti M, Francavilla R. | BMC Microbiol | 10.1186/1471-2180-11-219 | 2011 | |
| A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters. | Kolm C, Martzy R, Brunner K, Mach RL, Krska R, Heinze G, Sommer R, Reischer GH, Farnleitner AH. | Environ Sci Technol | 10.1021/acs.est.7b01074 | 2017 | ||
| Metabolism | Purification and characterisation of the extracellular cholesterol oxidase enzyme from Enterococcus hirae. | Yehia HM, Hassanein WA, Ibraheim SM. | BMC Microbiol | 10.1186/s12866-015-0517-2 | 2015 | |
| Phylogeny | Different fecal microbiotas and volatile organic compounds in treated and untreated children with celiac disease. | Di Cagno R, Rizzello CG, Gagliardi F, Ricciuti P, Ndagijimana M, Francavilla R, Guerzoni ME, Crecchio C, Gobbetti M, De Angelis M. | Appl Environ Microbiol | 10.1128/aem.02793-08 | 2009 | |
| Stimulation of monokine production by lipoteichoic acids. | Bhakdi S, Klonisch T, Nuber P, Fischer W. | Infect Immun | 10.1128/iai.59.12.4614-4620.1991 | 1991 | ||
| Slovak Local Ewe's Milk Lump Cheese, a Source of Beneficial Enterococcus durans Strain. | Laukova A, Tomaska M, Kmet V, Strompfova V, Pogany Simonova M, Dvoroznakova E. | Foods | 10.3390/foods10123091 | 2021 | ||
| Characterization of Enterococcus species in surface drinking water from Akoko Edo Nigeria reveals contamination levels and risks to public health. | Isokpehi NA, Beshiru A, Green E, Igbinosa IH, Ogofure AG, Igbinosa EO. | Sci Rep | 10.1038/s41598-025-13068-2 | 2025 | ||
| Development of a Colloidal Gold-Based Immunochromatographic Strip for Rapid Detection of Klebsiella pneumoniae Serotypes K1 and K2. | Siu LK, Tsai YK, Lin JC, Chen TL, Fung CP, Chang FY. | J Clin Microbiol | 10.1128/jcm.01608-16 | 2016 | ||
| Multicenter Performance Evaluation of the Simplexa Bordetella Direct Kit in Nasopharyngeal Swab Specimens. | Chow SK, Arbefeville S, Boyanton BL, Dault EM, Dunn J, Ferrieri P, Greene W, Pence MA, Otiso J, Richter S, Schutzbank TE. | J Clin Microbiol | 10.1128/jcm.01041-20 | 2020 | ||
| Pathogenicity | Detection of the van alphabet and identification of enterococci and staphylococci at the species level by multiplex PCR. | Depardieu F, Perichon B, Courvalin P. | J Clin Microbiol | 10.1128/jcm.42.12.5857-5860.2004 | 2004 | |
| Diversity of domain V of 23S rRNA gene sequence in different Enterococcus species. | Tsiodras S, Gold HS, Coakley EP, Wennersten C, Moellering RC, Eliopoulos GM. | J Clin Microbiol | 10.1128/jcm.38.11.3991-3993.2000 | 2000 | ||
| Enzymology | The Validation of the Sample6 DETECTTM HT/L for AOAC Research Institute. | Banerjee K, Peirson B, Hu C, Carrier E, Malsick L, Tarasova Y, Daudenarde S, Brownell D, Koeris M, Klass N, Bird P, Benzinger MJ, Agin J, Goins D. | J AOAC Int | 10.5740/jaoacint.17-0484 | 2018 | |
| Enzymology | Antibiotic susceptibilities of enterococcus species isolated from hospital and domestic wastewater effluents in alice, eastern cape province of South Africa. | Iweriebor BC, Gaqavu S, Obi LC, Nwodo UU, Okoh AI. | Int J Environ Res Public Health | 10.3390/ijerph120404231 | 2015 | |
| Phylogeny | Sequencing the gene encoding manganese-dependent superoxide dismutase for rapid species identification of enterococci. | Poyart C, Quesnes G, Trieu-Cuot P. | J Clin Microbiol | 10.1128/jcm.38.1.415-418.2000 | 2000 | |
| Enzymology | Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species. | Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.42.8.3686-3695.2004 | 2004 | |
| Phylogeny | Species identification of enterococci via intergenic ribosomal PCR. | Tyrrell GJ, Bethune RN, Willey B, Low DE. | J Clin Microbiol | 10.1128/jcm.35.5.1054-1060.1997 | 1997 | |
