| [Ref.: #9002] |
Sample type/isolated from |
plant material |
| |
| [Ref.: #46854] |
Sample type/isolated from |
Plant material |
| [Ref.: #46854] |
Sampling date |
1984 |
| |
| [Ref.: #67770] |
Sample type/isolated from |
Plant material |
| |
| [Ref.: #117205] |
Sample type/isolated from |
Plant |
|
* marker position based on {}
|
|
Isolation sources categories |
|
 |
-
Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
| [Ref.: #9002] |
Enterococcus casseliflavus gene for 16S rRNA, partial sequence, strain: NBRC 100478 |
AB681176 |
1425 |
|
37734 tax ID |
| [Ref.: #124043] |
Enterococcus casseliflavus strain NBRC 100478 16S ribosomal RNA gene, partial sequence. |
MN526953 |
508 |
|
37734 tax ID |
* |
| [Ref.: #124043] |
Enterococcus casseliflavus strain NBRC 100478 16S ribosomal RNA gene, partial sequence. |
MN527270 |
508 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus 16S ribosomal RNA gene, partial sequence |
AF039903 |
1509 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus strain ATCC 25788 16S ribosomal RNA gene, partial sequence |
KC510229 |
814 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
E.casseliflavus 16S rRNA gene, partial (strain ATTC 25788 (CCUG 18657)) |
Y12908 |
366 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus strain CCUG 18657 clone 1 16S-23S ribosomal RNA intergenic spacer, partial sequence |
DQ204549 |
226 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus 16S rRNA gene, strain CECT969T |
AJ420804 |
1451 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus 16S rRNA gene, strain LMG 10745 |
AJ301826 |
1904 |
|
37734 tax ID |
* |
| [Ref.: #20218] |
Enterococcus casseliflavus 16S rRNA gene, strain NCIMB 11449 |
Y18161 |
1421 |
|
37734 tax ID |
* |
|
| [Ref.: #9002] |
GC-content |
43.4 mol% |
thermal denaturation, midpoint method (Tm) |
|
-
Availability in culture collections
External links
| [Ref.: #9002] |
Culture collection no. |
DSM 20680, ATCC 25788, CCM 2478, NCDO 2372, NCIB 11449, CCUG 18657, NCTC 12361, JCM 8723, CECT 969, CGMCC 1.9124, CIP 103018, KCTC 3638, LMG 10745, NBRC 100478, NCIMB 11449, NRRL B-3502, VTT E-97775 |
| [Ref.: #74766] |
SI-ID 363642
|
* |
 |
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
| Phylogeny |
Enterococcus casseliflavus KB1733 Isolated from a Traditional Japanese Pickle Induces Interferon-Lambda Production in Human Intestinal Epithelial Cells. |
Satomi S, Kokubu D, Inoue T, Sugiyama M, Mizokami M, Suzuki S, Murata K |
Microorganisms |
10.3390/microorganisms10040827 |
2022 |
* |
| Phylogeny |
Enterococcus innesii sp. nov., isolated from the wax moth Galleria mellonella. |
Gooch HCC, Kiu R, Rudder S, Baker DJ, Hall LJ, Maxwell A |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.005168 |
2021 |
* |
| Enzymology |
The vanC-3 vancomycin resistance gene cluster of Enterococcus flavescens CCM 439. |
Dutta I, Reynolds PE |
J Antimicrob Chemother |
10.1093/jac/dkg131 |
2003 |
* |
| Enzymology |
Nucleotide substitutions in vanC-2 gene of Enterococcus casseliflavus isolates obtained from chickens. |
Murase T, Mito Y, Otsuki K, Suzuki R, Yamai S |
Epidemiol Infect |
10.1017/s0950268802007501 |
2002 |
* |
| Metabolism |
Biochemical and genetic characterization of the vanC-2 vancomycin resistance gene cluster of Enterococcus casseliflavus ATCC 25788. |
Dutta I, Reynolds PE |
Antimicrob Agents Chemother |
10.1128/AAC.46.10.3125-3132.2002 |
2002 |
* |
| Enzymology |
Bacterial resistance to vancomycin: overproduction, purification, and characterization of VanC2 from Enterococcus casseliflavus as a D-Ala-D-Ser ligase. |
Park IS, Lin CH, Walsh CT |
Proc Natl Acad Sci U S A |
10.1073/pnas.94.19.10040 |
1997 |
* |
| Phylogeny |
DNA hybridization and contour-clamped homogeneous electric field electrophoresis for identification of enterococci to the species level. |
Donabedian S, Chow JW, Shlaes DM, Green M, Zervos MJ |
J Clin Microbiol |
10.1128/jcm.33.1.141-145.1995 |
1995 |
* |
| Phylogeny |
Resistance of Enterococcus faecium to neutrophil-mediated phagocytosis. |
Arduino RC, Jacques-Palaz K, Murray BE, Rakita RM |
Infect Immun |
10.1128/iai.62.12.5587-5594.1994 |
1994 |
* |
| Enzymology |
Analysis of genes encoding D-alanine-D-alanine ligase-related enzymes in Enterococcus casseliflavus and Enterococcus flavescens. |
Navarro F, Courvalin P |
Antimicrob Agents Chemother |
10.1128/AAC.38.8.1788 |
1994 |
* |
| Phylogeny |
Vancomycin susceptibility and identification of motile enterococci. |
Vincent S, Knight RG, Green M, Sahm DF, Shlaes DM |
J Clin Microbiol |
10.1128/jcm.29.10.2335-2337.1991 |
1991 |
* |
|
References
-
| #9002 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20680
|
-
-
-
| #38111 |
; Curators of the CIP;
|
-
| #46854 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 18657
|
-
-
| #67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
| #68371 |
Automatically annotated from API 50CH acid .
|
-
| #68379 |
Automatically annotated from API Coryne .
|
-
| #68381 |
Automatically annotated from API rID32STR .
|
-
| #68382 |
Automatically annotated from API zym .
|
-
| #69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
| #74766 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID363642.1 )
|
-
| #117205 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103018
|
-
| #124043 |
Isabel Schober, Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
|
-
-
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
|
|