| Phylogeny | Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences. | Goh SH, Facklam RR, Chang M, Hill JE, Tyrrell GJ, Burns EC, Chan D, He C, Rahim T, Shaw C, Hemmingsen SM. | J Clin Microbiol | 10.1128/jcm.38.11.3953-3959.2000 | 2000 | |
| Phylogeny | Identification of clinically relevant viridans streptococci by an oligonucleotide array. | Chen CC, Teng LJ, Kaiung S, Chang TC. | J Clin Microbiol | 10.1128/jcm.43.4.1515-1521.2005 | 2005 | |
| Phylogeny | New quadriplex PCR assay for detection of methicillin and mupirocin resistance and simultaneous discrimination of Staphylococcus aureus from coagulase-negative staphylococci. | Zhang K, Sparling J, Chow BL, Elsayed S, Hussain Z, Church DL, Gregson DB, Louie T, Conly JM. | J Clin Microbiol | 10.1128/jcm.42.11.4947-4955.2004 | 2004 | |
| Phylogeny | Identification of clinically relevant enterococcus species by direct sequencing of groES and spacer region. | Tsai JC, Hsueh PR, Lin HM, Chang HJ, Ho SW, Teng LJ. | J Clin Microbiol | 10.1128/jcm.43.1.235-241.2005 | 2005 | |
| Development of a PCR assay for rapid detection of enterococci. | Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.37.11.3497-3503.1999 | 1999 | ||
| Evidence for horizontal gene transfer in evolution of elongation factor Tu in enterococci. | Ke D, Boissinot M, Huletsky A, Picard FJ, Frenette J, Ouellette M, Roy PH, Bergeron MG. | J Bacteriol | 10.1128/jb.182.24.6913-6920.2000 | 2000 | ||
| Antimicrobial Resistance, Virulence Determinants, and Biofilm Formation of Enterococcus Species From Ready-to-Eat Seafood. | Igbinosa EO, Beshiru A. | Front Microbiol | 10.3389/fmicb.2019.00728 | 2019 | ||
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| AOAC-OMA/MicroVal Harmonized Validation of Peel PlateTM EB (Enterobacteriaceae Bacteria), First Action 2018.05. | Salter RS, Durbin GW, Martinez D, Bird P, Bastin B, Crowley E. | J AOAC Int | 10.1093/jaoacint/qsaa067 | 2020 | ||
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| Enzymology | Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples. | Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG. | Appl Environ Microbiol | 10.1128/aem.02337-10 | 2011 | |
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| Pathogenicity | New real-time PCR assay for rapid detection of methicillin-resistant Staphylococcus aureus directly from specimens containing a mixture of staphylococci. | Huletsky A, Giroux R, Rossbach V, Gagnon M, Vaillancourt M, Bernier M, Gagnon F, Truchon K, Bastien M, Picard FJ, van Belkum A, Ouellette M, Roy PH, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.42.5.1875-1884.2004 | 2004 | |
| Enzymology | Survival of indicator and pathogenic bacteria in bovine feces on pasture. | Sinton LW, Braithwaite RR, Hall CH, Mackenzie ML. | Appl Environ Microbiol | 10.1128/aem.01620-07 | 2007 | |
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| Analysis of genes encoding D-alanine-D-alanine ligase-related enzymes in Enterococcus casseliflavus and Enterococcus flavescens. | Navarro F, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.38.8.1788 | 1994 | ||
| Compilation of small ribosomal subunit RNA structures. | Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R. | Nucleic Acids Res | 10.1093/nar/21.13.3025 | 1993 | ||
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| Enzymology | Use of cephalexin-aztreonam-arabinose agar for selective isolation of Enterococcus faecium. | Ford M, Perry JD, Gould FK. | J Clin Microbiol | 10.1128/jcm.32.12.2999-3001.1994 | 1994 | |
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| A novel Enterococcus durans with antimicrobial, anti-diabetes and anti-alzheimer activities isolated from Egypt. | Arafat HH, Shoulkamy MA, Imam MM, Ali AMA. | AMB Express | 10.1186/s13568-025-01836-2 | 2025 | ||
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| Some Technological Properties of Lactic Acid Bacteria Isolated from Dahi and Datshi, Naturally Fermented Milk Products of Bhutan. | Shangpliang HN, Sharma S, Rai R, Tamang JP. | Front Microbiol | 10.3389/fmicb.2017.00116 | 2017 | ||
| Designing primers and evaluation of the efficiency of propidium monoazide - Quantitative polymerase chain reaction for counting the viable cells of Lactobacillus gasseri and Lactobacillus salivarius. | Lai CH, Wu SR, Pang JC, Ramireddy L, Chiang YC, Lin CK, Tsen HY. | J Food Drug Anal | 10.1016/j.jfda.2016.10.004 | 2017 | ||
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| Enzymology | Purification and characterization of enterocin 4, a bacteriocin produced by Enterococcus faecalis INIA 4. | Joosten HM, Nunez M, Devreese B, Van Beeumen J, Marugg JD. | Appl Environ Microbiol | 10.1128/aem.62.11.4220-4223.1996 | 1996 | |
| Pathogenicity | Purification, characterization, and lytic activity against Naegleria fowleri of two amoebicins produced by Bacillus licheniformis A12. | Galvez A, Valdivia E, Gonzalez-Segura A, Lebbadi M, Martinez-Bueno M, Maqueda M. | Appl Environ Microbiol | 10.1128/aem.59.5.1480-1486.1993 | 1993 | |
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| Genomic analysis of Enterococcus durans LAB18S, a potential probiotic strain isolated from cheese. | Comerlato CB, Prichula J, Siqueira FM, Ritter AC, Varela APM, Mayer FQ, Brandelli A. | Genet Mol Biol | 10.1590/1678-4685-gmb-2021-0201 | 2022 | ||
| Genetics | Genomic analysis of Enterococcus faecium strain RAOG174 associated with acute chorioamnionitis carried antibiotic resistance gene: is it time for precise microbiological identification for appropriate antibiotic use? | Pongchaikul P, Romero R, Mongkolsuk P, Vivithanaporn P, Wongsurawat T, Jenjaroenpun P, Nitayanon P, Thaipisuttikul I, Kamlungkuea T, Singsaneh A, Santanirand P, Chaemsaithong P. | BMC Genomics | 10.1186/s12864-023-09511-1 | 2023 | |
| Distribution, cholesterol-lowering and immunomodulation effects of lactic acid bacteria from fermented mussel (Hoi-dong). | Kingkaew E, Konno H, Hosaka Y, Phongsopitanun W, Tanasupawat S. | Heliyon | 10.1016/j.heliyon.2022.e12272 | 2022 | ||
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| Phylogeny | Methylobacterium planium sp. nov., isolated from a lichen sample. | Jiang L, An D, Wang X, Zhang K, Li G, Lang L, Wang L, Jiang C, Jiang Y. | Arch Microbiol | 10.1007/s00203-020-01881-4 | 2020 | |
| Phylogeny | Enterococcus Xinjiangensis sp. nov., Isolated from Yogurt of Xinjiang, China. | Ren X, Li M, Guo D | Curr Microbiol | 10.1007/s00284-016-1065-1 | 2016 | |
| Phylogeny | Enterococcus lactis sp. nov., from Italian raw milk cheeses. | Morandi S, Cremonesi P, Povolo M, Brasca M | Int J Syst Evol Microbiol | 10.1099/ijs.0.030825-0 | 2011 | |
| Phylogeny | Enterococcus thailandicus sp. nov., isolated from fermented sausage ('mum') in Thailand. | Tanasupawat S, Sukontasing S, Lee JS | Int J Syst Evol Microbiol | 10.1099/ijs.0.65535-0 | 2008 |
| #8979 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20633 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #37696 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #118979 | Collection of Institut Pasteur ; Curators of the CIP; CIP 55.125 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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